BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5204.p (375 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777409.1| hypothetical protein Hsero_4030 [Herbaspiril... 625 e-177 ref|YP_003774182.1| hypothetical protein Hsero_0755 [Herbaspiril... 574 e-162 ref|YP_004750723.1| hypothetical protein CFU_0061 [Collimonas fu... 387 e-105 ref|YP_202153.1| hypothetical protein XOO3514 [Xanthomonas oryza... 323 4e-86 ref|ZP_02242297.1| hypothetical protein Xoryp_06380 [Xanthomonas... 318 1e-84 >ref|YP_003777409.1| hypothetical protein Hsero_4030 [Herbaspirillum seropedicae SmR1] gb|ADJ65501.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 375 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 315/375 (84%), Positives = 334/375 (89%) Query: 1 MKLPTLKSLLGVKPPTSAVDPLLKPVNDNHPGGEDLSFTADLDAIAEARRFDDPTLDQGE 60 MKLPTLKS LG K PT+ +D LLKP+++ HPGGEDLSFT DLDAIA+ARRFDDPTLDQGE Sbjct: 1 MKLPTLKSALGTKLPTTVIDVLLKPISNEHPGGEDLSFTTDLDAIAQARRFDDPTLDQGE 60 Query: 61 WVTDIKEADWIFVEQRCAQLIETRSKDLRLAVWYSEAACKTRGLRGLGDGFLLVAGLFDQ 120 WVTDIKEADW FVEQRCAQLIETRSKDLRLAVWY EAACKTRGLRGLGDGFLL+AGLFDQ Sbjct: 61 WVTDIKEADWSFVEQRCAQLIETRSKDLRLAVWYGEAACKTRGLRGLGDGFLLMAGLFDQ 120 Query: 121 FWDHLYPLSEDGDHDRRVGNLTWLLSRSVQMSREIPLTEGRGSAFSLLDFDAARTRAANA 180 FWDHLYPLSEDGDHDRRVGNLTWLLSRSVQMS EIPLTEGRGSAFSL DF++ARTRAANA Sbjct: 121 FWDHLYPLSEDGDHDRRVGNLTWLLSRSVQMSHEIPLTEGRGSAFSLFDFNSARTRAANA 180 Query: 181 ERIANEGGQPEEGIKLAVMESARKRSSHAFYEAMLADTQYCLQCLEQLEKSVDQRLGVDG 240 ERI NEGG PEEG+KLAVMESARKRSSHAFYEAML D QYC CLEQLE VD RLGVDG Sbjct: 181 ERIVNEGGLPEEGVKLAVMESARKRSSHAFYEAMLEDAQYCRHCLEQLENIVDHRLGVDG 240 Query: 241 PGFSSAREAITLVHDTIARFAADTGLRSVAPAEIAVADENTAAVAAQLSEQGSPVAAPVQ 300 PGFS+AREA LVHDTI RFAA+TGLRS AE + D + AAVAAQL+ G +A +Q Sbjct: 241 PGFSAAREATKLVHDTIVRFAAETGLRSAVSAESILIDGDDAAVAAQLTGSGGSASAVLQ 300 Query: 301 HQGPIRTRAEAIAQLRAVAEFFRRTEPHSPVAHLADKAAQWGEMPLHAWLKTVIKDNAAL 360 HQGPIRTRAEAI QLRAVAEFFRR+EPHSPVAHLADKAAQWGEMPLHAWL+TVIKD AAL Sbjct: 301 HQGPIRTRAEAIGQLRAVAEFFRRSEPHSPVAHLADKAAQWGEMPLHAWLRTVIKDGAAL 360 Query: 361 SHVEELLGLQPPPQD 375 SHVEELLGLQ P QD Sbjct: 361 SHVEELLGLQAPQQD 375 >ref|YP_003774182.1| hypothetical protein Hsero_0755 [Herbaspirillum seropedicae SmR1] gb|ADJ62274.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 375 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 299/375 (79%), Positives = 332/375 (88%) Query: 1 MKLPTLKSLLGVKPPTSAVDPLLKPVNDNHPGGEDLSFTADLDAIAEARRFDDPTLDQGE 60 MKLPTLKSLLG KP SA++PLL P+NDN P GEDLSFTADLDAIAEARRFDDPTLDQGE Sbjct: 1 MKLPTLKSLLGGKPAMSAIEPLLNPINDNAPAGEDLSFTADLDAIAEARRFDDPTLDQGE 60 Query: 61 WVTDIKEADWIFVEQRCAQLIETRSKDLRLAVWYSEAACKTRGLRGLGDGFLLVAGLFDQ 120 WV DIKEADW FVEQ CA+L+E RSKDLRLAVWYSEAACKTRGLRGLGDGFLLVAGLFD+ Sbjct: 61 WVIDIKEADWPFVEQHCARLLEGRSKDLRLAVWYSEAACKTRGLRGLGDGFLLVAGLFDR 120 Query: 121 FWDHLYPLSEDGDHDRRVGNLTWLLSRSVQMSREIPLTEGRGSAFSLLDFDAARTRAANA 180 FWD++YP SE+GDHD+RVGNLTWLL+RSV MSREI LTEGRGSA+SL+DF+AARTRAANA Sbjct: 121 FWDNMYPQSEEGDHDQRVGNLTWLLARSVAMSREIALTEGRGSAYSLIDFEAARTRAANA 180 Query: 181 ERIANEGGQPEEGIKLAVMESARKRSSHAFYEAMLADTQYCLQCLEQLEKSVDQRLGVDG 240 ERIANEGGQPEEG+KLAVME+ARKRSSHAFYEAMLAD+QYC+Q LEQLEKSVD RLGV+G Sbjct: 181 ERIANEGGQPEEGVKLAVMEAARKRSSHAFYEAMLADSQYCVQALEQLEKSVDARLGVNG 240 Query: 241 PGFSSAREAITLVHDTIARFAADTGLRSVAPAEIAVADENTAAVAAQLSEQGSPVAAPVQ 300 PGFS+AREA+ V +T+ARFAADTGLRS + A + A A S + +P A + Sbjct: 241 PGFSAAREALIAVRETVARFAADTGLRSPQLQDSAASGAAADASAPPTSVEETPPAGAMM 300 Query: 301 HQGPIRTRAEAIAQLRAVAEFFRRTEPHSPVAHLADKAAQWGEMPLHAWLKTVIKDNAAL 360 QGPIRTRAEAIAQLRAVAEFFRRTEPHSPVAHLADKAAQWGEMPLHAWLK+VIKD++ L Sbjct: 301 QQGPIRTRAEAIAQLRAVAEFFRRTEPHSPVAHLADKAAQWGEMPLHAWLKSVIKDDSTL 360 Query: 361 SHVEELLGLQPPPQD 375 SHVEELLGL PP ++ Sbjct: 361 SHVEELLGLLPPRRE 375 >ref|YP_004750723.1| hypothetical protein CFU_0061 [Collimonas fungivorans Ter331] gb|AEK59900.1| hypothetical protein CFU_0061 [Collimonas fungivorans Ter331] Length = 389 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 207/359 (57%), Positives = 262/359 (72%), Gaps = 4/359 (1%) Query: 18 AVDPLLKPVNDNHPGGEDLSFTADLDAIAEARRFDDPTLDQGEWVTDIKEADWIFVEQRC 77 +VD LL PV+D P G DLSF++DLDAIA ARRFDDP+LDQGEWVT++KEADW FV C Sbjct: 31 SVDQLLNPVSDAAPCGADLSFSSDLDAIANARRFDDPSLDQGEWVTELKEADWGFVVDNC 90 Query: 78 AQLIETRSKDLRLAVWYSEAACKTRGLRGLGDGFLLVAGLFDQFWDHLYPLSEDGDHDRR 137 A+LIET+SKDLRLAVW +EA K R GL DG+LL+AGL D++W+ L+P+ +D D + R Sbjct: 91 ARLIETQSKDLRLAVWLAEANAKVRHFGGLADGYLLLAGLSDRYWESLHPVPDDDDQELR 150 Query: 138 VGNLTWLLSRSVQMSREIPLTEGRGSAFSLLDFDAARTRAANAER-IANEGGQPEEGIKL 196 VGNL+WLLSRSV + REIP+TEGRG+AFS +DF++AR RAA+ ER AN EG+KL Sbjct: 151 VGNLSWLLSRSVHLIREIPITEGRGTAFSTVDFESARIRAASEERDRANGESVNSEGVKL 210 Query: 197 AVMESARKRSSHAFYEAMLADTQYCLQCLEQLEKSVDQRLGVDGPGFSSAREAITLVHDT 256 A +E+A+++SS FYE +LAD C Q L QLEKS+D R+G DGP FS+A++ + V Sbjct: 211 ADIEAAKRKSSPKFYEKLLADASLCQQALLQLEKSIDFRVGDDGPAFSAAKDTLENVIAV 270 Query: 257 IARFAADTGLRSVAPAEIAVADENTAAVAAQLSEQGSPVAAPVQHQGPIRTRAEAIAQLR 316 I RFA + G+ + A A + TA Q E A GPI+ RA+A+AQLR Sbjct: 271 ITRFAQEAGVNT-GSAPKASNETQTAPTVQQ--EVSKVEQAQATLNGPIQNRAQALAQLR 327 Query: 317 AVAEFFRRTEPHSPVAHLADKAAQWGEMPLHAWLKTVIKDNAALSHVEELLGLQPPPQD 375 VA+FFRRTEPHSPVA+LADKAA WG++PLH WL+TVIKD +L+HVEELLGL Q+ Sbjct: 328 HVADFFRRTEPHSPVAYLADKAASWGDLPLHHWLRTVIKDPGSLAHVEELLGLHGNQQN 386 >ref|YP_202153.1| hypothetical protein XOO3514 [Xanthomonas oryzae pv. oryzae KACC10331] gb|AAW76768.1| uncharacterized protein conserved in bacteria [Xanthomonas oryzae pv. oryzae KACC10331] Length = 353 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 172/349 (49%), Positives = 229/349 (65%), Gaps = 7/349 (2%) Query: 19 VDPLLKPVNDNHPGGEDLSFTADLDAIAEARRFDDPTLDQGEWVTDIKEADWIFVEQRCA 78 +D LL P++D+ P GEDLSF+ + D I EARR DDPTLDQGEW TDIK ADW V ++C Sbjct: 4 LDALLAPISDHQPAGEDLSFSIEFDRIQEARRSDDPTLDQGEWQTDIKYADWSSVARQCG 63 Query: 79 QLIETRSKDLRLAVWYSEAACKTRGLRGLGDGFLLVAGLFDQFWDHLYPLSEDGDHDRRV 138 L++TR+KDLRLA W +EA + G GL G+ L+AGL D++WD ++PL DGDH+ R+ Sbjct: 64 DLLQTRTKDLRLAGWMTEATTQIDGFAGLALGYRLIAGLCDRYWDEVHPLVVDGDHEERI 123 Query: 139 GNLTWLLSRSVQMSREIPLTEGRGSAFSLLDFDAARTRAANAERIANEGGQPEEGIKLAV 198 GNL+WLL+ S+ R +P+ G F L F+AA TR+ANA ++ GQP L + Sbjct: 124 GNLSWLLTNSLHWLRAVPIASGPQGRFGLNAFEAAHTRSANAGS-GDDEGQPS----LDL 178 Query: 199 MESARKRSSHAFYEAMLADTQYCLQCLEQLEKSVDQRLGVDGPGFSSAREAITLVHDTIA 258 +E+ R+ + H FY ++ C + L+ L+ +VD RLG+DGP FS+ RE + + T+A Sbjct: 179 LEAVRRDTPHDFYRQLVDALLNCAEALQSLQAAVDDRLGIDGPSFSAVREQVEHLQRTVA 238 Query: 259 RFAADTGLRSVAPAEIAVADENTAAVAAQLSEQGSPVAAPVQHQGPIRTRAEAIAQLRAV 318 RFA D GL AE D ++ P AP + G TR EA+AQLR V Sbjct: 239 RFARDAGLLLDGEAEAGPHDMPGIGFGPAANKDAPP--APREPGGAPTTRKEALAQLRQV 296 Query: 319 AEFFRRTEPHSPVAHLADKAAQWGEMPLHAWLKTVIKDNAALSHVEELL 367 AEFFRRTEPHSPVA+LA+KAA+WGEMPLH WLK VIKD + L+ +EE+L Sbjct: 297 AEFFRRTEPHSPVAYLAEKAARWGEMPLHVWLKRVIKDGSVLNQMEEML 345 >ref|ZP_02242297.1| hypothetical protein Xoryp_06380 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 357 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 231/351 (65%), Gaps = 7/351 (1%) Query: 19 VDPLLKPVNDNHPGGEDLSFTADLDAIAEARRFDDPTLDQGEWVTDIKEADWIFVEQRCA 78 +D LL P++D+ P GEDLSF+ + D I EARR DDPTLDQGEW TDIK ADW V ++C Sbjct: 4 LDALLAPISDHQPAGEDLSFSIEFDRIQEARRSDDPTLDQGEWQTDIKYADWSSVARQCG 63 Query: 79 QLIETRSKDLRLAVWYSEAACKTRGLRGLGDGFLLVAGLFDQFWDHLYPLSEDGDHDRRV 138 L++TR+KDLRLA W +EA + G GL G+ L+AGL D++WD ++PL DGDH+ R+ Sbjct: 64 DLLQTRTKDLRLAGWMTEATTQIDGFAGLALGYRLIAGLCDRYWDEVHPLVVDGDHEERI 123 Query: 139 GNLTWLLSRSVQMSREIPLTEGRGSAFSLLDFDAARTRAANAERIANEGGQPEEGIKLAV 198 GNL+WLL+ S+ R +P+ G F L F+AA TR+ANA ++ GQP L + Sbjct: 124 GNLSWLLTNSLHWLRAVPIASGPQGRFGLNAFEAAHTRSANAGS-GDDEGQPS----LDL 178 Query: 199 MESARKRSSHAFYEAMLADTQYCLQCLEQLEKSVDQRLGVDGPGFSSAREAITLVHDTIA 258 +E+ R+ + H FY ++ C + L+ L+ +VD RLG+DGP FS+ RE + + T+A Sbjct: 179 LEAVRRDTPHDFYRQLVDALLNCAEALQSLQAAVDDRLGIDGPSFSAVREQVEHLQRTVA 238 Query: 259 RFAADTGLRSVAPAEIAVADENTAAV--AAQLSEQGSPVAAPVQHQGPIRTRAEAIAQLR 316 RFA D GL AE D A AA +P AP + G TR EA+AQLR Sbjct: 239 RFARDAGLLLDGEAEAGQHDMPGIAFGPAANKDAPSAPPPAPREPGGAPTTRKEALAQLR 298 Query: 317 AVAEFFRRTEPHSPVAHLADKAAQWGEMPLHAWLKTVIKDNAALSHVEELL 367 VAEFFRRTEPHSPVA+LA+KAA+WGEMPLH WLK VIKD + L+ +EE+L Sbjct: 299 QVAEFFRRTEPHSPVAYLAEKAARWGEMPLHVWLKRVIKDGSVLNQMEEML 349