BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5167.p         (202 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777381.1| 3-oxoadipate CoA-transferase subunit A [Herb...   378   e-103
ref|YP_001074097.1| 3-oxoadipate CoA-transferase subunit A [Burk...   345   3e-93
ref|ZP_04969376.1| 3-oxoadipate CoA-transferase, A subunit [Burk...   344   5e-93
ref|ZP_02884232.1| 3-oxoacid CoA-transferase, A subunit [Burkhol...   343   7e-93
ref|ZP_03454788.1| 3-oxoadipate CoA-transferase, A subunit [Burk...   343   9e-93

>ref|YP_003777381.1| 3-oxoadipate CoA-transferase subunit A [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ65473.1| 3-oxoadipate CoA-transferase subunit A protein [Herbaspirillum
           seropedicae SmR1]
          Length = 224

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 190/202 (94%), Positives = 199/202 (98%)

Query: 1   MIGGFGNAGMPSALIDALIAEGARDLTIVNNNAGNGDTGLAALLKTKRVKKIICSFPRQT 60
           MIGGFGNAGMPSALIDALIA+GARDLTIVNNNAGNG+TGLAALLKTKRVKKI+CSFPRQ+
Sbjct: 23  MIGGFGNAGMPSALIDALIAQGARDLTIVNNNAGNGETGLAALLKTKRVKKIVCSFPRQS 82

Query: 61  DSHVFDALYRAGEIELELTPQGNLAERIRAAGAGIGGFFSPTGYGTMLAEGKETRLIDGK 120
           DS VFDALYR+GEIELELTPQGNLAERIRAAGAGIGGFFSPTGYGTMLAEGKETR I+G+
Sbjct: 83  DSQVFDALYRSGEIELELTPQGNLAERIRAAGAGIGGFFSPTGYGTMLAEGKETREINGR 142

Query: 121 HYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIMAMAAKVTIAQVTEVVELGQLD 180
           HYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIMAMAAK TIAQV+EVVELGQLD
Sbjct: 143 HYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIMAMAAKCTIAQVSEVVELGQLD 202

Query: 181 PENIITPGIFVQRIVQTKEAQQ 202
           PENI+TPGIFVQRIVQTKEAQQ
Sbjct: 203 PENIVTPGIFVQRIVQTKEAQQ 224


>ref|YP_001074097.1| 3-oxoadipate CoA-transferase subunit A [Burkholderia pseudomallei
           1106a]
 ref|ZP_04811164.1| 3-oxoadipate CoA-transferase, A subunit [Burkholderia pseudomallei
           1106b]
 gb|ABN94974.1| 3-oxoadipate CoA-transferase, A subunit [Burkholderia pseudomallei
           1106a]
 gb|EES21789.1| 3-oxoadipate CoA-transferase, A subunit [Burkholderia pseudomallei
           1106b]
          Length = 282

 Score =  345 bits (884), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 167/199 (83%), Positives = 184/199 (92%)

Query: 1   MIGGFGNAGMPSALIDALIAEGARDLTIVNNNAGNGDTGLAALLKTKRVKKIICSFPRQT 60
           MIGGFG AGMP+ LIDALIA+GARDLTIVNNNAGNG+TGLAALLK +RV+KIICSFPRQ 
Sbjct: 68  MIGGFGTAGMPAELIDALIAQGARDLTIVNNNAGNGETGLAALLKARRVRKIICSFPRQA 127

Query: 61  DSHVFDALYRAGEIELELTPQGNLAERIRAAGAGIGGFFSPTGYGTMLAEGKETRLIDGK 120
           DS VFDALYRAGEIELEL PQGNLAERIRAAGAGIGGFFSPTGYGT LAEGKETR+IDGK
Sbjct: 128 DSQVFDALYRAGEIELELVPQGNLAERIRAAGAGIGGFFSPTGYGTKLAEGKETRVIDGK 187

Query: 121 HYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIMAMAAKVTIAQVTEVVELGQLD 180
           HYV E+PIHADFAL+KA RGDRWGNLVYRKTARNFGP+MAMAAK +I QV++VV LG L+
Sbjct: 188 HYVFETPIHADFALVKAYRGDRWGNLVYRKTARNFGPVMAMAAKTSIVQVSQVVPLGALN 247

Query: 181 PENIITPGIFVQRIVQTKE 199
           PE+I+TPGIFVQRIV+  +
Sbjct: 248 PEHIVTPGIFVQRIVEVPQ 266


>ref|ZP_04969376.1| 3-oxoadipate CoA-transferase, A subunit [Burkholderia pseudomallei
           406e]
 gb|EDO88996.1| 3-oxoadipate CoA-transferase, A subunit [Burkholderia pseudomallei
           406e]
          Length = 282

 Score =  344 bits (882), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 167/199 (83%), Positives = 184/199 (92%)

Query: 1   MIGGFGNAGMPSALIDALIAEGARDLTIVNNNAGNGDTGLAALLKTKRVKKIICSFPRQT 60
           MIGGFG AGMP+ LIDALIA+GARDLTIVNNNAGNG+TGLAALLK +RV+KIICSFPRQ 
Sbjct: 68  MIGGFGTAGMPAELIDALIAQGARDLTIVNNNAGNGETGLAALLKARRVRKIICSFPRQA 127

Query: 61  DSHVFDALYRAGEIELELTPQGNLAERIRAAGAGIGGFFSPTGYGTMLAEGKETRLIDGK 120
           DS VFDALYRAGEIELEL PQGNLAERIRAAGAGIGGFFSPTGYGT LAEGKETR+IDGK
Sbjct: 128 DSQVFDALYRAGEIELELVPQGNLAERIRAAGAGIGGFFSPTGYGTKLAEGKETRVIDGK 187

Query: 121 HYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIMAMAAKVTIAQVTEVVELGQLD 180
           HYV E+PIHADFAL+KA RGDRWGNLVYRKTARNFGP+MAMAAK +I QV++VV LG L+
Sbjct: 188 HYVFETPIHADFALVKAYRGDRWGNLVYRKTARNFGPVMAMAAKTSIVQVSQVVPLGALN 247

Query: 181 PENIITPGIFVQRIVQTKE 199
           PE+I+TPGIFVQRIV+  +
Sbjct: 248 PEHIVTPGIFVQRIVEVPQ 266


>ref|ZP_02884232.1| 3-oxoacid CoA-transferase, A subunit [Burkholderia graminis C4D1M]
 gb|EDT10236.1| 3-oxoacid CoA-transferase, A subunit [Burkholderia graminis C4D1M]
          Length = 235

 Score =  343 bits (881), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 170/200 (85%), Positives = 184/200 (92%)

Query: 1   MIGGFGNAGMPSALIDALIAEGARDLTIVNNNAGNGDTGLAALLKTKRVKKIICSFPRQT 60
           MIGGFG AGMPS LIDALI +GAR+LTIVNNNAGNGD GLAALLK KRV+KIICSFPRQT
Sbjct: 23  MIGGFGTAGMPSELIDALIEQGARELTIVNNNAGNGDIGLAALLKAKRVRKIICSFPRQT 82

Query: 61  DSHVFDALYRAGEIELELTPQGNLAERIRAAGAGIGGFFSPTGYGTMLAEGKETRLIDGK 120
           DS+VFDALYRAGEIELEL PQGNLAERIRAAGAGIGGFF+PTGYGT LAEGKETRLIDG+
Sbjct: 83  DSYVFDALYRAGEIELELVPQGNLAERIRAAGAGIGGFFTPTGYGTKLAEGKETRLIDGR 142

Query: 121 HYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIMAMAAKVTIAQVTEVVELGQLD 180
           HYVLESP+HADFALIKA +GDRWGNLVYRKTARNFGPIMA AAK  I QV+EVV LG LD
Sbjct: 143 HYVLESPLHADFALIKAYKGDRWGNLVYRKTARNFGPIMASAAKTAIVQVSEVVPLGALD 202

Query: 181 PENIITPGIFVQRIVQTKEA 200
           PENI+TPGIFVQR+++  +A
Sbjct: 203 PENIVTPGIFVQRVIEVPQA 222


>ref|ZP_03454788.1| 3-oxoadipate CoA-transferase, A subunit [Burkholderia pseudomallei
           576]
 gb|EEC34214.1| 3-oxoadipate CoA-transferase, A subunit [Burkholderia pseudomallei
           576]
          Length = 282

 Score =  343 bits (880), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 167/199 (83%), Positives = 184/199 (92%)

Query: 1   MIGGFGNAGMPSALIDALIAEGARDLTIVNNNAGNGDTGLAALLKTKRVKKIICSFPRQT 60
           MIGGFG AGMP+ LIDALIA+GARDLTIVNNNAGNG+TGLAALLK +RV+KIICSFPRQ 
Sbjct: 68  MIGGFGTAGMPAELIDALIAQGARDLTIVNNNAGNGETGLAALLKARRVRKIICSFPRQA 127

Query: 61  DSHVFDALYRAGEIELELTPQGNLAERIRAAGAGIGGFFSPTGYGTMLAEGKETRLIDGK 120
           DS VFDALYRAGEIELEL PQGNLAERIRAAGAGIGGFFSPTGYGT LAEGKETR+IDGK
Sbjct: 128 DSQVFDALYRAGEIELELVPQGNLAERIRAAGAGIGGFFSPTGYGTKLAEGKETRVIDGK 187

Query: 121 HYVLESPIHADFALIKALRGDRWGNLVYRKTARNFGPIMAMAAKVTIAQVTEVVELGQLD 180
           HYV E+PIHADFAL+KA RGDRWGNLVYRKTARNFGP+MAMAAK +I QV++VV LG L+
Sbjct: 188 HYVFETPIHADFALVKAYRGDRWGNLVYRKTARNFGPVMAMAAKTSIVQVSQVVPLGALN 247

Query: 181 PENIITPGIFVQRIVQTKE 199
           PE+I+TPGIFVQRIV+  +
Sbjct: 248 PEHIVTPGIFVQRIVEVPQ 266