BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5140.p (200 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777355.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase... 374 e-102 ref|YP_001101250.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase... 309 2e-82 ref|YP_001354955.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase... 308 2e-82 ref|YP_004754547.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase... 303 1e-80 ref|ZP_08273725.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase ... 301 5e-80 >ref|YP_003777355.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Herbaspirillum seropedicae SmR1] gb|ADJ65447.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase protein [Herbaspirillum seropedicae SmR1] Length = 200 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 193/200 (96%), Positives = 198/200 (99%) Query: 1 MSNSSSQPRQRLIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRR 60 MS SSS+PRQRLIVAITGATGAIYGVRLLEHLRKHGQ+ETHLMVSEAGVLNLHQELDMRR Sbjct: 1 MSVSSSRPRQRLIVAITGATGAIYGVRLLEHLRKHGQIETHLMVSEAGVLNLHQELDMRR 60 Query: 61 KDVEALADVVHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVL 120 KDVEALADVVHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVL Sbjct: 61 KDVEALADVVHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVL 120 Query: 121 KERRRLVLMVRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLD 180 KERRRLVLMVRETPFNLAHLRNMT+VTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLD Sbjct: 121 KERRRLVLMVRETPFNLAHLRNMTAVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLD 180 Query: 181 MFGISMQLTPEWKGMKAGSD 200 MFGISMQLTPEW+GMK G+D Sbjct: 181 MFGISMQLTPEWQGMKGGAD 200 >ref|YP_001101250.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Herminiimonas arsenicoxydans] emb|CAL63129.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (Polyprenyl p-hydroxybenzoate decarboxylase) [Herminiimonas arsenicoxydans] Length = 205 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 157/193 (81%), Positives = 175/193 (90%), Gaps = 1/193 (0%) Query: 8 PR-QRLIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRRKDVEAL 66 PR QRLI+AITGATG IYG+RLL+ LR + +VETHL++SEAG+LNLHQEL M+RK+VEAL Sbjct: 13 PRPQRLIIAITGATGVIYGIRLLQVLRDNPEVETHLLISEAGMLNLHQELGMKRKEVEAL 72 Query: 67 ADVVHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVLKERRRL 126 ADVVHNVRDVGA IASGSF S GM++APCSMKTLAAVAHGLSDNLITRAADVVLKERRRL Sbjct: 73 ADVVHNVRDVGASIASGSFQSGGMIIAPCSMKTLAAVAHGLSDNLITRAADVVLKERRRL 132 Query: 127 VLMVRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLDMFGISM 186 VLMVRETPFNLAHLRNMT+VTEMGG+IFPPLPGFY RPAS+ EMVDHT+GRVLD+F I Sbjct: 133 VLMVRETPFNLAHLRNMTAVTEMGGIIFPPLPGFYHRPASIAEMVDHTVGRVLDLFEIQH 192 Query: 187 QLTPEWKGMKAGS 199 LTP W G+KA S Sbjct: 193 TLTPRWNGLKAQS 205 >ref|YP_001354955.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Janthinobacterium sp. Marseille] gb|ABR89005.1| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Janthinobacterium sp. Marseille] Length = 201 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 155/188 (82%), Positives = 169/188 (89%) Query: 9 RQRLIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRRKDVEALAD 68 R+RLI+AITGATG IYG+RLL+ LR VETHL++SEAGVLNLHQELDM+RKDVEALAD Sbjct: 13 RKRLIIAITGATGVIYGIRLLQVLRDIAGVETHLLISEAGVLNLHQELDMKRKDVEALAD 72 Query: 69 VVHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVLKERRRLVL 128 VVHNVRDVGA IASGSF S GM+VAPCSMKTLAAVAHG SDNLI+RAADVVLKERRRLVL Sbjct: 73 VVHNVRDVGAAIASGSFQSDGMIVAPCSMKTLAAVAHGFSDNLISRAADVVLKERRRLVL 132 Query: 129 MVRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLDMFGISMQL 188 MVRETPFNLAHLRNMT+VTEMGG+IFPPLPGFY RPAS+ EMVDHT GRVLD+F I L Sbjct: 133 MVRETPFNLAHLRNMTAVTEMGGIIFPPLPGFYHRPASIAEMVDHTTGRVLDLFDIPHAL 192 Query: 189 TPEWKGMK 196 TP W G+K Sbjct: 193 TPRWNGLK 200 >ref|YP_004754547.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX [Collimonas fungivorans Ter331] gb|AEK63724.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX [Collimonas fungivorans Ter331] Length = 203 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 155/194 (79%), Positives = 171/194 (88%) Query: 4 SSSQPRQRLIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRRKDV 63 + ++P +RLIV ITGATG IYGVRLL+ LR VETHLM+S+AGVLNLHQEL+MRRK V Sbjct: 9 ADTRPPRRLIVGITGATGVIYGVRLLQLLRDMPGVETHLMISDAGVLNLHQELEMRRKQV 68 Query: 64 EALADVVHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVLKER 123 EALA VVHNVRD+GA IASGSF S GM++APCSMKTLA+VA+GLSDNLITRAADVVLKER Sbjct: 69 EALAHVVHNVRDIGAAIASGSFQSDGMIIAPCSMKTLASVANGLSDNLITRAADVVLKER 128 Query: 124 RRLVLMVRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLDMFG 183 RRLVLMVRETPFNLAHLRNMTSVTEMGGVIFPPLPGFY RP S+ EMVDHTLGRVLD+F Sbjct: 129 RRLVLMVRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYHRPQSIAEMVDHTLGRVLDLFA 188 Query: 184 ISMQLTPEWKGMKA 197 I LTP W G+KA Sbjct: 189 IQHTLTPRWNGLKA 202 >ref|ZP_08273725.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX [Oxalobacteraceae bacterium IMCC9480] gb|EGF32803.1| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX [Oxalobacteraceae bacterium IMCC9480] Length = 198 Score = 301 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 156/193 (80%), Positives = 174/193 (90%), Gaps = 1/193 (0%) Query: 5 SSQPRQRLIVAITGATGAIYGVRLLEHLRKHGQVETHLMVSEAGVLNLHQELDMRRKDVE 64 ++ PR RLI+AITGATG+IYGVRLL+ LR G +ETHLMVSE+GVLNLH ELDM RK V Sbjct: 4 AAAPR-RLIIAITGATGSIYGVRLLQVLRDIGGIETHLMVSESGVLNLHHELDMDRKQVG 62 Query: 65 ALADVVHNVRDVGACIASGSFASTGMVVAPCSMKTLAAVAHGLSDNLITRAADVVLKERR 124 ALADVVHNVRDVGA IASGSF S GM+VAPCSMKTLA+VA G+SDNLITRAADVVLKERR Sbjct: 63 ALADVVHNVRDVGASIASGSFQSDGMIVAPCSMKTLASVAMGMSDNLITRAADVVLKERR 122 Query: 125 RLVLMVRETPFNLAHLRNMTSVTEMGGVIFPPLPGFYQRPASMEEMVDHTLGRVLDMFGI 184 RL+LMVRETPFNLAHLRNMTSVTEMGG+IFPPLPGFYQRPAS+ EMVDHT+GRVLDM G+ Sbjct: 123 RLILMVRETPFNLAHLRNMTSVTEMGGIIFPPLPGFYQRPASIAEMVDHTVGRVLDMVGV 182 Query: 185 SMQLTPEWKGMKA 197 + Q+TP W G+KA Sbjct: 183 THQMTPRWGGLKA 195