BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5189.p (163 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774194.1| hypothetical protein Hsero_0767 [Herbaspiril... 160 6e-38 ref|YP_003774192.1| hypothetical protein Hsero_0765 [Herbaspiril... 121 4e-26 gb|AAW76763.1| hypothetical protein XOO3509 [Xanthomonas oryzae ... 117 4e-25 ref|YP_452339.1| hypothetical protein XOO_3310 [Xanthomonas oryz... 117 6e-25 ref|YP_202149.1| hypothetical protein XOO3510 [Xanthomonas oryza... 115 2e-24 >ref|YP_003774194.1| hypothetical protein Hsero_0767 [Herbaspirillum seropedicae SmR1] gb|ADJ62286.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 165 Score = 160 bits (405), Expect = 6e-38, Method: Composition-based stats. Identities = 77/153 (50%), Positives = 103/153 (67%), Gaps = 2/153 (1%) Query: 12 LLHMLLLSLLIMLGGCEAKEEP--ELGMELVGYNHTVFGISDFDVTVIPGKRTAGGYIAA 69 LL ++ L++L ++ GC E P + + LV YNH GI++FDV V G ++ GGY+ A Sbjct: 12 LLSIVALAMLAIVSGCSNAEAPAARMTLNLVPYNHMTDGIANFDVQVKGGSKSGGGYLHA 71 Query: 70 GQGGGGYICCISVPKNWRAGLMANVNVRTVNGAGQPVERSWSVPVPQYASEQAGHFSVHF 129 G GGG ICC+S+P+ W+ GL A V +G+ + + VP+P+Y EQAGH SVHF Sbjct: 72 GSGGGSMICCVSIPEKWQPGLTAKVTAEVYRSSGEKYDIAKEVPIPEYTREQAGHLSVHF 131 Query: 130 LRDGQVKVFATNLALWHPDYPLKGPEAELKPGS 162 LRDG+VK+F T ALWHPDYPLKG EAELKP + Sbjct: 132 LRDGEVKIFVTRYALWHPDYPLKGREAELKPAA 164 >ref|YP_003774192.1| hypothetical protein Hsero_0765 [Herbaspirillum seropedicae SmR1] gb|ADJ62284.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 161 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 72/159 (45%), Positives = 97/159 (61%), Gaps = 2/159 (1%) Query: 1 MEYITKMAGKSLLHMLLLSLLIMLGGCEAKEEPELGMELVGYNHTVFGISDFDVTVIPGK 60 M+ ++ A S+ +LLL++LI E++ E M+ YNHT I DF+ G+ Sbjct: 1 MKALSAKARASISVLLLLAMLIGCKDAESRGE-NYTMDFGAYNHTDHSIDDFEFQFKGGQ 59 Query: 61 RTAGGYIAAGQGGGGYICCISVPKNWRAGLMANVNVRTVNGAGQPVERSWSVPVPQYASE 120 R AGG++ G+GGG ICC SVP W L V +GAG S VP+P+YAS+ Sbjct: 60 RAAGGFVGKGEGGGD-ICCASVPMQWTPTLTVQVRASWKDGAGVVQAISREVPLPRYASK 118 Query: 121 QAGHFSVHFLRDGQVKVFATNLALWHPDYPLKGPEAELK 159 AGH +HFLR+G+VKVF T+LA WHPDYPL+G + ELK Sbjct: 119 DAGHLDIHFLRNGEVKVFVTSLATWHPDYPLQGKDVELK 157 >gb|AAW76763.1| hypothetical protein XOO3509 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 202 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 85/146 (58%), Gaps = 13/146 (8%) Query: 16 LLLSLLIMLGGCEAKEEPELGMELVGYNHTVFGISDFDVTVIPGKRTAGGYIAAGQGGGG 75 +LL LL L C + +G+ LVGYNHT I F V + GG++ A +GGGG Sbjct: 61 ILLGLLPCLAACG---QESVGVNLVGYNHTDKDIGHFTV-----DGSEGGFLQANRGGGG 112 Query: 76 YICCISVPKNWRAGLMANVNVRTVNGAGQPVERSWSVPVPQYASEQAGHFSVHFLRDGQV 135 + CCI +PK W+ G+ V R +PVP+YA + G +VHFLR+GQ+ Sbjct: 113 FACCIDIPKPWKPGMTVTVGWTDDYDENYQERR---LPVPRYA--KYGDMAVHFLRNGQI 167 Query: 136 KVFATNLALWHPDYPLKGPEAELKPG 161 KVF T ALWHPDYPLKG EAEL PG Sbjct: 168 KVFVTMYALWHPDYPLKGKEAELTPG 193 >ref|YP_452339.1| hypothetical protein XOO_3310 [Xanthomonas oryzae pv. oryzae MAFF 311018] ref|YP_202148.6| hypothetical protein XOO3509 [Xanthomonas oryzae pv. oryzae KACC10331] dbj|BAE70065.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 154 Score = 117 bits (293), Expect = 6e-25, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 85/146 (58%), Gaps = 13/146 (8%) Query: 16 LLLSLLIMLGGCEAKEEPELGMELVGYNHTVFGISDFDVTVIPGKRTAGGYIAAGQGGGG 75 +LL LL L C + +G+ LVGYNHT I F V + GG++ A +GGGG Sbjct: 13 ILLGLLPCLAACG---QESVGVNLVGYNHTDKDIGHFTV-----DGSEGGFLQANRGGGG 64 Query: 76 YICCISVPKNWRAGLMANVNVRTVNGAGQPVERSWSVPVPQYASEQAGHFSVHFLRDGQV 135 + CCI +PK W+ G+ V R +PVP+YA + G +VHFLR+GQ+ Sbjct: 65 FACCIDIPKPWKPGMTVTVGWTDDYDENYQERR---LPVPRYA--KYGDMAVHFLRNGQI 119 Query: 136 KVFATNLALWHPDYPLKGPEAELKPG 161 KVF T ALWHPDYPLKG EAEL PG Sbjct: 120 KVFVTMYALWHPDYPLKGKEAELTPG 145 >ref|YP_202149.1| hypothetical protein XOO3510 [Xanthomonas oryzae pv. oryzae KACC10331] gb|AAW76764.1| hypothetical protein XOO3510 [Xanthomonas oryzae pv. oryzae KACC10331] Length = 154 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 66/146 (45%), Positives = 84/146 (57%), Gaps = 13/146 (8%) Query: 16 LLLSLLIMLGGCEAKEEPELGMELVGYNHTVFGISDFDVTVIPGKRTAGGYIAAGQGGGG 75 +LL LL L C + +G+ LVGYNHT I F V + GG++ A +GGG Sbjct: 13 ILLGLLPCLAACG---QESVGVNLVGYNHTDKDIGHFTV-----DGSEGGFLQANRGGGK 64 Query: 76 YICCISVPKNWRAGLMANVNVRTVNGAGQPVERSWSVPVPQYASEQAGHFSVHFLRDGQV 135 + CCI +PK W+ G+ V R VPVP+Y ++ G +VHFLR+GQ+ Sbjct: 65 FACCIDIPKPWKPGMTVTVGWTDDYDENYQERR---VPVPRY--DKYGDMAVHFLRNGQI 119 Query: 136 KVFATNLALWHPDYPLKGPEAELKPG 161 KVF T ALWHPDYPLKG EAEL PG Sbjct: 120 KVFVTMYALWHPDYPLKGKEAELTPG 145