BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5181.p (251 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777393.1| branched-chain amino acid ABC transporter AT... 423 e-116 ref|ZP_06686376.1| branched-chain amino acid ABC superfamily ATP... 301 5e-80 ref|YP_003977557.1| ABC transporter [Achromobacter xylosoxidans ... 300 1e-79 gb|EFV82573.1| branched-chain amino acid transport system protei... 298 7e-79 gb|EGP45125.1| ABC transporter family protein 25 [Achromobacter ... 297 8e-79 >ref|YP_003777393.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65485.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 251 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 241/251 (96%), Positives = 250/251 (99%) Query: 1 MSELVLDVAQLRASYGKVQALHDINLKLERGSIATVIGPNGAGKSTLLNAIMGVLPAQGT 60 MSELVLDVAQLRASYGKVQALHDI+LKLERGSIATVIGPNGAGKSTLLNAIMGVLPAQGT Sbjct: 1 MSELVLDVAQLRASYGKVQALHDIHLKLERGSIATVIGPNGAGKSTLLNAIMGVLPAQGT 60 Query: 61 VRYQGKPVERWSLEQRVMAGIALVPERRELFSTMSVEDNLLLGGFRRLRLRQAQPLDQLA 120 VRYQG+ VERWSLEQRVMAGIALVPERRELFSTMSVEDNLLLGGFRRLRLRQAQPLDQLA Sbjct: 61 VRYQGRSVERWSLEQRVMAGIALVPERRELFSTMSVEDNLLLGGFRRLRLRQAQPLDQLA 120 Query: 121 TVFELFPRLKERRAQQAGTLSGGERQMLAIGRAMMAKPELLMLDEPSLGLAPRIVKEILH 180 TVF+LFPRLKERR+QQAGTLSGGERQMLAIGRAMMAKP+LLMLDEPSLGLAPRIVKEILH Sbjct: 121 TVFDLFPRLKERRSQQAGTLSGGERQMLAIGRAMMAKPQLLMLDEPSLGLAPRIVKEILH 180 Query: 181 IVSELRTAGISVLLVEQNARAALQTADYGYVLELGKVTMQGQSAKLAGDPQVIQAYLGFG 240 IVSELRTAGISVLLVEQNARAALQTADYGYVLELGKVT+QG+SA+LAGDPQVIQAYLGFG Sbjct: 181 IVSELRTAGISVLLVEQNARAALQTADYGYVLELGKVTLQGESAQLAGDPQVIQAYLGFG 240 Query: 241 KKAEAEVVAAS 251 KKA+AEVVAAS Sbjct: 241 KKAQAEVVAAS 251 >ref|ZP_06686376.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gb|EFF76722.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 253 Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats. Identities = 168/246 (68%), Positives = 197/246 (80%), Gaps = 4/246 (1%) Query: 5 VLDVAQLRASYGKVQALHDINLKLERGSIATVIGPNGAGKSTLLNAIMGVLP----AQGT 60 VL+V+ L A YGKV AL +L + GSI TVIG NGAGKST+LNA+MG LP A GT Sbjct: 8 VLEVSNLSARYGKVGALVGASLTVPAGSIVTVIGANGAGKSTMLNAMMGSLPHTGHAAGT 67 Query: 61 VRYQGKPVERWSLEQRVMAGIALVPERRELFSTMSVEDNLLLGGFRRLRLRQAQPLDQLA 120 V+Y G V W +E+RV AG++LVPERRELF TMSVEDNLLLGGFRR R R+A D L Sbjct: 68 VQYAGADVSGWQVERRVAAGMSLVPERRELFGTMSVEDNLLLGGFRRYRAREAGWRDTLN 127 Query: 121 TVFELFPRLKERRAQQAGTLSGGERQMLAIGRAMMAKPELLMLDEPSLGLAPRIVKEILH 180 VF+LFPRL+ERR QQAGTLSGGERQMLA+GRA+MAKP LLMLDEPSLGLAPRIV+EI H Sbjct: 128 EVFDLFPRLRERRGQQAGTLSGGERQMLAVGRALMAKPNLLMLDEPSLGLAPRIVREIFH 187 Query: 181 IVSELRTAGISVLLVEQNARAALQTADYGYVLELGKVTMQGQSAKLAGDPQVIQAYLGFG 240 I++ LR G+++LLVEQNARAALQ ADYGYVLE G+V + G + +LAGDP+VI++YLG G Sbjct: 188 IIARLRETGVAILLVEQNARAALQVADYGYVLETGEVILHGPARELAGDPKVIESYLGLG 247 Query: 241 KKAEAE 246 K AE E Sbjct: 248 KGAEKE 253 >ref|YP_003977557.1| ABC transporter [Achromobacter xylosoxidans A8] gb|ADP14842.1| ABC transporter family protein 25 [Achromobacter xylosoxidans A8] Length = 250 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 168/248 (67%), Positives = 197/248 (79%), Gaps = 4/248 (1%) Query: 1 MSELVLDVAQLRASYGKVQALHDINLKLERGSIATVIGPNGAGKSTLLNAIMGVLP---- 56 MS VL+V L A YGKV AL +L + GSI TVIG NGAGKST+LNA+MG LP Sbjct: 1 MSAPVLEVTNLSARYGKVGALVGASLTVPAGSIVTVIGANGAGKSTMLNAMMGALPQTGH 60 Query: 57 AQGTVRYQGKPVERWSLEQRVMAGIALVPERRELFSTMSVEDNLLLGGFRRLRLRQAQPL 116 A GTV+Y G V W +E+RV AG++LVPERRELF TMSVEDNLLLGGFRR R R++ Sbjct: 61 AAGTVQYAGTDVSGWQVERRVAAGMSLVPERRELFGTMSVEDNLLLGGFRRYRARESGWR 120 Query: 117 DQLATVFELFPRLKERRAQQAGTLSGGERQMLAIGRAMMAKPELLMLDEPSLGLAPRIVK 176 D L VF+LFPRL+ERRAQQAGTLSGGERQMLA+GRA+MAKP LLMLDEPSLGLAPRIV+ Sbjct: 121 DTLNEVFDLFPRLRERRAQQAGTLSGGERQMLAVGRALMAKPNLLMLDEPSLGLAPRIVR 180 Query: 177 EILHIVSELRTAGISVLLVEQNARAALQTADYGYVLELGKVTMQGQSAKLAGDPQVIQAY 236 EI HI++ LR G+++LLVEQNARAALQ ADYGYVLE G+V + G + +LAGDP+VI++Y Sbjct: 181 EIFHIIARLRETGVAILLVEQNARAALQVADYGYVLETGEVILHGPARELAGDPKVIESY 240 Query: 237 LGFGKKAE 244 LG GK E Sbjct: 241 LGLGKGGE 248 >gb|EFV82573.1| branched-chain amino acid transport system protein [Achromobacter xylosoxidans C54] Length = 254 Score = 298 bits (762), Expect = 7e-79, Method: Composition-based stats. Identities = 166/247 (67%), Positives = 198/247 (80%), Gaps = 4/247 (1%) Query: 2 SELVLDVAQLRASYGKVQALHDINLKLERGSIATVIGPNGAGKSTLLNAIMGVLP----A 57 S+ VL+V+ L A YGKV AL L + GSI TVIG NGAGKST+LNA+MG LP A Sbjct: 4 SKPVLEVSNLSARYGKVGALAGATLTVPAGSIVTVIGANGAGKSTMLNAMMGSLPQTGHA 63 Query: 58 QGTVRYQGKPVERWSLEQRVMAGIALVPERRELFSTMSVEDNLLLGGFRRLRLRQAQPLD 117 G+V+Y G V W +E+RV AG++LVPERRELF +MSVEDNLLLGGFRR R R++ D Sbjct: 64 AGSVQYAGTDVSSWPVERRVAAGMSLVPERRELFGSMSVEDNLLLGGFRRYRARESGWRD 123 Query: 118 QLATVFELFPRLKERRAQQAGTLSGGERQMLAIGRAMMAKPELLMLDEPSLGLAPRIVKE 177 L VF+LFPRL+ERRAQQAGTLSGGERQMLA+GRA+MAKP LLMLDEPSLGLAPRIV+E Sbjct: 124 TLNEVFDLFPRLRERRAQQAGTLSGGERQMLAVGRALMAKPALLMLDEPSLGLAPRIVRE 183 Query: 178 ILHIVSELRTAGISVLLVEQNARAALQTADYGYVLELGKVTMQGQSAKLAGDPQVIQAYL 237 I HI++ LR G+++LLVEQNARAALQ ADYGYVLE G+V + G + +LAGDP+VI++YL Sbjct: 184 IFHIIARLRETGVAILLVEQNARAALQVADYGYVLETGEVILHGPARELAGDPKVIESYL 243 Query: 238 GFGKKAE 244 G GK AE Sbjct: 244 GLGKGAE 250 >gb|EGP45125.1| ABC transporter family protein 25 [Achromobacter xylosoxidans AXX-A] Length = 254 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 166/247 (67%), Positives = 197/247 (79%), Gaps = 4/247 (1%) Query: 2 SELVLDVAQLRASYGKVQALHDINLKLERGSIATVIGPNGAGKSTLLNAIMGVLP----A 57 S+ VL+V L A YGKV AL L + GSI TVIG NGAGKST+LNA+MG LP A Sbjct: 4 SKPVLEVTNLSARYGKVGALAGATLTVPAGSIVTVIGANGAGKSTMLNAMMGALPQTGHA 63 Query: 58 QGTVRYQGKPVERWSLEQRVMAGIALVPERRELFSTMSVEDNLLLGGFRRLRLRQAQPLD 117 G+V+Y G V W +E+RV AG++LVPERRELF +MSVEDNLLLGGFRR R R++ D Sbjct: 64 AGSVQYAGTDVSSWPVERRVAAGMSLVPERRELFGSMSVEDNLLLGGFRRYRARESGWRD 123 Query: 118 QLATVFELFPRLKERRAQQAGTLSGGERQMLAIGRAMMAKPELLMLDEPSLGLAPRIVKE 177 L VF+LFPRL+ERRAQQAGTLSGGERQMLA+GRA+MAKP LLMLDEPSLGLAPRIV+E Sbjct: 124 TLNEVFDLFPRLRERRAQQAGTLSGGERQMLAVGRALMAKPALLMLDEPSLGLAPRIVRE 183 Query: 178 ILHIVSELRTAGISVLLVEQNARAALQTADYGYVLELGKVTMQGQSAKLAGDPQVIQAYL 237 I HI++ LR G+++LLVEQNARAALQ ADYGYVLE G+V + G + +LAGDP+VI++YL Sbjct: 184 IFHIIARLRETGVAILLVEQNARAALQVADYGYVLETGEVILHGPARELAGDPKVIESYL 243 Query: 238 GFGKKAE 244 G GK AE Sbjct: 244 GLGKGAE 250