BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5194.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002907923.1| hypothetical protein bglu_2g02160 [Burkholde... 325 6e-87 ref|YP_001581099.1| hypothetical protein Bmul_2918 [Burkholderia... 254 6e-66 ref|YP_001944827.1| hypothetical protein BMULJ_00316 [Burkholder... 254 6e-66 ref|YP_772282.1| hypothetical protein Bamb_0389 [Burkholderia am... 237 1e-60 ref|YP_622498.1| hypothetical protein Bcen_2627 [Burkholderia ce... 229 2e-58 >ref|YP_002907923.1| hypothetical protein bglu_2g02160 [Burkholderia glumae BGR1] gb|ACR30688.1| Hypothetical protein bglu_2g02160 [Burkholderia glumae BGR1] Length = 265 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 153/254 (60%), Positives = 190/254 (74%), Gaps = 1/254 (0%) Query: 1 MSVAIMKIAVGAMLVVLAGCDRFSSEPTYSGLSLEAFNYTPYNLDRFVIKDKYGNKGSGG 60 M I +I + + + LAGCD FSSEP YSG+S+E NYTP+NL +FVI+DKYGN SGG Sbjct: 1 MMSVIKRIILLFVALSLAGCDAFSSEPVYSGISVEGMNYTPFNLTKFVIRDKYGNTASGG 60 Query: 61 GDLPPGSGEGSLSCCHELKGTEFEVEWEAYDADIASRNLYAPIKKIKTTTKLSIPPTKMP 120 GDL PG+GEGSLSCC++LKGT+F V+WE YDAD A +N+YAPIKKI TT++ P TK+ Sbjct: 61 GDLMPGAGEGSLSCCYKLKGTDFTVDWEIYDADEAIKNIYAPIKKIHKTTQVHFPKTKIS 120 Query: 121 SGSGTRILGLHFYPDGHIEPEFRSDLGGSRFNYGAITYQIVTKYGPQINPVERLNSAEVF 180 G+G +L +HFYPD HIE EFR DL GSR +Y A+ Y TKYG NP + L+ A F Sbjct: 121 GGAGEVVLAVHFYPDYHIEFEFRDDLSGSRIDYSAVDYWFQTKYGKAANP-DGLDEASAF 179 Query: 181 RRTARLAGQGWIKYRLIDDADLEQYVYFTLLVNKNFDEHPQVKKILQETQGKPGAFATAT 240 RRTAR+A QGW+KYRL D ADLEQYVY+TLLVN FDEHP V++ILQET+GKPGAF A Sbjct: 180 RRTARVAAQGWLKYRLTDSADLEQYVYYTLLVNPKFDEHPAVQRILQETKGKPGAFGVAI 239 Query: 241 KNLSASDMAEIRKS 254 + L + + EI+ + Sbjct: 240 QKLPDTVVQEIKSN 253 >ref|YP_001581099.1| hypothetical protein Bmul_2918 [Burkholderia multivorans ATCC 17616] gb|ABX16602.1| hypothetical protein Bmul_2918 [Burkholderia multivorans ATCC 17616] Length = 568 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 131/246 (53%), Positives = 169/246 (68%), Gaps = 3/246 (1%) Query: 8 IAVGAMLVVLAGCDRFSSEPTYSGLSLEAFNYTPYNLDRFVIKDKYGNKGSGGGDLPPGS 67 +AV A ++L+ CD+ S EP Y GLS+E FNY PYNL RF + DKYGNK SGGGDL PGS Sbjct: 233 VAVLATAMLLSACDKPSPEPVYGGLSVEGFNYLPYNLTRFTVTDKYGNKASGGGDLIPGS 292 Query: 68 GEGSLSCCHELKGTEFEVEWEAYDADIASRNLYAPIKKIKTTTKLSIPPTKMPSGSGTRI 127 GEGS+SCC+ LKGTEF V+W YD D + YAP++KI T ++ +PPT+M +G I Sbjct: 293 GEGSVSCCYTLKGTEFTVDWTYYDID-KHVDPYAPLEKIHETARVHLPPTEMSGTAGETI 351 Query: 128 LGLHFYPDGHIEPEFRSDLGGSRFNYGAITYQIVTKYGPQINPVERLNSAEVFRRTARLA 187 LG+HFYPD H+E EFR DL G+R Y + + + +NP + E +RR ARLA Sbjct: 352 LGIHFYPDNHVELEFRHDLRGTRILYVEVWDWVRKHHKQLLNPSNDDEAVE-YRRAARLA 410 Query: 188 GQGWIKYRLIDDADLEQYVYFTLLVNKNFDEHPQVKKILQETQGKPGAFATATKNLSASD 247 GW +YRL D DL+QYVYFTLL N FDE+P V+KI+ ET+GKPGAF A +NLS Sbjct: 411 AAGWTRYRLTDTGDLQQYVYFTLL-NPGFDEYPAVRKIINETEGKPGAFGDAMQNLSPEV 469 Query: 248 MAEIRK 253 + +I++ Sbjct: 470 VNDIKR 475 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 6/186 (3%) Query: 2 SVAIMKIAVGAMLVV-LAGCDRFSSEPTYSGLSLEAFNYTPYNLDRFVIKDKYGNKGSGG 60 ++A+++IA +L + C + SEPTY +S EA NY PY L RF I D+YGN+ GG Sbjct: 44 TLAVLRIAAANLLFASITACSK--SEPTYVAVSTEALNYLPYKLVRFTITDQYGNRVRGG 101 Query: 61 GDLPPGSGEGSLSCCHELKGTEFEVEWEAYDADIASRNLYAPIKKIKTTTKLSIPPTKMP 120 GDL PG+GEGS++CC+ LKGT F+V+W YDAD +KK + S+ PT P Sbjct: 102 GDLEPGAGEGSIACCYSLKGTNFKVQWTYYDADDWRPG--EQVKKQQPEANASLAPTNAP 159 Query: 121 SGSGTRILGLHFYPDGHIEPEFRSD-LGGSRFNYGAITYQIVTKYGPQINPVERLNSAEV 179 G+RIL +HFYPD H+E F + LG +R ++ ++ +YG Q++ N ++ Sbjct: 160 DSIGSRILEIHFYPDHHVELAFPGEMLGSTRLPIVNVSRELTKRYGKQLDEKYGDNDVQL 219 Query: 180 FRRTAR 185 RR +R Sbjct: 220 HRRISR 225 >ref|YP_001944827.1| hypothetical protein BMULJ_00316 [Burkholderia multivorans ATCC 17616] dbj|BAG42291.1| hypothetical protein BMULJ_00316 [Burkholderia multivorans ATCC 17616] Length = 554 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 131/246 (53%), Positives = 169/246 (68%), Gaps = 3/246 (1%) Query: 8 IAVGAMLVVLAGCDRFSSEPTYSGLSLEAFNYTPYNLDRFVIKDKYGNKGSGGGDLPPGS 67 +AV A ++L+ CD+ S EP Y GLS+E FNY PYNL RF + DKYGNK SGGGDL PGS Sbjct: 219 VAVLATAMLLSACDKPSPEPVYGGLSVEGFNYLPYNLTRFTVTDKYGNKASGGGDLIPGS 278 Query: 68 GEGSLSCCHELKGTEFEVEWEAYDADIASRNLYAPIKKIKTTTKLSIPPTKMPSGSGTRI 127 GEGS+SCC+ LKGTEF V+W YD D + YAP++KI T ++ +PPT+M +G I Sbjct: 279 GEGSVSCCYTLKGTEFTVDWTYYDID-KHVDPYAPLEKIHETARVHLPPTEMSGTAGETI 337 Query: 128 LGLHFYPDGHIEPEFRSDLGGSRFNYGAITYQIVTKYGPQINPVERLNSAEVFRRTARLA 187 LG+HFYPD H+E EFR DL G+R Y + + + +NP + E +RR ARLA Sbjct: 338 LGIHFYPDNHVELEFRHDLRGTRILYVEVWDWVRKHHKQLLNPSNDDEAVE-YRRAARLA 396 Query: 188 GQGWIKYRLIDDADLEQYVYFTLLVNKNFDEHPQVKKILQETQGKPGAFATATKNLSASD 247 GW +YRL D DL+QYVYFTLL N FDE+P V+KI+ ET+GKPGAF A +NLS Sbjct: 397 AAGWTRYRLTDTGDLQQYVYFTLL-NPGFDEYPAVRKIINETEGKPGAFGDAMQNLSPEV 455 Query: 248 MAEIRK 253 + +I++ Sbjct: 456 VNDIKR 461 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 77/186 (41%), Positives = 112/186 (60%), Gaps = 6/186 (3%) Query: 2 SVAIMKIAVGAMLVV-LAGCDRFSSEPTYSGLSLEAFNYTPYNLDRFVIKDKYGNKGSGG 60 ++A+++IA +L + C + SEPTY +S EA NY PY L RF I D+YGN+ GG Sbjct: 30 TLAVLRIAAANLLFASITACSK--SEPTYVAVSTEALNYLPYKLVRFTITDQYGNRVRGG 87 Query: 61 GDLPPGSGEGSLSCCHELKGTEFEVEWEAYDADIASRNLYAPIKKIKTTTKLSIPPTKMP 120 GDL PG+GEGS++CC+ LKGT F+V+W YDAD +KK + S+ PT P Sbjct: 88 GDLEPGAGEGSIACCYSLKGTNFKVQWTYYDADDWRPG--EQVKKQQPEANASLAPTNAP 145 Query: 121 SGSGTRILGLHFYPDGHIEPEFRSD-LGGSRFNYGAITYQIVTKYGPQINPVERLNSAEV 179 G+RIL +HFYPD H+E F + LG +R ++ ++ +YG Q++ N ++ Sbjct: 146 DSIGSRILEIHFYPDHHVELAFPGEMLGSTRLPIVNVSRELTKRYGKQLDEKYGDNDVQL 205 Query: 180 FRRTAR 185 RR +R Sbjct: 206 HRRISR 211 >ref|YP_772282.1| hypothetical protein Bamb_0389 [Burkholderia ambifaria AMMD] gb|ABI85948.1| hypothetical protein Bamb_0389 [Burkholderia ambifaria AMMD] Length = 292 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 117/251 (46%), Positives = 162/251 (64%), Gaps = 5/251 (1%) Query: 2 SVAIMKIAVGAMLVVLAGCDRFSSEPTYSGLSLEAFNYTPYNLDRFVIKDKYGNKGSGGG 61 S A+ A G + V +A C + S+PTY+ +S EA NY PYNL RF I D++GNK GGG Sbjct: 16 SAALRVAAAGLLFVSMAACSK--SDPTYTSISTEALNYLPYNLVRFTITDQFGNKARGGG 73 Query: 62 DLPPGSGEGSLSCCHELKGTEFEVEWEAYDADIASRNLYAPIKKIKTTTKLSIPPTKMPS 121 DL PG+GEGS++CC+ LKGT+F+V+W YDAD +KK + T +S+PPTK P Sbjct: 74 DLEPGAGEGSIACCYLLKGTDFKVQWTYYDADDWRPG--EQVKKQQAETDVSLPPTKEPD 131 Query: 122 GSGTRILGLHFYPDGHIEPEFRSD-LGGSRFNYGAITYQIVTKYGPQINPVERLNSAEVF 180 G+RIL +HFYPD H+E F + LG +R ++ + +YG Q++ + N A+ Sbjct: 132 SIGSRILEVHFYPDRHVELAFPGEMLGSTRLPIVDVSRDLAKRYGKQLDKKYQDNDAQSH 191 Query: 181 RRTARLAGQGWIKYRLIDDADLEQYVYFTLLVNKNFDEHPQVKKILQETQGKPGAFATAT 240 RR +R + WIKYR D DLEQY Y+ LLVN FD HP+V+K++Q ++GKPGAFA A Sbjct: 192 RRISRTVAEAWIKYRFTDRGDLEQYAYYALLVNPRFDAHPEVQKLIQSSKGKPGAFAKAA 251 Query: 241 KNLSASDMAEI 251 LS + + E+ Sbjct: 252 AVLSPTVVKEL 262 >ref|YP_622498.1| hypothetical protein Bcen_2627 [Burkholderia cenocepacia AU 1054] ref|YP_834125.1| hypothetical protein Bcen2424_0478 [Burkholderia cenocepacia HI2424] gb|ABF77525.1| hypothetical protein Bcen_2627 [Burkholderia cenocepacia AU 1054] gb|ABK07232.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424] Length = 311 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 113/249 (45%), Positives = 158/249 (63%), Gaps = 5/249 (2%) Query: 4 AIMKIAVGAMLVVLAGCDRFSSEPTYSGLSLEAFNYTPYNLDRFVIKDKYGNKGSGGGDL 63 A+ A G + V +A C + S+PTY+ +S EA NY PYNL RF I D++GNK GGGDL Sbjct: 37 ALRVAAAGLLFVSMAACSK--SDPTYTSISTEALNYLPYNLVRFTITDQFGNKARGGGDL 94 Query: 64 PPGSGEGSLSCCHELKGTEFEVEWEAYDADIASRNLYAPIKKIKTTTKLSIPPTKMPSGS 123 PG+GEGS++CC+ LKG +F+V+W YDAD +KK + +S+PPTK P Sbjct: 95 EPGAGEGSIACCYLLKGNDFKVQWTYYDADDWRPG--EQVKKQQAEANVSLPPTKEPDSI 152 Query: 124 GTRILGLHFYPDGHIEPEFRSD-LGGSRFNYGAITYQIVTKYGPQINPVERLNSAEVFRR 182 G+RIL +HFYPD H+E F + LG +R ++ + +YG +++ N A+ RR Sbjct: 153 GSRILEVHFYPDHHVELVFPGEMLGSTRLPIVDVSRDLTKQYGKRLDKKYEDNDAQSHRR 212 Query: 183 TARLAGQGWIKYRLIDDADLEQYVYFTLLVNKNFDEHPQVKKILQETQGKPGAFATATKN 242 +R + WIKYR D +DLEQY Y+ LLVN FD HP V+K++Q ++GKPGAFA A Sbjct: 213 ISRTVAEAWIKYRFTDRSDLEQYAYYALLVNPRFDAHPAVQKLIQSSKGKPGAFAKAVAA 272 Query: 243 LSASDMAEI 251 LS + + E+ Sbjct: 273 LSPTVVKEL 281