BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5165.p (400 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777379.1| beta-ketoadipyl-CoA thiolase [Herbaspirillum... 708 0.0 emb|CAQ35882.1| beta-ketoadipyl coa thiolase protein [Ralstonia ... 619 e-175 ref|YP_001900023.1| beta-ketoadipyl CoA thiolase [Ralstonia pick... 619 e-175 ref|YP_003745069.1| beta-ketoadipyl-CoA thiolase [Ralstonia sola... 616 e-174 gb|AEG68478.1| beta-ketoadipyl coa thiolase protein [Ralstonia s... 615 e-174 >ref|YP_003777379.1| beta-ketoadipyl-CoA thiolase [Herbaspirillum seropedicae SmR1] gb|ADJ65471.1| beta-ketoadipyl-CoA thiolase protein [Herbaspirillum seropedicae SmR1] Length = 400 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 394/400 (98%), Positives = 398/400 (99%) Query: 1 MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIFGCANQA 60 MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVI+GCANQA Sbjct: 1 MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIYGCANQA 60 Query: 61 GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM 120 GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM Sbjct: 61 GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM 120 Query: 121 TRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRED 180 TRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSR D Sbjct: 121 TRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRAD 180 Query: 181 QDQFAVRSQAKAAAAQANGNLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGV 240 QDQFAVRSQAKAAAAQANG LAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGV Sbjct: 181 QDQFAVRSQAKAAAAQANGTLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGV 240 Query: 241 VRPDGTVTAGNASGVNDGACALLLASADAVEKYQLKPRARILGMATAGVAPRIMGMGPAP 300 V+PDG+VTAGNASGVNDGACALLLASA+AVEKYQLKPRARILGMATAGVAPRIMGMGPAP Sbjct: 241 VKPDGSVTAGNASGVNDGACALLLASAEAVEKYQLKPRARILGMATAGVAPRIMGMGPAP 300 Query: 301 ASKKVLAQLGMTIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGHPLGM 360 ASKKVLAQLGMTIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGHPLGM Sbjct: 301 ASKKVLAQLGMTIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGHPLGM 360 Query: 361 SGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV 400 SGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV Sbjct: 361 SGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV 400 >emb|CAQ35882.1| beta-ketoadipyl coa thiolase protein [Ralstonia solanacearum MolK2] Length = 400 Score = 619 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 329/400 (82%), Positives = 366/400 (91%) Query: 1 MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIFGCANQA 60 M FICDAIRTPIGRYGG+L VRADDLGAVPL+ALM RNP+VDW A+DDVIFGCANQA Sbjct: 1 MTQAFICDAIRTPIGRYGGSLSAVRADDLGAVPLKALMARNPRVDWSAIDDVIFGCANQA 60 Query: 61 GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM 120 GEDNRNVARMS LLAGLPQ VPGSTINRLCGSGMDA GTAARAI++GET LMIAGGVESM Sbjct: 61 GEDNRNVARMSSLLAGLPQSVPGSTINRLCGSGMDATGTAARAIRAGETALMIAGGVESM 120 Query: 121 TRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRED 180 +RAPFVMGKA SAFSR A + DTTIGWRFVN LM+ +YGVD+MPETAENVA D++V+RED Sbjct: 121 SRAPFVMGKAASAFSRDANLYDTTIGWRFVNPLMQAQYGVDSMPETAENVATDYRVNRED 180 Query: 181 QDQFAVRSQAKAAAAQANGNLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGV 240 QD+FA+RSQA AA AQA+G LAQEI PV I QKKGDPI V +DEHPRAT++E+LA+LKGV Sbjct: 181 QDRFALRSQANAARAQADGTLAQEITPVTIAQKKGDPIVVDRDEHPRATTLESLAKLKGV 240 Query: 241 VRPDGTVTAGNASGVNDGACALLLASADAVEKYQLKPRARILGMATAGVAPRIMGMGPAP 300 VRPDGTVTAGNASGVNDGACALLLA+ DA +++ L PRARI+GMATAGV PR+MG+GPAP Sbjct: 241 VRPDGTVTAGNASGVNDGACALLLANEDAAKRFGLTPRARIVGMATAGVLPRVMGIGPAP 300 Query: 301 ASKKVLAQLGMTIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGHPLGM 360 AS+KVL QLG+T+DQMDVIELNEAFA+QGLAV R+LG+ADDDARVNPNGGAIALGHPLGM Sbjct: 301 ASQKVLGQLGLTLDQMDVIELNEAFAAQGLAVTRQLGLADDDARVNPNGGAIALGHPLGM 360 Query: 361 SGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV 400 SGARLVTTA YQL+RTGGRYALCTMCIGVGQGIA+VIERV Sbjct: 361 SGARLVTTAMYQLQRTGGRYALCTMCIGVGQGIALVIERV 400 >ref|YP_001900023.1| beta-ketoadipyl CoA thiolase [Ralstonia pickettii 12J] ref|ZP_07676421.1| beta-ketoadipyl CoA thiolase [Ralstonia sp. 5_7_47FAA] gb|ACD27591.1| beta-ketoadipyl CoA thiolase [Ralstonia pickettii 12J] gb|EFP64993.1| beta-ketoadipyl CoA thiolase [Ralstonia sp. 5_7_47FAA] Length = 400 Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 329/400 (82%), Positives = 363/400 (90%) Query: 1 MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIFGCANQA 60 M + FICDAIRTPIGRYGG+L VRADDLGAVPL+ALM RNPQVDW A+DDVIFGCANQA Sbjct: 1 MTEAFICDAIRTPIGRYGGSLSAVRADDLGAVPLKALMARNPQVDWSAIDDVIFGCANQA 60 Query: 61 GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM 120 GEDNRNVARMS LLAGLP VPGSTINRLCGSGMDA GTAARAI+SGET LMIAGGVESM Sbjct: 61 GEDNRNVARMSSLLAGLPDSVPGSTINRLCGSGMDATGTAARAIRSGETALMIAGGVESM 120 Query: 121 TRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRED 180 +RAPFVMGKA SAFSR AAI DTTIGWRF+N LMK +YGVD+MPETAENVA D+KV+RED Sbjct: 121 SRAPFVMGKAASAFSRDAAIYDTTIGWRFINPLMKAQYGVDSMPETAENVATDYKVNRED 180 Query: 181 QDQFAVRSQAKAAAAQANGNLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGV 240 QD+FA+RSQA AA AQ +G LAQEI PV IPQ+KGD I V +DEHPRATSMEALA+LKGV Sbjct: 181 QDRFALRSQASAARAQEDGTLAQEITPVTIPQRKGDAIVVDRDEHPRATSMEALAKLKGV 240 Query: 241 VRPDGTVTAGNASGVNDGACALLLASADAVEKYQLKPRARILGMATAGVAPRIMGMGPAP 300 VRPDGTVTAGNASGVNDGACALLLA+ + +++ L PRARI+GMATAGV PR+MG+GPAP Sbjct: 241 VRPDGTVTAGNASGVNDGACALLLANEASAKRFGLTPRARIVGMATAGVPPRVMGIGPAP 300 Query: 301 ASKKVLAQLGMTIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGHPLGM 360 AS+K+L QLG++IDQMDVIELNEAFA+QGLAV R+LG+ DDD RVNPNGGAIALGHPLGM Sbjct: 301 ASQKLLKQLGLSIDQMDVIELNEAFAAQGLAVTRQLGLRDDDPRVNPNGGAIALGHPLGM 360 Query: 361 SGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV 400 SGARLVTTA YQL+RTGGRYALCTMCIGVGQGIA+VIERV Sbjct: 361 SGARLVTTAMYQLQRTGGRYALCTMCIGVGQGIALVIERV 400 >ref|YP_003745069.1| beta-ketoadipyl-CoA thiolase [Ralstonia solanacearum CFBP2957] emb|CBJ42442.1| Beta-ketoadipyl-CoA thiolase [Ralstonia solanacearum CFBP2957] Length = 400 Score = 616 bits (1588), Expect = e-174, Method: Composition-based stats. Identities = 328/400 (82%), Positives = 364/400 (91%) Query: 1 MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIFGCANQA 60 M FICDAIRTPIGRYGG+L VRADDLGAVPL+ALM RNPQVDW A+DDVIFGCANQA Sbjct: 1 MTQAFICDAIRTPIGRYGGSLSAVRADDLGAVPLKALMARNPQVDWSAIDDVIFGCANQA 60 Query: 61 GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM 120 GEDNRNVARMS LLAGLPQ VPGST+NRLCGSGMDA GTAARAI++GET LMIAGGVESM Sbjct: 61 GEDNRNVARMSSLLAGLPQSVPGSTVNRLCGSGMDATGTAARAIRAGETALMIAGGVESM 120 Query: 121 TRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRED 180 +RAPFVMGKA SAFSR A + DTTIGWRFVN LM+ +YGVD+MPETAENVA D++V+RED Sbjct: 121 SRAPFVMGKAASAFSRDANLYDTTIGWRFVNPLMQAQYGVDSMPETAENVATDYRVNRED 180 Query: 181 QDQFAVRSQAKAAAAQANGNLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGV 240 QD+FA+RSQA AA AQA+G LAQEI PV I QKKGDPI V +DEHPRAT++E+LA+LKGV Sbjct: 181 QDRFALRSQANAARAQADGTLAQEITPVTIAQKKGDPIVVERDEHPRATTLESLAKLKGV 240 Query: 241 VRPDGTVTAGNASGVNDGACALLLASADAVEKYQLKPRARILGMATAGVAPRIMGMGPAP 300 VRPDGTVTAGNASGVNDGACALLLA A +++ L PRARI+GMATAGV PR+MG+GPAP Sbjct: 241 VRPDGTVTAGNASGVNDGACALLLADESAAKRFGLTPRARIVGMATAGVPPRVMGIGPAP 300 Query: 301 ASKKVLAQLGMTIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGHPLGM 360 AS+KVL QLG+T+DQMDVIELNEAFA+QGLAV R+LG+ADDDARVNPNGGAIALGHPLGM Sbjct: 301 ASQKVLGQLGLTLDQMDVIELNEAFAAQGLAVARQLGLADDDARVNPNGGAIALGHPLGM 360 Query: 361 SGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV 400 SGARLVTTA YQL+RTGGRYALCTMCIGVGQGIA+VIERV Sbjct: 361 SGARLVTTAMYQLQRTGGRYALCTMCIGVGQGIALVIERV 400 >gb|AEG68478.1| beta-ketoadipyl coa thiolase protein [Ralstonia solanacearum Po82] Length = 400 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 328/400 (82%), Positives = 364/400 (91%) Query: 1 MKDVFICDAIRTPIGRYGGALKDVRADDLGAVPLRALMERNPQVDWKAVDDVIFGCANQA 60 M FICDAIRTPIGRYGG+L VRADDLGAVPL+ALM RNP+VDW A+DDVIFGCANQA Sbjct: 1 MTQAFICDAIRTPIGRYGGSLSAVRADDLGAVPLKALMARNPRVDWSAIDDVIFGCANQA 60 Query: 61 GEDNRNVARMSLLLAGLPQEVPGSTINRLCGSGMDALGTAARAIKSGETQLMIAGGVESM 120 GEDNRNVARMS LLAGLPQ VPGSTINRLCGSGMDA GTAARAI++GET LMIAGGVESM Sbjct: 61 GEDNRNVARMSSLLAGLPQSVPGSTINRLCGSGMDATGTAARAIRAGETALMIAGGVESM 120 Query: 121 TRAPFVMGKADSAFSRQAAIQDTTIGWRFVNALMKQKYGVDAMPETAENVAVDFKVSRED 180 +RAPFVMGKA SAFSR A + DTTIGWRFVN LM+ +YGVD+MPETAENVA D++V+RED Sbjct: 121 SRAPFVMGKAASAFSRDADLYDTTIGWRFVNPLMQAQYGVDSMPETAENVATDYRVNRED 180 Query: 181 QDQFAVRSQAKAAAAQANGNLAQEIVPVVIPQKKGDPITVTQDEHPRATSMEALARLKGV 240 QD+FA+RSQA AA AQA+G LAQEI PV I QKKG PI V +DEHPRAT++E LA+LKGV Sbjct: 181 QDRFALRSQANAARAQADGTLAQEITPVTIAQKKGAPIVVDRDEHPRATTLELLAKLKGV 240 Query: 241 VRPDGTVTAGNASGVNDGACALLLASADAVEKYQLKPRARILGMATAGVAPRIMGMGPAP 300 VRPDGTVTAGNASGVNDGACALLLA+ DA +++ L PRARI+GMATAGV PR+MG+GPAP Sbjct: 241 VRPDGTVTAGNASGVNDGACALLLANEDAAKRFGLTPRARIVGMATAGVPPRVMGIGPAP 300 Query: 301 ASKKVLAQLGMTIDQMDVIELNEAFASQGLAVLRELGVADDDARVNPNGGAIALGHPLGM 360 AS+KVL QLG+T+DQMDVIELNEAFA+QGLAV R+LG+ADDDARVNPNGGAIALGHPLGM Sbjct: 301 ASQKVLKQLGLTLDQMDVIELNEAFAAQGLAVTRQLGLADDDARVNPNGGAIALGHPLGM 360 Query: 361 SGARLVTTATYQLERTGGRYALCTMCIGVGQGIAMVIERV 400 SGARLVTTA YQL+RTGGRYALCTMCIGVGQGIA+VIERV Sbjct: 361 SGARLVTTAMYQLQRTGGRYALCTMCIGVGQGIALVIERV 400