BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5157.p (318 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777370.1| vanillate O-demethylase (vanillate degradati... 566 e-159 ref|YP_003899010.1| ferredoxin [Halomonas elongata DSM 2581] >gi... 406 e-111 ref|YP_982947.1| ferredoxin [Polaromonas naphthalenivorans CJ2] ... 405 e-111 ref|YP_001778648.1| phthalate 4,5-dioxygenase [Burkholderia ceno... 400 e-109 ref|YP_622992.1| ferredoxin [Burkholderia cenocepacia AU 1054] >... 397 e-108 >ref|YP_003777370.1| vanillate O-demethylase (vanillate degradation ferredoxin-like) oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ65462.1| vanillate O-demethylase (vanillate degradation ferredoxin-like) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 318 Score = 567 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 292/318 (91%), Positives = 305/318 (95%) Query: 1 MTTLQVKVAARREEAQDIVALELVAADGQPLPGFTAGAHIDVHLPGGLLRQYSLCNAPHE 60 MTTLQVKVAARREEA DI+ALELVA DG LP FTAGAHIDVHLPGGL+RQYSLCNAPHE Sbjct: 1 MTTLQVKVAARREEAHDIIALELVAVDGAALPAFTAGAHIDVHLPGGLVRQYSLCNAPHE 60 Query: 61 QHRYQIGVLRDANSRGGSVAVHEALKVGDLLTIGVPRNQFALVPAQHSLLLAGGIGVTPI 120 QHRYQIGVLRD NSRGGSVAVHEALK+GD+LTI PRNQFALVPAQHSLLLAGGIGVTPI Sbjct: 61 QHRYQIGVLRDVNSRGGSVAVHEALKLGDILTISAPRNQFALVPAQHSLLLAGGIGVTPI 120 Query: 121 LCMAEALAASGASFEMHYCARSPARQAFRERIAGSGFADRVVHHYDDGDAAQKLDLEALL 180 LCMAEALAA+GASFEMHYCARSPARQAFRERIA SGFA RVVHHYDDG+AAQKLDL+ALL Sbjct: 121 LCMAEALAAAGASFEMHYCARSPARQAFRERIAASGFAARVVHHYDDGEAAQKLDLDALL 180 Query: 181 SQADPATHLYVCGPAGFIAHVVETARAHGWPESQVHFEYFGAAPVTADGNGAFDVKLASS 240 +QADPATHLYVCGPAGFIAHVV+TARA GWPE+QVHFEYFGAAPV ADGNGAF+VKLASS Sbjct: 181 AQADPATHLYVCGPAGFIAHVVDTARARGWPEAQVHFEYFGAAPVKADGNGAFEVKLASS 240 Query: 241 GQVYTIPADRTVIQVLCEHGVDVPVSCEQGICGTCLTRVLEGEPDHRDQYLTDEERAAND 300 GQVYTIP +RTVIQVLCEHGVDVPVSCEQGICGTCLTRVLEGEPDHRDQYLTDEERAAND Sbjct: 241 GQVYTIPPERTVIQVLCEHGVDVPVSCEQGICGTCLTRVLEGEPDHRDQYLTDEERAAND 300 Query: 301 QFTPCCSRARSSLLVLDL 318 QFTPCCSRARS+LLVLDL Sbjct: 301 QFTPCCSRARSALLVLDL 318 >ref|YP_003899010.1| ferredoxin [Halomonas elongata DSM 2581] emb|CBV43825.1| ferredoxin [Halomonas elongata DSM 2581] Length = 326 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 198/320 (61%), Positives = 243/320 (75%), Gaps = 4/320 (1%) Query: 3 TLQVKVAARREEAQDIVALELVAADGQPLPGFTAGAHIDVHLPGG----LLRQYSLCNAP 58 +L V+V AR EEAQDIV EL G+PLP F+AGAHIDV + ++RQYSLCN P Sbjct: 7 SLIVEVKARHEEAQDIVTFELADPHGRPLPAFSAGAHIDVQVSSKGQNTIIRQYSLCNHP 66 Query: 59 HEQHRYQIGVLRDANSRGGSVAVHEALKVGDLLTIGVPRNQFALVPAQHSLLLAGGIGVT 118 E+ RY IGVLRD SRGGSVA+H+ ++VGDL+ I P+N F L PA+ +LLLAGGIG+T Sbjct: 67 EERDRYLIGVLRDPASRGGSVAMHDEIRVGDLIQISAPKNHFPLEPAERTLLLAGGIGIT 126 Query: 119 PILCMAEALAASGASFEMHYCARSPARQAFRERIAGSGFADRVVHHYDDGDAAQKLDLEA 178 P+LCMAE LA + +FE+HYC RSP R AFR+RIA SGFA++V H+DDG A QKLDLE+ Sbjct: 127 PLLCMAERLAHTDTTFELHYCTRSPERTAFRDRIAASGFAEKVHFHFDDGPAEQKLDLES 186 Query: 179 LLSQADPATHLYVCGPAGFIAHVVETARAHGWPESQVHFEYFGAAPVTADGNGAFDVKLA 238 LL+ P T +YVCGP GFI V+ T ++ GWP Q+H EYF A + + +F+VK+A Sbjct: 187 LLATPAPDTRVYVCGPTGFIDAVMSTCQSAGWPSDQLHTEYFAGAVANTEDDDSFEVKIA 246 Query: 239 SSGQVYTIPADRTVIQVLCEHGVDVPVSCEQGICGTCLTRVLEGEPDHRDQYLTDEERAA 298 SSG T+PAD+TV QVL E+G+DV VSCEQG+CGTCLTRVLEGEPDHRD +L D E AA Sbjct: 247 SSGATLTVPADKTVHQVLTENGIDVMVSCEQGVCGTCLTRVLEGEPDHRDFFLEDHEHAA 306 Query: 299 NDQFTPCCSRARSSLLVLDL 318 NDQFTPCCSRA+S +LVLDL Sbjct: 307 NDQFTPCCSRAKSKVLVLDL 326 >ref|YP_982947.1| ferredoxin [Polaromonas naphthalenivorans CJ2] gb|ABM38026.1| ferredoxin [Polaromonas naphthalenivorans CJ2] Length = 322 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 199/318 (62%), Positives = 242/318 (76%), Gaps = 1/318 (0%) Query: 2 TTLQVKVAARREEAQDIVALELVAADGQPLPGFTAGAHIDVHLPGGLLRQYSLCNAPHEQ 61 +T+ V+VA ++ EA DI ELVA +G PLP F+AG+H+DVHLPGGL RQYSLCN P E Sbjct: 5 STISVRVARKQREAVDICTFELVAEEGGPLPAFSAGSHVDVHLPGGLTRQYSLCNDPTES 64 Query: 62 HRYQIGVLRDANSRGGSVAVHEALKVGDLLTIGVPRNQFALV-PAQHSLLLAGGIGVTPI 120 HRY IGVLRD SRGGS A+H+ + G +L I P N F L AQ LLLAGGIGVTPI Sbjct: 65 HRYLIGVLRDPASRGGSRAMHDQVAEGQVLQISAPNNHFPLAHDAQRHLLLAGGIGVTPI 124 Query: 121 LCMAEALAASGASFEMHYCARSPARQAFRERIAGSGFADRVVHHYDDGDAAQKLDLEALL 180 LCMAE LA +GA FEMHYC RSP R AF +RIAGSGFA +V H+DDG A QKLD+ ALL Sbjct: 125 LCMAERLANTGADFEMHYCTRSPERTAFHQRIAGSGFAPKVHFHFDDGAAGQKLDIPALL 184 Query: 181 SQADPATHLYVCGPAGFIAHVVETARAHGWPESQVHFEYFGAAPVTADGNGAFDVKLASS 240 S HLYVCGP GF+ V+ TA+A GWPE+Q+H+E+F +D + +F+V+LASS Sbjct: 185 STPASGVHLYVCGPKGFMDAVLNTAQAQGWPEAQLHYEFFAGTVEKSDSDASFEVQLASS 244 Query: 241 GQVYTIPADRTVIQVLCEHGVDVPVSCEQGICGTCLTRVLEGEPDHRDQYLTDEERAAND 300 G++ +P+D+TV+Q L + GVDV VSCEQG+CGTCLTRV+EG PDH+D YLT EE+AAND Sbjct: 245 GRIVMVPSDKTVVQALADAGVDVQVSCEQGVCGTCLTRVIEGIPDHKDMYLTPEEQAAND 304 Query: 301 QFTPCCSRARSSLLVLDL 318 QFTPCCSRA++ LVLDL Sbjct: 305 QFTPCCSRAKTPRLVLDL 322 >ref|YP_001778648.1| phthalate 4,5-dioxygenase [Burkholderia cenocepacia MC0-3] gb|ACA94158.1| Phthalate 4,5-dioxygenase [Burkholderia cenocepacia MC0-3] Length = 321 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 201/317 (63%), Positives = 242/317 (76%), Gaps = 1/317 (0%) Query: 3 TLQVKVAARREEAQDIVALELVAADGQPLPGFTAGAHIDVHLPGGLLRQYSLCNAPHEQH 62 TL V+VA + EA+DI ELV+ DG PLP F AGAHIDVHLPGGL+RQYSLCN P ++ Sbjct: 5 TLTVRVARKWHEARDICGFELVSDDGSPLPRFDAGAHIDVHLPGGLVRQYSLCNHPEQRD 64 Query: 63 RYQIGVLRDANSRGGSVAVHEALKVGDLLTIGVPRNQFALVP-AQHSLLLAGGIGVTPIL 121 RYQI VLR+A RGGS A+H+ ++ GD + IG+PRNQF L P A H LLLAGGIGVTPIL Sbjct: 65 RYQIAVLREAEGRGGSRAIHDEVRQGDTVRIGLPRNQFPLAPDAPHHLLLAGGIGVTPIL 124 Query: 122 CMAEALAASGASFEMHYCARSPARQAFRERIAGSGFADRVVHHYDDGDAAQKLDLEALLS 181 MAE L++SG SF+MHYCARS R AF ERI +GF DRV H DDGD AQ+ DL A+L+ Sbjct: 125 SMAERLSSSGTSFDMHYCARSTDRMAFVERINTAGFHDRVRFHVDDGDPAQRFDLAAVLA 184 Query: 182 QADPATHLYVCGPAGFIAHVVETARAHGWPESQVHFEYFGAAPVTADGNGAFDVKLASSG 241 A THLYVCGP GF+ V+ AR GW E+++H+E+FG A V + + AF V++ASSG Sbjct: 185 GAPDGTHLYVCGPRGFMDAVLNAARERGWSEARLHYEFFGGAVVPSGADRAFQVQIASSG 244 Query: 242 QVYTIPADRTVIQVLCEHGVDVPVSCEQGICGTCLTRVLEGEPDHRDQYLTDEERAANDQ 301 +V +PA+ TVI L +GVDV SCEQG+CGTCLTRVLEGEPDHRD YLTD+E+AA DQ Sbjct: 245 KVIDVPAECTVIAALAANGVDVLTSCEQGVCGTCLTRVLEGEPDHRDAYLTDDEKAAGDQ 304 Query: 302 FTPCCSRARSSLLVLDL 318 F PCCSR+R+ LLVLDL Sbjct: 305 FMPCCSRSRTDLLVLDL 321 >ref|YP_622992.1| ferredoxin [Burkholderia cenocepacia AU 1054] ref|YP_838870.1| ferredoxin [Burkholderia cenocepacia HI2424] gb|ABF78019.1| ferredoxin [Burkholderia cenocepacia AU 1054] gb|ABK11977.1| ferredoxin [Burkholderia cenocepacia HI2424] Length = 321 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 198/317 (62%), Positives = 242/317 (76%), Gaps = 1/317 (0%) Query: 3 TLQVKVAARREEAQDIVALELVAADGQPLPGFTAGAHIDVHLPGGLLRQYSLCNAPHEQH 62 TL V+VA + +EA+DI ELV+ DG PLP F AGAHIDVHLPGGL+RQYSLCN P ++ Sbjct: 5 TLTVRVARKWQEARDICGFELVSDDGSPLPRFDAGAHIDVHLPGGLVRQYSLCNHPEQRD 64 Query: 63 RYQIGVLRDANSRGGSVAVHEALKVGDLLTIGVPRNQFALVP-AQHSLLLAGGIGVTPIL 121 RYQI VLR+A+ RGGS A+H+ ++ GD + IG+PRNQF L P A H LLLAGGIGVTPIL Sbjct: 65 RYQIAVLREADGRGGSRAIHDEIRQGDTVRIGLPRNQFPLAPDAPHHLLLAGGIGVTPIL 124 Query: 122 CMAEALAASGASFEMHYCARSPARQAFRERIAGSGFADRVVHHYDDGDAAQKLDLEALLS 181 MAE L ++G F+MHYCARS R AF ERI +GF DRV H DDGD AQ+ DL A+L+ Sbjct: 125 AMAERLFSAGMPFDMHYCARSTDRMAFVERINAAGFHDRVRFHVDDGDPAQRFDLAAVLA 184 Query: 182 QADPATHLYVCGPAGFIAHVVETARAHGWPESQVHFEYFGAAPVTADGNGAFDVKLASSG 241 A THLYVCGP GF+ V+ AR W E+++H+E+FG A V++ + AF V++ASSG Sbjct: 185 GAPDGTHLYVCGPRGFMDAVLNAAREREWSEARLHYEFFGGAVVSSGADRAFQVQIASSG 244 Query: 242 QVYTIPADRTVIQVLCEHGVDVPVSCEQGICGTCLTRVLEGEPDHRDQYLTDEERAANDQ 301 +V +PA+ TVI L +GVDV SCEQG+CGTCLTRVLEGEPDHRD YLTD+E+AA DQ Sbjct: 245 KVIDVPAECTVIAALAANGVDVLTSCEQGVCGTCLTRVLEGEPDHRDTYLTDDEKAAGDQ 304 Query: 302 FTPCCSRARSSLLVLDL 318 F PCCSR+R+ LLVLDL Sbjct: 305 FMPCCSRSRTDLLVLDL 321