BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5162.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777376.1| branched-chain amino acid ABC transporter AT... 452 e-125 ref|YP_298209.1| ABC transporter-like protein [Ralstonia eutroph... 352 2e-95 emb|CBJ37334.1| leucine/isoleucine/valine transporter subunit ; ... 351 5e-95 ref|YP_002982009.1| ABC transporter-like protein [Ralstonia pick... 350 9e-95 ref|YP_001900017.1| ABC transporter-like protein [Ralstonia pick... 348 4e-94 >ref|YP_003777376.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65468.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 257 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 238/252 (94%), Positives = 244/252 (96%) Query: 4 HPADTTLRTEGLSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFAPSG 63 H ADTTLRTEGLSKRWGSFVANSDISLTF PGARHALIGPNGAGKTTFINLLTGGFAPS Sbjct: 6 HQADTTLRTEGLSKRWGSFVANSDISLTFAPGARHALIGPNGAGKTTFINLLTGGFAPSS 65 Query: 64 GKVWFGGEDITALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWYQTV 123 G+VWFGGEDITAL QH RVKRGMTRTFQINTLFAGLTVLESV+LAIQERRGLQYKWYQTV Sbjct: 66 GRVWFGGEDITALPQHARVKRGMTRTFQINTLFAGLTVLESVVLAIQERRGLQYKWYQTV 125 Query: 124 ASQTDVVNEAMALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPAAGI 183 ASQT+VV+EAMALL SLKL QEANS+TR+LAYGKQRLVEIALALATQPKVLLLDEPAAGI Sbjct: 126 ASQTEVVDEAMALLASLKLAQEANSLTRNLAYGKQRLVEIALALATQPKVLLLDEPAAGI 185 Query: 184 PSAESRELFEVIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADQR 243 PSAESRELFEVIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAAD R Sbjct: 186 PSAESRELFEVIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADPR 245 Query: 244 VKEVYLGEAEHA 255 VKEVYLGEAEHA Sbjct: 246 VKEVYLGEAEHA 257 >ref|YP_298209.1| ABC transporter-like protein [Ralstonia eutropha JMP134] gb|AAZ63365.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Ralstonia eutropha JMP134] Length = 250 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 185/246 (75%), Positives = 208/246 (84%) Query: 10 LRTEGLSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFAPSGGKVWFG 69 LRTEGLS++WG+FVANSDISL F PG RHALIGPNGAGKTTFINLLTG AP+ G++W G Sbjct: 5 LRTEGLSRQWGAFVANSDISLNFAPGTRHALIGPNGAGKTTFINLLTGALAPTSGRIWLG 64 Query: 70 GEDITALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWYQTVASQTDV 129 ++IT L QH RV+ GMTRTFQINTLF GLTVLESV+LA+ ER G W +TVASQ + Sbjct: 65 TQEITKLPQHARVRLGMTRTFQINTLFPGLTVLESVVLAVAERTGAARIWSRTVASQRAL 124 Query: 130 VNEAMALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPAAGIPSAESR 189 V+EAMA+L SL++ EA+ TR L YGKQRL+EIALALAT+P +LLLDEPAAGIPSAES Sbjct: 125 VDEAMAVLASLRIDGEADVETRCLPYGKQRLLEIALALATRPSILLLDEPAAGIPSAESA 184 Query: 190 ELFEVIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADQRVKEVYL 249 ELF+VIA LPRE+TIVFIEHDM LVFRFAERITVLVGGKVL EG PAEIAAD RVKEVYL Sbjct: 185 ELFDVIAALPREITIVFIEHDMDLVFRFAERITVLVGGKVLTEGAPAEIAADLRVKEVYL 244 Query: 250 GEAEHA 255 GEA H Sbjct: 245 GEAVHG 250 >emb|CBJ37334.1| leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily [Ralstonia solanacearum CMR15] Length = 252 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 185/255 (72%), Positives = 211/255 (82%), Gaps = 3/255 (1%) Query: 1 MSPHPADTTLRTEGLSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFA 60 M P P TL T GLSKRWG F AN+DISLTF PGARHALIGPNGAGKTTFINLLTG FA Sbjct: 1 MPPAP---TLSTRGLSKRWGGFHANADISLTFAPGARHALIGPNGAGKTTFINLLTGAFA 57 Query: 61 PSGGKVWFGGEDITALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWY 120 P+ G+V G+DIT L H+RVKRG+TRTFQINTLF GLTVLESV+LAI ER G + W+ Sbjct: 58 PTAGQVLLDGDDITRLPTHQRVKRGITRTFQINTLFPGLTVLESVMLAIFERTGASWYWH 117 Query: 121 QTVASQTDVVNEAMALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPA 180 +TVAS T +EAMALL L+LG +A+S T +L YGKQRL+EIALALAT+P++LLLDEPA Sbjct: 118 RTVASHTAARDEAMALLGRLQLGADASSPTHALPYGKQRLLEIALALATRPRILLLDEPA 177 Query: 181 AGIPSAESRELFEVIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAA 240 AGIP+ ES ELFEVIA LPR++TI+FIEHDM LVFRFAERI+VLV G+VL EGTP EIAA Sbjct: 178 AGIPAGESAELFEVIAGLPRDITILFIEHDMNLVFRFAERISVLVAGRVLTEGTPQEIAA 237 Query: 241 DQRVKEVYLGEAEHA 255 D RV+EVYLGEA H Sbjct: 238 DPRVREVYLGEAAHG 252 >ref|YP_002982009.1| ABC transporter-like protein [Ralstonia pickettii 12D] gb|ACS63337.1| ABC transporter related [Ralstonia pickettii 12D] Length = 257 Score = 350 bits (899), Expect = 9e-95, Method: Composition-based stats. Identities = 183/252 (72%), Positives = 207/252 (82%), Gaps = 1/252 (0%) Query: 4 HPADTTLRTEGLSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFAPSG 63 HP TL T GLS+RWG F ANSDISL+F PGARHALIGPNGAGKTTFINLLTG AP+ Sbjct: 7 HPP-PTLSTRGLSRRWGGFHANSDISLSFAPGARHALIGPNGAGKTTFINLLTGTLAPTA 65 Query: 64 GKVWFGGEDITALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWYQTV 123 G+V EDIT L H+RVKRG+TRTFQINTLF GLTVLESV+LAI ER G + W++TV Sbjct: 66 GQVLLDDEDITRLPAHQRVKRGITRTFQINTLFPGLTVLESVMLAIFERTGASWHWHRTV 125 Query: 124 ASQTDVVNEAMALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPAAGI 183 AS D +EAMALL L+LG +A + T +L YGKQRLVEIALALAT P++LLLDEPAAGI Sbjct: 126 ASHKDARDEAMALLCRLQLGADALAPTHALPYGKQRLVEIALALATHPRILLLDEPAAGI 185 Query: 184 PSAESRELFEVIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADQR 243 PS +S ELFEVIA LPR++TI+FIEHDM LVFRFAERITVL+ G+VL EGTP EIAAD R Sbjct: 186 PSGQSTELFEVIASLPRDITILFIEHDMNLVFRFAERITVLLAGRVLTEGTPQEIAADPR 245 Query: 244 VKEVYLGEAEHA 255 V+EVYLGE EHA Sbjct: 246 VREVYLGEVEHA 257 >ref|YP_001900017.1| ABC transporter-like protein [Ralstonia pickettii 12J] ref|ZP_07676427.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ralstonia sp. 5_7_47FAA] gb|ACD27585.1| ABC transporter related [Ralstonia pickettii 12J] gb|EFP64999.1| branched-chain amino acid ABC transporter, ATP-binding protein [Ralstonia sp. 5_7_47FAA] Length = 257 Score = 348 bits (893), Expect = 4e-94, Method: Composition-based stats. Identities = 183/252 (72%), Positives = 206/252 (81%), Gaps = 1/252 (0%) Query: 4 HPADTTLRTEGLSKRWGSFVANSDISLTFTPGARHALIGPNGAGKTTFINLLTGGFAPSG 63 HP TL T GLS+RWG F ANSDISL+F PGARHALIGPNGAGKTTFINLLTG AP+ Sbjct: 7 HPP-PTLSTRGLSRRWGGFHANSDISLSFAPGARHALIGPNGAGKTTFINLLTGTLAPTA 65 Query: 64 GKVWFGGEDITALAQHERVKRGMTRTFQINTLFAGLTVLESVILAIQERRGLQYKWYQTV 123 G+V EDIT L H+RVKRG+TRTFQINTLF LTVLESV+LAI ER G + W++TV Sbjct: 66 GQVLLDDEDITRLPAHQRVKRGITRTFQINTLFPVLTVLESVMLAIFERTGASWHWHRTV 125 Query: 124 ASQTDVVNEAMALLESLKLGQEANSITRSLAYGKQRLVEIALALATQPKVLLLDEPAAGI 183 AS D +EAMALL L+LG +A + T +L YGKQRLVEIALALAT P++LLLDEPAAGI Sbjct: 126 ASHKDARDEAMALLCRLQLGADALAPTHALPYGKQRLVEIALALATHPRILLLDEPAAGI 185 Query: 184 PSAESRELFEVIAQLPREVTIVFIEHDMGLVFRFAERITVLVGGKVLVEGTPAEIAADQR 243 PS ES ELFEVIA LPR++TI+FIEHDM LVFRFAERITVL+ G+VL EGTP EIAAD R Sbjct: 186 PSRESTELFEVIASLPRDITILFIEHDMNLVFRFAERITVLLAGRVLTEGTPQEIAADPR 245 Query: 244 VKEVYLGEAEHA 255 V+EVYLGE EHA Sbjct: 246 VREVYLGEVEHA 257