BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5127.p (287 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777344.1| phytanoyl-CoA dioxygenase [Herbaspirillum se... 466 e-129 ref|YP_004751131.1| putative deoxygenase [Collimonas fungivorans... 350 1e-94 ref|YP_001101542.1| putative deoxygenase [Herminiimonas arsenico... 315 7e-84 ref|YP_001355239.1| phytanoyl-CoA dioxygenase [Janthinobacterium... 306 2e-81 ref|ZP_08276152.1| Phytanoyl-CoA dioxygenase [Oxalobacteraceae b... 302 4e-80 >ref|YP_003777344.1| phytanoyl-CoA dioxygenase [Herbaspirillum seropedicae SmR1] gb|ADJ65436.1| phytanoyl-CoA dioxygenase protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 235/255 (92%), Positives = 242/255 (94%) Query: 33 MSNPLSPAQVAFFREQGYLLLKGMVPDALRERLLAVTQDHLQRAVAPLEYEAEVGYEGAP 92 MS PLS QVAFFREQGYLLLKGMVP LRER+LAVT+DHLQRAVAPLEYEAEVGYEGAP Sbjct: 1 MSKPLSSTQVAFFREQGYLLLKGMVPADLRERMLAVTRDHLQRAVAPLEYEAEVGYEGAP 60 Query: 93 VSLEAEGGRTARRLRAAWQRDPVYREWAADPQLVAMLHQLFEEPVRLTLAHHNCIMTKHP 152 SLEAEGGRTARRLRAAWQRDPVYREWA LVA+LHQLF+EPV +TLAHHNC+MTKHP Sbjct: 61 ASLEAEGGRTARRLRAAWQRDPVYREWAGSRALVAILHQLFDEPVCITLAHHNCVMTKHP 120 Query: 153 AFGTATGWHRDIRYWSFPRNELISVWLALGAETPENGALKFIPGSHKLKLQPEQMDELDF 212 AFGTATGWHRDIRYWSFPRNELISVWLALGAETPENGALKFIPGSHKLKLQPEQMDELDF Sbjct: 121 AFGTATGWHRDIRYWSFPRNELISVWLALGAETPENGALKFIPGSHKLKLQPEQMDELDF 180 Query: 213 LRPDVAANQALFAQGIALSLEPGDVVLFHSGLFHAAGRNDSEQVKCSAVFAYHGKSNPPL 272 LRPDVAANQALFAQGIALSLEPGDVVLFHSGLFHAAGRNDS+QVKCSAVFAYHG SNPPL Sbjct: 181 LRPDVAANQALFAQGIALSLEPGDVVLFHSGLFHAAGRNDSDQVKCSAVFAYHGASNPPL 240 Query: 273 PGTRSAASEDLPLED 287 GTRSAASEDLPLED Sbjct: 241 AGTRSAASEDLPLED 255 >ref|YP_004751131.1| putative deoxygenase [Collimonas fungivorans Ter331] gb|AEK60308.1| putative deoxygenase [Collimonas fungivorans Ter331] Length = 274 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 175/252 (69%), Positives = 203/252 (80%) Query: 34 SNPLSPAQVAFFREQGYLLLKGMVPDALRERLLAVTQDHLQRAVAPLEYEAEVGYEGAPV 93 S LS AQ+ F + GYL+L +VP A E + A HL +AVAPLEYE+EVGY GAP Sbjct: 21 SPALSAAQIDAFEKDGYLVLPHLVPAADCELMAATANAHLAQAVAPLEYESEVGYAGAPK 80 Query: 94 SLEAEGGRTARRLRAAWQRDPVYREWAADPQLVAMLHQLFEEPVRLTLAHHNCIMTKHPA 153 SL++ GGRTARRLR A+QRD YR WA +PQLVAML L E V LTL+HHNC+MTKHP Sbjct: 81 SLDSAGGRTARRLRNAYQRDGSYRAWATNPQLVAMLELLLGEAVCLTLSHHNCVMTKHPH 140 Query: 154 FGTATGWHRDIRYWSFPRNELISVWLALGAETPENGALKFIPGSHKLKLQPEQMDELDFL 213 FGTATGWHRDIRYWSFPRNELISVWLAL +E NG L+FIPGSH+ ++PEQMDELDFL Sbjct: 141 FGTATGWHRDIRYWSFPRNELISVWLALDSENANNGGLRFIPGSHRFDIKPEQMDELDFL 200 Query: 214 RPDVAANQALFAQGIALSLEPGDVVLFHSGLFHAAGRNDSEQVKCSAVFAYHGKSNPPLP 273 RP+VAANQALFAQG ++ L+ GDVV FHSGLFHAAGRN+++ VK S VFAYHGKSNPP+P Sbjct: 201 RPEVAANQALFAQGKSVELQQGDVVFFHSGLFHAAGRNNTDTVKESVVFAYHGKSNPPVP 260 Query: 274 GTRSAASEDLPL 285 G+RSAASED+ L Sbjct: 261 GSRSAASEDILL 272 >ref|YP_001101542.1| putative deoxygenase [Herminiimonas arsenicoxydans] emb|CAL63421.1| Putative deoxygenases [Herminiimonas arsenicoxydans] Length = 263 Score = 315 bits (806), Expect = 7e-84, Method: Composition-based stats. Identities = 156/257 (60%), Positives = 191/257 (74%) Query: 31 SIMSNPLSPAQVAFFREQGYLLLKGMVPDALRERLLAVTQDHLQRAVAPLEYEAEVGYEG 90 + M LS Q+ FR +GYL+ + M+ A ER+L V + L+ A+ PLEYEAE+GY G Sbjct: 7 TAMDTALSSEQMLQFRNKGYLVFRAMLEPAACERMLKVAAEQLRAALPPLEYEAELGYAG 66 Query: 91 APVSLEAEGGRTARRLRAAWQRDPVYREWAADPQLVAMLHQLFEEPVRLTLAHHNCIMTK 150 AP SLEAEGGRT RRLR A+ R+ + WA D ++V+ L QLF+EPV LTLAHHNC+MTK Sbjct: 67 APASLEAEGGRTVRRLRGAYDREACFHAWAQDARVVSRLRQLFDEPVCLTLAHHNCVMTK 126 Query: 151 HPAFGTATGWHRDIRYWSFPRNELISVWLALGAETPENGALKFIPGSHKLKLQPEQMDEL 210 HP +GTATGWHRDIRYWSF + +LI VWLALG ET +NG LKFIPGSH+L + P+Q+DEL Sbjct: 127 HPQYGTATGWHRDIRYWSFTQPDLICVWLALGNETADNGGLKFIPGSHRLHIAPDQLDEL 186 Query: 211 DFLRPDVAANQALFAQGIALSLEPGDVVLFHSGLFHAAGRNDSEQVKCSAVFAYHGKSNP 270 DFLRP+ ANQA+FAQG + L+ GDVV FHS LFHAAG N + VK S FAYHG SN Sbjct: 187 DFLRPEHPANQAIFAQGKIVELQQGDVVFFHSRLFHAAGVNATSAVKTSVAFAYHGCSNQ 246 Query: 271 PLPGTRSAASEDLPLED 287 + G+RSAAS D+ L D Sbjct: 247 AIAGSRSAASPDIRLTD 263 >ref|YP_001355239.1| phytanoyl-CoA dioxygenase [Janthinobacterium sp. Marseille] gb|ABR90237.1| phytanoyl-CoA dioxygenase [Janthinobacterium sp. Marseille] Length = 255 Score = 306 bits (785), Expect = 2e-81, Method: Composition-based stats. Identities = 153/255 (60%), Positives = 184/255 (72%) Query: 33 MSNPLSPAQVAFFREQGYLLLKGMVPDALRERLLAVTQDHLQRAVAPLEYEAEVGYEGAP 92 M LS AQ+A F + GYL+ + ++ A E +LAV + LQ A PLEYEAE+GY GAP Sbjct: 1 MDTALSGAQIAQFEKDGYLVFRKLLEPAACEHMLAVAKTQLQAAQQPLEYEAELGYPGAP 60 Query: 93 VSLEAEGGRTARRLRAAWQRDPVYREWAADPQLVAMLHQLFEEPVRLTLAHHNCIMTKHP 152 SL+AEGGRT RRLR A+ RDP + +WA DP++V L QLF E + LTLAHHN +MTKHP Sbjct: 61 SSLDAEGGRTVRRLRGAYHRDPCFHDWAHDPRIVDKLKQLFGEQLYLTLAHHNSVMTKHP 120 Query: 153 AFGTATGWHRDIRYWSFPRNELISVWLALGAETPENGALKFIPGSHKLKLQPEQMDELDF 212 FGTATGWHRDIRYWSF + +LI VWLALG E NG LKFIPGSH+L + Q+D+LDF Sbjct: 121 QFGTATGWHRDIRYWSFTKPDLICVWLALGDEIAANGGLKFIPGSHRLDISRAQLDDLDF 180 Query: 213 LRPDVAANQALFAQGIALSLEPGDVVLFHSGLFHAAGRNDSEQVKCSAVFAYHGKSNPPL 272 LRPD A N+ALFAQG + L GDVV FHS LFHAAG N + VK S FAYHG SN L Sbjct: 181 LRPDYAPNEALFAQGQPVDLHQGDVVFFHSKLFHAAGVNTTPSVKTSVAFAYHGSSNQAL 240 Query: 273 PGTRSAASEDLPLED 287 PG+RS+ + +P+ D Sbjct: 241 PGSRSSIAGSVPISD 255 >ref|ZP_08276152.1| Phytanoyl-CoA dioxygenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30375.1| Phytanoyl-CoA dioxygenase [Oxalobacteraceae bacterium IMCC9480] Length = 253 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 153/249 (61%), Positives = 182/249 (73%) Query: 37 LSPAQVAFFREQGYLLLKGMVPDALRERLLAVTQDHLQRAVAPLEYEAEVGYEGAPVSLE 96 LS Q+ FR+ GYL+L+ V A L AV D LQ A AP+EYEA+VGY GAP + + Sbjct: 4 LSSGQIVRFRDDGYLVLRQRVSAADCAALRAVVSDDLQIAAAPVEYEADVGYAGAPATRD 63 Query: 97 AEGGRTARRLRAAWQRDPVYREWAADPQLVAMLHQLFEEPVRLTLAHHNCIMTKHPAFGT 156 A GGRT RRLR AWQR P+ ++WAADP LVAML QLF +PV L LAHHNC+MTKHP GT Sbjct: 64 APGGRTVRRLRGAWQRHPLLQQWAADPALVAMLGQLFGQPVVLNLAHHNCVMTKHPDLGT 123 Query: 157 ATGWHRDIRYWSFPRNELISVWLALGAETPENGALKFIPGSHKLKLQPEQMDELDFLRPD 216 ATGWHRDIRYWSF LI+VWLALG E NG L+ +PGSH+ ++ P+Q+D LDFLRPD Sbjct: 124 ATGWHRDIRYWSFTDANLITVWLALGREDAGNGGLQVLPGSHRWQIAPDQLDALDFLRPD 183 Query: 217 VAANQALFAQGIALSLEPGDVVLFHSGLFHAAGRNDSEQVKCSAVFAYHGKSNPPLPGTR 276 +A NQAL AQG+ LSL GDV+LFHS LFHAAG N S + K S FAY G N PL G+R Sbjct: 184 LARNQALMAQGVTLSLAEGDVLLFHSSLFHAAGTNRSGERKFSVAFAYRGADNLPLAGSR 243 Query: 277 SAASEDLPL 285 SAA+ ++ L Sbjct: 244 SAAAGEVAL 252