BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5203.p (211 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774183.1| outer membrane protein and related peptidogl... 352 2e-95 ref|YP_003777408.1| lipoprotein [Herbaspirillum seropedicae SmR1... 335 2e-90 ref|YP_004750722.1| outer membrane protein [Collimonas fungivora... 270 1e-70 ref|ZP_02364314.1| ompA family protein [Burkholderia oklahomensi... 249 2e-64 ref|ZP_06842759.1| OmpA/MotB domain protein [Burkholderia sp. Ch... 247 7e-64 >ref|YP_003774183.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [Herbaspirillum seropedicae SmR1] gb|ADJ62275.1| outer membrane protein and related peptidoglycan-associated (lipo)proteins [Herbaspirillum seropedicae SmR1] Length = 271 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 200/211 (94%), Positives = 207/211 (98%) Query: 1 MARLREIYGTDRVVDQIAVGQVVLPANWNNHVQKLISPNLKAVSRGQLKIDGTSVSISGE 60 +ARLRE+YG DRVVDQIAVGQVVLPANWNNHVQ LISPNLKAVSRGQLKIDGT+VSI+GE Sbjct: 61 LARLREVYGADRVVDQIAVGQVVLPANWNNHVQSLISPNLKAVSRGQLKIDGTTVSITGE 120 Query: 61 VSNEAQRQQIASDMASSLNSSYTVNNGLRVSTSEQGLLDNALANRVVAFESGQATLTPEG 120 V+NEAQRQQIASDMASSLNSSYTVNNGLRVSTSEQGLLDNALANRVV+FESGQATLTPEG Sbjct: 121 VANEAQRQQIASDMASSLNSSYTVNNGLRVSTSEQGLLDNALANRVVSFESGQATLTPEG 180 Query: 121 KRILDEIAATMLKLKGRHVEIIGNTDNEGLRASNISLSLARADAVKAYLSAKGVDESLLT 180 KRILDEIAATMLKLKGRHVEIIGNTDNEGLRASNISLSLARADAVKAYL AKGVDESLL+ Sbjct: 181 KRILDEIAATMLKLKGRHVEIIGNTDNEGLRASNISLSLARADAVKAYLGAKGVDESLLS 240 Query: 181 TSGQGPDRPVASNNTAEGRAKNRRIEFRIAK 211 TSGQGPDRPVASN TAEGRAKNRRIEFRIAK Sbjct: 241 TSGQGPDRPVASNATAEGRAKNRRIEFRIAK 271 >ref|YP_003777408.1| lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ65500.1| lipoprotein [Herbaspirillum seropedicae SmR1] Length = 267 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 187/211 (88%), Positives = 202/211 (95%) Query: 1 MARLREIYGTDRVVDQIAVGQVVLPANWNNHVQKLISPNLKAVSRGQLKIDGTSVSISGE 60 + RLRE+YG DRVVDQI+VG VVLPANWNNHVQKLISPNLKAV +GQLKIDGT+VSISGE Sbjct: 57 LTRLRELYGHDRVVDQISVGPVVLPANWNNHVQKLISPNLKAVRQGQLKIDGTNVSISGE 116 Query: 61 VSNEAQRQQIASDMASSLNSSYTVNNGLRVSTSEQGLLDNALANRVVAFESGQATLTPEG 120 VS+EAQRQQIASDMA+SLNSSY +NNGLRVSTSEQG+LDN LANRVV+FESG+ATLTPEG Sbjct: 117 VSHEAQRQQIASDMATSLNSSYIINNGLRVSTSEQGVLDNTLANRVVSFESGRATLTPEG 176 Query: 121 KRILDEIAATMLKLKGRHVEIIGNTDNEGLRASNISLSLARADAVKAYLSAKGVDESLLT 180 KRILDEIAATML+LKGR VEIIGNTDNEGLRASNISLSLARADAVKAYLS KGVD+SLLT Sbjct: 177 KRILDEIAATMLQLKGRRVEIIGNTDNEGLRASNISLSLARADAVKAYLSTKGVDDSLLT 236 Query: 181 TSGQGPDRPVASNNTAEGRAKNRRIEFRIAK 211 TSGQGPDRPVASN T+EGRA+NRRIEFRIAK Sbjct: 237 TSGQGPDRPVASNATSEGRARNRRIEFRIAK 267 >ref|YP_004750722.1| outer membrane protein [Collimonas fungivorans Ter331] gb|AEK59899.1| Outer membrane protein [Collimonas fungivorans Ter331] Length = 260 Score = 270 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 144/211 (68%), Positives = 182/211 (86%) Query: 1 MARLREIYGTDRVVDQIAVGQVVLPANWNNHVQKLISPNLKAVSRGQLKIDGTSVSISGE 60 +++L+E+YG DRVVDQI+VG VV PANWN +VQKLISP+LK VSRGQLKIDG +V+I+GE Sbjct: 50 LSKLQELYGADRVVDQISVGSVVSPANWNGYVQKLISPSLKQVSRGQLKIDGNTVTINGE 109 Query: 61 VSNEAQRQQIASDMASSLNSSYTVNNGLRVSTSEQGLLDNALANRVVAFESGQATLTPEG 120 VSNEAQRQQIAS++A +LN +YTV NGLRVS SEQ +LD LANR + FESGQATLTP G Sbjct: 110 VSNEAQRQQIASEIAGNLNPTYTVKNGLRVSASEQNVLDQTLANRTIEFESGQATLTPSG 169 Query: 121 KRILDEIAATMLKLKGRHVEIIGNTDNEGLRASNISLSLARADAVKAYLSAKGVDESLLT 180 RILDE++A +LK+K + VEIIG+TDN+GLRA N+SLS ARADAVK YL+ KG++ + Sbjct: 170 MRILDEMSAALLKVKDKKVEIIGHTDNQGLRARNVSLSKARADAVKDYLAQKGINPDSVV 229 Query: 181 TSGQGPDRPVASNNTAEGRAKNRRIEFRIAK 211 TSGQGPDRP+ +N+TA+GR++NRRIEFR+++ Sbjct: 230 TSGQGPDRPIMTNDTADGRSRNRRIEFRVSQ 260 >ref|ZP_02364314.1| ompA family protein [Burkholderia oklahomensis C6786] Length = 308 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 134/211 (63%), Positives = 165/211 (78%) Query: 1 MARLREIYGTDRVVDQIAVGQVVLPANWNNHVQKLISPNLKAVSRGQLKIDGTSVSISGE 60 + RLR+ YG VVDQI VG V P NW+ +VQKLI P LK +S+GQLKIDGT + + GE Sbjct: 98 LQRLRDTYGAANVVDQIEVGDVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQIDVKGE 157 Query: 61 VSNEAQRQQIASDMASSLNSSYTVNNGLRVSTSEQGLLDNALANRVVAFESGQATLTPEG 120 V NEAQRQQ+ASDMA++LN +YT+ NGLRVS SEQGLLD LANR + FE+G ATLTP+G Sbjct: 158 VHNEAQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQG 217 Query: 121 KRILDEIAATMLKLKGRHVEIIGNTDNEGLRASNISLSLARADAVKAYLSAKGVDESLLT 180 + ILD++A + K+ R VEIIG+TDN G RASNI+LS ARADAVK YL AKG+ LT Sbjct: 218 RAILDQMAGALAKMSSRTVEIIGHTDNSGNRASNIALSQARADAVKGYLVAKGIASQQLT 277 Query: 181 TSGQGPDRPVASNNTAEGRAKNRRIEFRIAK 211 T+G GPD+P+ASN+T +GRA+NRRIEFR + Sbjct: 278 TTGVGPDQPIASNDTNDGRARNRRIEFRAGQ 308 >ref|ZP_06842759.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] gb|EFG69718.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1] Length = 318 Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats. Identities = 131/208 (62%), Positives = 164/208 (78%) Query: 1 MARLREIYGTDRVVDQIAVGQVVLPANWNNHVQKLISPNLKAVSRGQLKIDGTSVSISGE 60 +ARLR+ YG VVDQI V V P NW+ +VQKLI P LK +S+GQLKIDGT + + GE Sbjct: 108 LARLRDTYGAANVVDQIEVADVATPPNWSANVQKLIGPQLKQISKGQLKIDGTQIDVKGE 167 Query: 61 VSNEAQRQQIASDMASSLNSSYTVNNGLRVSTSEQGLLDNALANRVVAFESGQATLTPEG 120 V NE+QRQQ+ASDMA++LN +YT+ NGLRVS SEQGLLD LANR + FE+G ATLTP+G Sbjct: 168 VHNESQRQQLASDMANALNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQG 227 Query: 121 KRILDEIAATMLKLKGRHVEIIGNTDNEGLRASNISLSLARADAVKAYLSAKGVDESLLT 180 + ILD++AA M+K+ + V IIG+TDN G R SNI+LS ARADAVK YL AKG+ +T Sbjct: 228 RAILDQMAAAMMKMTNKTVAIIGHTDNSGNRTSNIALSQARADAVKGYLVAKGIPPQQMT 287 Query: 181 TSGQGPDRPVASNNTAEGRAKNRRIEFR 208 T+G GPD+P+ASN+T +GRA+NRRIEFR Sbjct: 288 TTGVGPDQPIASNDTTDGRARNRRIEFR 315