BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5193.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002907923.1| hypothetical protein bglu_2g02160 [Burkholde... 309 3e-82 ref|YP_001944827.1| hypothetical protein BMULJ_00316 [Burkholder... 249 4e-64 ref|YP_001581099.1| hypothetical protein Bmul_2918 [Burkholderia... 248 4e-64 ref|YP_001807129.1| hypothetical protein BamMC406_0416 [Burkhold... 218 6e-55 ref|YP_772282.1| hypothetical protein Bamb_0389 [Burkholderia am... 217 2e-54 >ref|YP_002907923.1| hypothetical protein bglu_2g02160 [Burkholderia glumae BGR1] gb|ACR30688.1| Hypothetical protein bglu_2g02160 [Burkholderia glumae BGR1] Length = 265 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 143/238 (60%), Positives = 177/238 (74%), Gaps = 1/238 (0%) Query: 16 LALGGCDGFSSEPTYSGLSLEAFNYMPYNLDRFVIKDEYGNKGSGGGDLPPGSGEGSLTC 75 L+L GCD FSSEP YSG+S+E NY P+NL +FVI+D+YGN SGGGDL PG+GEGSL+C Sbjct: 15 LSLAGCDAFSSEPVYSGISVEGMNYTPFNLTKFVIRDKYGNTASGGGDLMPGAGEGSLSC 74 Query: 76 CYELKGTEFTVELMYYDLDVERKKATRNIDYIHASVKIHIPPTKLEGGAGTRILGLHFYP 135 CY+LKGT+FTV+ YD D K I IH + ++H P TK+ GGAG +L +HFYP Sbjct: 75 CYKLKGTDFTVDWEIYDADEAIKNIYAPIKKIHKTTQVHFPKTKISGGAGEVVLAVHFYP 134 Query: 136 DGHIEPEFRTDLGGSRFNYGAIDHRLVTKYGKQMNPDGQLDFFEVFRRTARIAGQGWIKY 195 D HIE EFR DL GSR +Y A+D+ TKYGK NPDG LD FRRTAR+A QGW+KY Sbjct: 135 DYHIEFEFRDDLSGSRIDYSAVDYWFQTKYGKAANPDG-LDEASAFRRTARVAAQGWLKY 193 Query: 196 RLIDDADLEQYVYFTLLVNKNFDQHPLVKKILKDTQGKRGEFAVAMNNLPTSVISEIR 253 RL D ADLEQYVY+TLLVN FD+HP V++IL++T+GK G F VA+ LP +V+ EI+ Sbjct: 194 RLTDSADLEQYVYYTLLVNPKFDEHPAVQRILQETKGKPGAFGVAIQKLPDTVVQEIK 251 >ref|YP_001944827.1| hypothetical protein BMULJ_00316 [Burkholderia multivorans ATCC 17616] dbj|BAG42291.1| hypothetical protein BMULJ_00316 [Burkholderia multivorans ATCC 17616] Length = 554 Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 127/248 (51%), Positives = 170/248 (68%), Gaps = 5/248 (2%) Query: 8 LLSAFAMILALGGCDGFSSEPTYSGLSLEAFNYMPYNLDRFVIKDEYGNKGSGGGDLPPG 67 +++ A + L CD S EP Y GLS+E FNY+PYNL RF + D+YGNK SGGGDL PG Sbjct: 218 VVAVLATAMLLSACDKPSPEPVYGGLSVEGFNYLPYNLTRFTVTDKYGNKASGGGDLIPG 277 Query: 68 SGEGSLTCCYELKGTEFTVELMYYDLDVERKKATRNIDYIHASVKIHIPPTKLEGGAGTR 127 SGEGS++CCY LKGTEFTV+ YYD+D + ++ IH + ++H+PPT++ G AG Sbjct: 278 SGEGSVSCCYTLKGTEFTVDWTYYDID-KHVDPYAPLEKIHETARVHLPPTEMSGTAGET 336 Query: 128 ILGLHFYPDGHIEPEFRTDLGGSRFNYGAIDHRLVTKYGKQ-MNPDGQLDFFEVFRRTAR 186 ILG+HFYPD H+E EFR DL G+R Y + V K+ KQ +NP + E +RR AR Sbjct: 337 ILGIHFYPDNHVELEFRHDLRGTRILYVEV-WDWVRKHHKQLLNPSNDDEAVE-YRRAAR 394 Query: 187 IAGQGWIKYRLIDDADLEQYVYFTLLVNKNFDQHPLVKKILKDTQGKRGEFAVAMNNLPT 246 +A GW +YRL D DL+QYVYFTLL N FD++P V+KI+ +T+GK G F AM NL Sbjct: 395 LAAAGWTRYRLTDTGDLQQYVYFTLL-NPGFDEYPAVRKIINETEGKPGAFGDAMQNLSP 453 Query: 247 SVISEIRK 254 V+++I++ Sbjct: 454 EVVNDIKR 461 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 5/181 (2%) Query: 7 KLLSAFAMILALGGCDGFSSEPTYSGLSLEAFNYMPYNLDRFVIKDEYGNKGSGGGDLPP 66 ++ +A + ++ C SEPTY +S EA NY+PY L RF I D+YGN+ GGGDL P Sbjct: 35 RIAAANLLFASITACS--KSEPTYVAVSTEALNYLPYKLVRFTITDQYGNRVRGGGDLEP 92 Query: 67 GSGEGSLTCCYELKGTEFTVELMYYDLDVERKKATRNIDYIHASVKIHIPPTKLEGGAGT 126 G+GEGS+ CCY LKGT F V+ YYD D R + + PT G+ Sbjct: 93 GAGEGSIACCYSLKGTNFKVQWTYYDADDWR--PGEQVKKQQPEANASLAPTNAPDSIGS 150 Query: 127 RILGLHFYPDGHIEPEFRTD-LGGSRFNYGAIDHRLVTKYGKQMNPDGQLDFFEVFRRTA 185 RIL +HFYPD H+E F + LG +R + L +YGKQ++ + ++ RR + Sbjct: 151 RILEIHFYPDHHVELAFPGEMLGSTRLPIVNVSRELTKRYGKQLDEKYGDNDVQLHRRIS 210 Query: 186 R 186 R Sbjct: 211 R 211 >ref|YP_001581099.1| hypothetical protein Bmul_2918 [Burkholderia multivorans ATCC 17616] gb|ABX16602.1| hypothetical protein Bmul_2918 [Burkholderia multivorans ATCC 17616] Length = 568 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 127/248 (51%), Positives = 170/248 (68%), Gaps = 5/248 (2%) Query: 8 LLSAFAMILALGGCDGFSSEPTYSGLSLEAFNYMPYNLDRFVIKDEYGNKGSGGGDLPPG 67 +++ A + L CD S EP Y GLS+E FNY+PYNL RF + D+YGNK SGGGDL PG Sbjct: 232 VVAVLATAMLLSACDKPSPEPVYGGLSVEGFNYLPYNLTRFTVTDKYGNKASGGGDLIPG 291 Query: 68 SGEGSLTCCYELKGTEFTVELMYYDLDVERKKATRNIDYIHASVKIHIPPTKLEGGAGTR 127 SGEGS++CCY LKGTEFTV+ YYD+D + ++ IH + ++H+PPT++ G AG Sbjct: 292 SGEGSVSCCYTLKGTEFTVDWTYYDID-KHVDPYAPLEKIHETARVHLPPTEMSGTAGET 350 Query: 128 ILGLHFYPDGHIEPEFRTDLGGSRFNYGAIDHRLVTKYGKQ-MNPDGQLDFFEVFRRTAR 186 ILG+HFYPD H+E EFR DL G+R Y + V K+ KQ +NP + E +RR AR Sbjct: 351 ILGIHFYPDNHVELEFRHDLRGTRILYVEV-WDWVRKHHKQLLNPSNDDEAVE-YRRAAR 408 Query: 187 IAGQGWIKYRLIDDADLEQYVYFTLLVNKNFDQHPLVKKILKDTQGKRGEFAVAMNNLPT 246 +A GW +YRL D DL+QYVYFTLL N FD++P V+KI+ +T+GK G F AM NL Sbjct: 409 LAAAGWTRYRLTDTGDLQQYVYFTLL-NPGFDEYPAVRKIINETEGKPGAFGDAMQNLSP 467 Query: 247 SVISEIRK 254 V+++I++ Sbjct: 468 EVVNDIKR 475 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 5/181 (2%) Query: 7 KLLSAFAMILALGGCDGFSSEPTYSGLSLEAFNYMPYNLDRFVIKDEYGNKGSGGGDLPP 66 ++ +A + ++ C SEPTY +S EA NY+PY L RF I D+YGN+ GGGDL P Sbjct: 49 RIAAANLLFASITACS--KSEPTYVAVSTEALNYLPYKLVRFTITDQYGNRVRGGGDLEP 106 Query: 67 GSGEGSLTCCYELKGTEFTVELMYYDLDVERKKATRNIDYIHASVKIHIPPTKLEGGAGT 126 G+GEGS+ CCY LKGT F V+ YYD D R + + PT G+ Sbjct: 107 GAGEGSIACCYSLKGTNFKVQWTYYDADDWR--PGEQVKKQQPEANASLAPTNAPDSIGS 164 Query: 127 RILGLHFYPDGHIEPEFRTD-LGGSRFNYGAIDHRLVTKYGKQMNPDGQLDFFEVFRRTA 185 RIL +HFYPD H+E F + LG +R + L +YGKQ++ + ++ RR + Sbjct: 165 RILEIHFYPDHHVELAFPGEMLGSTRLPIVNVSRELTKRYGKQLDEKYGDNDVQLHRRIS 224 Query: 186 R 186 R Sbjct: 225 R 225 >ref|YP_001807129.1| hypothetical protein BamMC406_0416 [Burkholderia ambifaria MC40-6] gb|ACB62913.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6] Length = 311 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 104/247 (42%), Positives = 148/247 (59%), Gaps = 5/247 (2%) Query: 7 KLLSAFAMILALGGCDGFSSEPTYSGLSLEAFNYMPYNLDRFVIKDEYGNKGSGGGDLPP 66 ++ +A M +++ C +EPTY+ +S EA NY+PYNL RF I D++GNK GGGDL P Sbjct: 39 RVAAASMMFVSIAACS--KTEPTYTSVSTEALNYLPYNLVRFTITDQFGNKARGGGDLEP 96 Query: 67 GSGEGSLTCCYELKGTEFTVELMYYDLDVERKKATRNIDYIHASVKIHIPPTKLEGGAGT 126 G+GEGS+TCCY LKGTEF V+ +YYD D R + + +PP + G+ Sbjct: 97 GTGEGSITCCYLLKGTEFKVQWIYYDADDWR--PGEQVKKQQGETSVSLPPAAVPDSIGS 154 Query: 127 RILGLHFYPDGHIEPEFRTD-LGGSRFNYGAIDHRLVTKYGKQMNPDGQLDFFEVFRRTA 185 RIL +HFYPD H+E F LG +R + L +Y ++ + + ++ RR + Sbjct: 155 RILEVHFYPDRHVELSFPGQILGSTRLPIVDVSRDLTKRYANRLEKRYEDNDAQLHRRIS 214 Query: 186 RIAGQGWIKYRLIDDADLEQYVYFTLLVNKNFDQHPLVKKILKDTQGKRGEFAVAMNNLP 245 R+ Q W+KYR + +DLEQY Y+ LLVN FD HP V K++K +GK G FA A+ LP Sbjct: 215 RVVAQAWLKYRFTNRSDLEQYAYYVLLVNPRFDAHPEVHKLIKSCKGKPGAFAKAVATLP 274 Query: 246 TSVISEI 252 +V E+ Sbjct: 275 AAVTKEL 281 >ref|YP_772282.1| hypothetical protein Bamb_0389 [Burkholderia ambifaria AMMD] gb|ABI85948.1| hypothetical protein Bamb_0389 [Burkholderia ambifaria AMMD] Length = 292 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 107/247 (43%), Positives = 150/247 (60%), Gaps = 5/247 (2%) Query: 7 KLLSAFAMILALGGCDGFSSEPTYSGLSLEAFNYMPYNLDRFVIKDEYGNKGSGGGDLPP 66 ++ +A + +++ C S+PTY+ +S EA NY+PYNL RF I D++GNK GGGDL P Sbjct: 20 RVAAAGLLFVSMAACS--KSDPTYTSISTEALNYLPYNLVRFTITDQFGNKARGGGDLEP 77 Query: 67 GSGEGSLTCCYELKGTEFTVELMYYDLDVERKKATRNIDYIHASVKIHIPPTKLEGGAGT 126 G+GEGS+ CCY LKGT+F V+ YYD D R + A + +PPTK G+ Sbjct: 78 GAGEGSIACCYLLKGTDFKVQWTYYDADDWR--PGEQVKKQQAETDVSLPPTKEPDSIGS 135 Query: 127 RILGLHFYPDGHIEPEFRTD-LGGSRFNYGAIDHRLVTKYGKQMNPDGQLDFFEVFRRTA 185 RIL +HFYPD H+E F + LG +R + L +YGKQ++ Q + + RR + Sbjct: 136 RILEVHFYPDRHVELAFPGEMLGSTRLPIVDVSRDLAKRYGKQLDKKYQDNDAQSHRRIS 195 Query: 186 RIAGQGWIKYRLIDDADLEQYVYFTLLVNKNFDQHPLVKKILKDTQGKRGEFAVAMNNLP 245 R + WIKYR D DLEQY Y+ LLVN FD HP V+K+++ ++GK G FA A L Sbjct: 196 RTVAEAWIKYRFTDRGDLEQYAYYALLVNPRFDAHPEVQKLIQSSKGKPGAFAKAAAVLS 255 Query: 246 TSVISEI 252 +V+ E+ Sbjct: 256 PTVVKEL 262