BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5126.p (955 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777343.1| excinuclease ATPase subunit [Herbaspirillum ... 1909 0.0 ref|YP_004751132.1| excinuclease ABC subunit A [Collimonas fungi... 1784 0.0 ref|YP_001355031.1| excinuclease ABC subunit A [Janthinobacteriu... 1741 0.0 ref|YP_001101328.1| DNA excision repair enzyme subunit, with Uvr... 1724 0.0 ref|ZP_04579393.1| UvrABC system protein A [Oxalobacter formigen... 1595 0.0 >ref|YP_003777343.1| excinuclease ATPase subunit [Herbaspirillum seropedicae SmR1] gb|ADJ65435.1| excinuclease ATPase subunit protein [Herbaspirillum seropedicae SmR1] Length = 952 Score = 1909 bits (4946), Expect = 0.0, Method: Composition-based stats. Identities = 944/952 (99%), Positives = 948/952 (99%) Query: 1 MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLQLMEKPDVDMIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC 120 ARQFLQLMEKPDVDMIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC Sbjct: 61 ARQFLQLMEKPDVDMIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC 120 Query: 121 PDHPEHPLEAQSVSQMVDAVLALPEDTKLMIMAPVVANRKGEHVDLFEEMQAQGFVRFRI 180 PDHPEHPLEAQSVSQMVDAVLALPEDTKLMIMAPVVANRKGEH DLFEEMQAQGFVRFRI Sbjct: 121 PDHPEHPLEAQSVSQMVDAVLALPEDTKLMIMAPVVANRKGEHADLFEEMQAQGFVRFRI 180 Query: 181 QSGTGSAKVYEVDDLPKLKKTEKHTIDVVIDRVKVKAEIKQRLAESFETALRLADGRAIA 240 QSGTG+AKVYEVDDLPKLKKTEKHTIDVVIDRVKVKA+IKQRLAESFETALRLADGRAIA Sbjct: 181 QSGTGTAKVYEVDDLPKLKKTEKHTIDVVIDRVKVKADIKQRLAESFETALRLADGRAIA 240 Query: 241 LEMDSGKEHLYSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA 300 LEMDSGKEHLYSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA Sbjct: 241 LEMDSGKEHLYSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA 300 Query: 301 FPNLSLASGAIKGWDRRNQFYFQMLTSIAAYYGFDLDVPFEQLDDKAQQAVLYGSGRQTI 360 FPNLSLASGAIKGWDRRNQFYFQMLTSIAAYYGFDLDVPFEQLDDKAQQAVLYGSGRQTI Sbjct: 301 FPNLSLASGAIKGWDRRNQFYFQMLTSIAAYYGFDLDVPFEQLDDKAQQAVLYGSGRQTI 360 Query: 361 PFAYVNERGRTVVKEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKQCPSCHGARLRV 420 PFAYVNERGRTVVKEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKQCPSCHGARLRV Sbjct: 361 PFAYVNERGRTVVKEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKQCPSCHGARLRV 420 Query: 421 EARYVKVGSGKQQRAIYEVAATPLRETLSFFETLKLTGAKKEIADRIIKEIVSRLTFLNN 480 EARYVKVGSGKQQRAIYEVAATPLRETLSFFETLKLTGAKKEIADRIIKEIVSRLTFLNN Sbjct: 421 EARYVKVGSGKQQRAIYEVAATPLRETLSFFETLKLTGAKKEIADRIIKEIVSRLTFLNN 480 Query: 481 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIDTLK 540 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIDTLK Sbjct: 481 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIDTLK 540 Query: 541 HLRDIGNTVLVVEHDEDAIRTADYVVDMGIGAGVHGGDVIAHGSLPDILKNKKSLTAKYL 600 HLRDIGNTVLVVEHDEDAIRTADYVVDMGIGAGVHGGDVIAHG LPDILKNKKSLTAKYL Sbjct: 541 HLRDIGNTVLVVEHDEDAIRTADYVVDMGIGAGVHGGDVIAHGPLPDILKNKKSLTAKYL 600 Query: 601 NGSLEIAVPKKRTPCDESRMLTITGATGNNLKNVDLELPVGLLTCVTGVSGSGKSTLVND 660 NGSLEIAVPKKRTPCDESRMLTI+GATGNNLKNVDLELPVGLLTCVTGVSGSGKSTLVND Sbjct: 601 NGSLEIAVPKKRTPCDESRMLTISGATGNNLKNVDLELPVGLLTCVTGVSGSGKSTLVND 660 Query: 661 TLYLSAARHLYGSQTEPAEHEAIGGLEHFDKVIAVDQAPIGRTPRSNPATYTGLFTPIRD 720 TLYLSAARHLYGSQTEPA HEAIGGLEHFDKVIAVDQAPIGRTPRSNPATYTGLFTPIRD Sbjct: 661 TLYLSAARHLYGSQTEPAAHEAIGGLEHFDKVIAVDQAPIGRTPRSNPATYTGLFTPIRD 720 Query: 721 LFATVPMAKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNR 780 LFATVPMAKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNR Sbjct: 721 LFATVPMAKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNR 780 Query: 781 ETLEVQYKGKNITEILDMTVEDAHEFFKPVPLIARKLQTLLDVGLGYIKLGQSATTLSGG 840 ETLEVQYKGKNITEILDMTVEDAHEFFKPVPLIARKLQTLLDVGLGYIKLGQSATTLSGG Sbjct: 781 ETLEVQYKGKNITEILDMTVEDAHEFFKPVPLIARKLQTLLDVGLGYIKLGQSATTLSGG 840 Query: 841 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVTIIEHNLD 900 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVTIIEHNLD Sbjct: 841 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVTIIEHNLD 900 Query: 901 VIKTADWIIDLGPEGGAGGGRIVAAGTPEDVAKNPASVTGKYLGPLLKKKSK 952 VIKTADWIIDLGPEGGAGGGRIVAAGTPE+VAKNPASVTGKYL PLLKKKSK Sbjct: 901 VIKTADWIIDLGPEGGAGGGRIVAAGTPEEVAKNPASVTGKYLAPLLKKKSK 952 >ref|YP_004751132.1| excinuclease ABC subunit A [Collimonas fungivorans Ter331] gb|AEK60309.1| Excinuclease ABC subunit A [Collimonas fungivorans Ter331] Length = 953 Score = 1784 bits (4621), Expect = 0.0, Method: Composition-based stats. Identities = 869/953 (91%), Positives = 922/953 (96%) Query: 1 MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLS+Y Sbjct: 1 MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSSY 60 Query: 61 ARQFLQLMEKPDVDMIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC 120 ARQFLQLMEKPDVD+IEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC Sbjct: 61 ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC 120 Query: 121 PDHPEHPLEAQSVSQMVDAVLALPEDTKLMIMAPVVANRKGEHVDLFEEMQAQGFVRFRI 180 PDHPE PL AQSVSQMVDAVLA+P+DTKLMI+APVVANRKGEHVDLFE+MQAQGFVRFRI Sbjct: 121 PDHPEKPLAAQSVSQMVDAVLAMPDDTKLMILAPVVANRKGEHVDLFEQMQAQGFVRFRI 180 Query: 181 QSGTGSAKVYEVDDLPKLKKTEKHTIDVVIDRVKVKAEIKQRLAESFETALRLADGRAIA 240 QSGTG+AK+YEVDDLPKLKKTEKHTIDVVIDR+KVKA+ KQRLAESFETALRLA+GRAIA Sbjct: 181 QSGTGAAKIYEVDDLPKLKKTEKHTIDVVIDRLKVKADTKQRLAESFETALRLAEGRAIA 240 Query: 241 LEMDSGKEHLYSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA 300 LEMDSG EH+YSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA Sbjct: 241 LEMDSGTEHMYSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA 300 Query: 301 FPNLSLASGAIKGWDRRNQFYFQMLTSIAAYYGFDLDVPFEQLDDKAQQAVLYGSGRQTI 360 FPNLSLASGA+KGWDRRNQFYFQMLTSIAA+Y FD+DVPFE+L +KAQQAVLYGSG++TI Sbjct: 301 FPNLSLASGAVKGWDRRNQFYFQMLTSIAAHYAFDIDVPFEKLPEKAQQAVLYGSGKETI 360 Query: 361 PFAYVNERGRTVVKEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKQCPSCHGARLRV 420 PF+YVNERGRTV+KEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEK+CPSCHGARLRV Sbjct: 361 PFSYVNERGRTVIKEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKECPSCHGARLRV 420 Query: 421 EARYVKVGSGKQQRAIYEVAATPLRETLSFFETLKLTGAKKEIADRIIKEIVSRLTFLNN 480 EAR+VKVG+GKQ+RAIYEVAATPLRETL+FFE LKLTGAKKEIADRIIKEIVSRLTFLNN Sbjct: 421 EARFVKVGNGKQERAIYEVAATPLRETLTFFEKLKLTGAKKEIADRIIKEIVSRLTFLNN 480 Query: 481 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIDTLK 540 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI+TL+ Sbjct: 481 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIETLR 540 Query: 541 HLRDIGNTVLVVEHDEDAIRTADYVVDMGIGAGVHGGDVIAHGSLPDILKNKKSLTAKYL 600 HLRDIGN+VLVVEHDEDAIRTADYVVDMG+GAGVHGG+VIA G+L ILK+KKSLTAKYL Sbjct: 541 HLRDIGNSVLVVEHDEDAIRTADYVVDMGLGAGVHGGEVIAEGTLEQILKSKKSLTAKYL 600 Query: 601 NGSLEIAVPKKRTPCDESRMLTITGATGNNLKNVDLELPVGLLTCVTGVSGSGKSTLVND 660 NG+L+IAVP+KR P D R ITGATGNNLKNV + LPVGLLTCVTGVSGSGKSTLVND Sbjct: 601 NGTLKIAVPEKRIPADPDRQFIITGATGNNLKNVTMNLPVGLLTCVTGVSGSGKSTLVND 660 Query: 661 TLYLSAARHLYGSQTEPAEHEAIGGLEHFDKVIAVDQAPIGRTPRSNPATYTGLFTPIRD 720 TLY +AARHLYGSQ EPA HE+IGGLEHFDKVI+VDQAPIGRTPRSNPATYTGLFTPIRD Sbjct: 661 TLYHAAARHLYGSQAEPAAHESIGGLEHFDKVISVDQAPIGRTPRSNPATYTGLFTPIRD 720 Query: 721 LFATVPMAKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNR 780 LF+TVPMAKERGY+AGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNR Sbjct: 721 LFSTVPMAKERGYNAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNR 780 Query: 781 ETLEVQYKGKNITEILDMTVEDAHEFFKPVPLIARKLQTLLDVGLGYIKLGQSATTLSGG 840 ETLEV YKGK+ITE+L MTVE+A+EFFKPVP+IARKL TLLDVGLGYI+LGQSATTLSGG Sbjct: 781 ETLEVHYKGKSITEVLGMTVEEAYEFFKPVPVIARKLHTLLDVGLGYIRLGQSATTLSGG 840 Query: 841 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVTIIEHNLD 900 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLR+QGNTV IIEHNLD Sbjct: 841 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRNQGNTVVIIEHNLD 900 Query: 901 VIKTADWIIDLGPEGGAGGGRIVAAGTPEDVAKNPASVTGKYLGPLLKKKSKQ 953 VIKTADW+IDLGPEGGAGGGRI+A GTPE VA NPASVTGKYLGPLL+K K+ Sbjct: 901 VIKTADWLIDLGPEGGAGGGRIIATGTPEQVAANPASVTGKYLGPLLEKPKKK 953 >ref|YP_001355031.1| excinuclease ABC subunit A [Janthinobacterium sp. Marseille] gb|ABR89433.1| excinuclease ABC subunit A [Janthinobacterium sp. Marseille] Length = 954 Score = 1741 bits (4510), Expect = 0.0, Method: Composition-based stats. Identities = 847/950 (89%), Positives = 907/950 (95%) Query: 1 MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+EIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLQLMEKPDVDMIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC 120 ARQFLQLMEKPDVD+IEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC Sbjct: 61 ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC 120 Query: 121 PDHPEHPLEAQSVSQMVDAVLALPEDTKLMIMAPVVANRKGEHVDLFEEMQAQGFVRFRI 180 PDHPE+PL AQSVSQMVDAVLA+PEDTKLMIMAPVVANRKGEHVDLFE+MQAQGFVRFR+ Sbjct: 121 PDHPENPLAAQSVSQMVDAVLAMPEDTKLMIMAPVVANRKGEHVDLFEQMQAQGFVRFRV 180 Query: 181 QSGTGSAKVYEVDDLPKLKKTEKHTIDVVIDRVKVKAEIKQRLAESFETALRLADGRAIA 240 QSGT +A +Y+VD LPKLKK EKHTIDVVIDR+KVKA+IKQRLAESFETALRLA+GRA+ Sbjct: 181 QSGTNNAHIYDVDALPKLKKAEKHTIDVVIDRIKVKADIKQRLAESFETALRLAEGRALV 240 Query: 241 LEMDSGKEHLYSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA 300 LEMDSG EHLYSNKFACP+CGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA Sbjct: 241 LEMDSGVEHLYSNKFACPVCGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA 300 Query: 301 FPNLSLASGAIKGWDRRNQFYFQMLTSIAAYYGFDLDVPFEQLDDKAQQAVLYGSGRQTI 360 FPNLSLASGA+KGWDRRNQFYFQML+++A YY FD+D+PFE+L + AQQAVL+GSG+Q I Sbjct: 301 FPNLSLASGAVKGWDRRNQFYFQMLSNLAEYYDFDIDMPFEKLPEAAQQAVLFGSGKQNI 360 Query: 361 PFAYVNERGRTVVKEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKQCPSCHGARLRV 420 PF YVNE+GRTV++EHTFEGVVNNLQRRYRETDSMAVKEELAKFINEK+CPSC GARLRV Sbjct: 361 PFTYVNEKGRTVIREHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKECPSCQGARLRV 420 Query: 421 EARYVKVGSGKQQRAIYEVAATPLRETLSFFETLKLTGAKKEIADRIIKEIVSRLTFLNN 480 EAR V VG+GKQ+RAI+EVAATPLR+TL FFETL LTGAKKEIADRIIKEIVSRL FLNN Sbjct: 421 EARNVMVGNGKQKRAIFEVAATPLRQTLEFFETLVLTGAKKEIADRIIKEIVSRLKFLNN 480 Query: 481 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIDTLK 540 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI+TLK Sbjct: 481 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIETLK 540 Query: 541 HLRDIGNTVLVVEHDEDAIRTADYVVDMGIGAGVHGGDVIAHGSLPDILKNKKSLTAKYL 600 HLRDIGN+VLVVEHDEDAIR ADYVVDMGIGAGVHGG+VIA G+L DILK+KKSLTA+YL Sbjct: 541 HLRDIGNSVLVVEHDEDAIRCADYVVDMGIGAGVHGGEVIAEGTLKDILKSKKSLTAQYL 600 Query: 601 NGSLEIAVPKKRTPCDESRMLTITGATGNNLKNVDLELPVGLLTCVTGVSGSGKSTLVND 660 NG+L IAVPKKRTP + + ITGATGNNLKNV LELPVGLLTCVTGVSGSGKSTLVND Sbjct: 601 NGTLGIAVPKKRTPPNPKKQFVITGATGNNLKNVTLELPVGLLTCVTGVSGSGKSTLVND 660 Query: 661 TLYLSAARHLYGSQTEPAEHEAIGGLEHFDKVIAVDQAPIGRTPRSNPATYTGLFTPIRD 720 TLY +A+RHLYGSQ EPA H++I G EHFDKVI+VDQAPIGRTPRSNPATYTGLFTPIRD Sbjct: 661 TLYHAASRHLYGSQAEPAPHDSISGFEHFDKVISVDQAPIGRTPRSNPATYTGLFTPIRD 720 Query: 721 LFATVPMAKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNR 780 LFATVP +KERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHG RYNR Sbjct: 721 LFATVPTSKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGNRYNR 780 Query: 781 ETLEVQYKGKNITEILDMTVEDAHEFFKPVPLIARKLQTLLDVGLGYIKLGQSATTLSGG 840 ETLE+QYKGKNITE+L MTVE+AH FFKPVP+IARKLQTLLDVGLGYI+LGQSATTLSGG Sbjct: 781 ETLEIQYKGKNITEVLGMTVEEAHVFFKPVPVIARKLQTLLDVGLGYIRLGQSATTLSGG 840 Query: 841 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVTIIEHNLD 900 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTV IIEHNLD Sbjct: 841 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVVIIEHNLD 900 Query: 901 VIKTADWIIDLGPEGGAGGGRIVAAGTPEDVAKNPASVTGKYLGPLLKKK 950 VIKTADW++D+GPEGGAGGG+++ AGTPED+AKNPAS TGKYL PLLK+K Sbjct: 901 VIKTADWLVDMGPEGGAGGGQVIGAGTPEDLAKNPASFTGKYLAPLLKQK 950 >ref|YP_001101328.1| DNA excision repair enzyme subunit, with UvrBC [Herminiimonas arsenicoxydans] emb|CAL63207.1| UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) [Herminiimonas arsenicoxydans] Length = 954 Score = 1724 bits (4465), Expect = 0.0, Method: Composition-based stats. Identities = 839/950 (88%), Positives = 902/950 (94%) Query: 1 MEEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 M+EIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY Sbjct: 1 MDEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60 Query: 61 ARQFLQLMEKPDVDMIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC 120 ARQFLQLMEKPDVD+IEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC Sbjct: 61 ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC 120 Query: 121 PDHPEHPLEAQSVSQMVDAVLALPEDTKLMIMAPVVANRKGEHVDLFEEMQAQGFVRFRI 180 PDHPE+PL AQSVSQMVDAVLA+PEDTKLMIMAPVVANRKGEH+DLFE+MQAQGFVRFR+ Sbjct: 121 PDHPENPLAAQSVSQMVDAVLAMPEDTKLMIMAPVVANRKGEHLDLFEQMQAQGFVRFRV 180 Query: 181 QSGTGSAKVYEVDDLPKLKKTEKHTIDVVIDRVKVKAEIKQRLAESFETALRLADGRAIA 240 QSGTG+A +Y+VD LPKLKK EKHTI VVIDR+KVK +IKQRLAESFETALRLA+GRA+ Sbjct: 181 QSGTGNAHIYDVDALPKLKKAEKHTIAVVIDRIKVKPDIKQRLAESFETALRLAEGRALV 240 Query: 241 LEMDSGKEHLYSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA 300 LEMD+G E LYSNKFACP+CGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA Sbjct: 241 LEMDTGVEQLYSNKFACPVCGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVA 300 Query: 301 FPNLSLASGAIKGWDRRNQFYFQMLTSIAAYYGFDLDVPFEQLDDKAQQAVLYGSGRQTI 360 FPNLSLASGA+KGWDRRNQFYFQML+++A +Y FD+DVPFE+L + AQQAVL+GSG+Q I Sbjct: 301 FPNLSLASGAVKGWDRRNQFYFQMLSNLAEFYDFDIDVPFEKLPEVAQQAVLFGSGKQKI 360 Query: 361 PFAYVNERGRTVVKEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKQCPSCHGARLRV 420 PF YVNE+GRTV++EH FEGVVNNLQRRYRETDSMAVKEELAKFINEK+CPSCHGARLRV Sbjct: 361 PFTYVNEKGRTVIREHEFEGVVNNLQRRYRETDSMAVKEELAKFINEKECPSCHGARLRV 420 Query: 421 EARYVKVGSGKQQRAIYEVAATPLRETLSFFETLKLTGAKKEIADRIIKEIVSRLTFLNN 480 EAR V VG+G+Q+RAIYEVAATPLR+TL FFETL LTGAKKEIADRI+KEI+SRL FLNN Sbjct: 421 EARNVLVGNGEQKRAIYEVAATPLRQTLEFFETLTLTGAKKEIADRIVKEIISRLKFLNN 480 Query: 481 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIDTLK 540 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI+TLK Sbjct: 481 VGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIETLK 540 Query: 541 HLRDIGNTVLVVEHDEDAIRTADYVVDMGIGAGVHGGDVIAHGSLPDILKNKKSLTAKYL 600 HLRDIGN+VLVVEHDEDAIR ADYVVDMGIGAGVHGG+VIA G+L DILK+K SLTA+YL Sbjct: 541 HLRDIGNSVLVVEHDEDAIRCADYVVDMGIGAGVHGGEVIAEGTLKDILKSKTSLTAQYL 600 Query: 601 NGSLEIAVPKKRTPCDESRMLTITGATGNNLKNVDLELPVGLLTCVTGVSGSGKSTLVND 660 NG+L IAVPKKRT + + ITGATGNNLK+V LELPVGLLTCVTGVSGSGKSTLVND Sbjct: 601 NGTLGIAVPKKRTLPNPKKQFVITGATGNNLKDVTLELPVGLLTCVTGVSGSGKSTLVND 660 Query: 661 TLYLSAARHLYGSQTEPAEHEAIGGLEHFDKVIAVDQAPIGRTPRSNPATYTGLFTPIRD 720 TLY +A+RHLYGSQ EPA HE+I G EHFDKVI+VDQAPIGRTPRSNPATYTGLFTPIRD Sbjct: 661 TLYHAASRHLYGSQAEPAAHESISGFEHFDKVISVDQAPIGRTPRSNPATYTGLFTPIRD 720 Query: 721 LFATVPMAKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNR 780 LFATVP +KERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHG RYNR Sbjct: 721 LFATVPTSKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGNRYNR 780 Query: 781 ETLEVQYKGKNITEILDMTVEDAHEFFKPVPLIARKLQTLLDVGLGYIKLGQSATTLSGG 840 ET+E+ YKGKNITE+L+MTVE+AH FFKPVPLIARKLQTLLDVGLGYI+LGQSATTLSGG Sbjct: 781 ETMEIHYKGKNITEVLNMTVEEAHVFFKPVPLIARKLQTLLDVGLGYIRLGQSATTLSGG 840 Query: 841 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVTIIEHNLD 900 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTV IIEHNLD Sbjct: 841 EAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVVIIEHNLD 900 Query: 901 VIKTADWIIDLGPEGGAGGGRIVAAGTPEDVAKNPASVTGKYLGPLLKKK 950 VIKTADW+ID+GPEGGAGGG+I+ +GTPED+AKNPAS TGKYL PLLK K Sbjct: 901 VIKTADWLIDMGPEGGAGGGQIIGSGTPEDLAKNPASFTGKYLAPLLKLK 950 >ref|ZP_04579393.1| UvrABC system protein A [Oxalobacter formigenes OXCC13] gb|EEO30366.1| UvrABC system protein A [Oxalobacter formigenes OXCC13] Length = 954 Score = 1595 bits (4131), Expect = 0.0, Method: Composition-based stats. Identities = 766/948 (80%), Positives = 864/948 (91%) Query: 3 EIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62 +I IRGARTHNLKNI +DLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR Sbjct: 7 KIVIRGARTHNLKNIQIDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 66 Query: 63 QFLQLMEKPDVDMIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYCPD 122 QFLQLMEKPDVD+IEGLSPAI+I+QKA+SHNPRST+GTVTEI+DYLRLLYARVGTP+CP+ Sbjct: 67 QFLQLMEKPDVDLIEGLSPAIAIDQKASSHNPRSTIGTVTEIYDYLRLLYARVGTPFCPE 126 Query: 123 HPEHPLEAQSVSQMVDAVLALPEDTKLMIMAPVVANRKGEHVDLFEEMQAQGFVRFRIQS 182 HPE+PL AQSVSQMVDAV+A+PE T+LMIMAPVVANRKGEHVDLFE+MQAQG++RFR+QS Sbjct: 127 HPENPLAAQSVSQMVDAVMAMPEGTRLMIMAPVVANRKGEHVDLFEQMQAQGYIRFRVQS 186 Query: 183 GTGSAKVYEVDDLPKLKKTEKHTIDVVIDRVKVKAEIKQRLAESFETALRLADGRAIALE 242 GT A V++VD +P LKK EKHTIDVV+DRVKV +IKQRLAESFETALRLA+GRA+ ++ Sbjct: 187 GTKKAAVFDVDSIPSLKKNEKHTIDVVVDRVKVNPDIKQRLAESFETALRLAEGRALTVD 246 Query: 243 MDSGKEHLYSNKFACPICGYSLQELEPRLFSFNNPMGACPECDGLGHIEFFDPKRIVAFP 302 MD+G+E ++SN+FACP+CGYS+ ELEPRLFSFNNPMGACP+CDGLGHIEFFDPKRIV P Sbjct: 247 MDTGEEQVFSNQFACPVCGYSIHELEPRLFSFNNPMGACPDCDGLGHIEFFDPKRIVLHP 306 Query: 303 NLSLASGAIKGWDRRNQFYFQMLTSIAAYYGFDLDVPFEQLDDKAQQAVLYGSGRQTIPF 362 L LASGAIK WDRRN FYFQML ++A +Y F+++ P+E L + Q+ +L+GSG++ I F Sbjct: 307 TLPLASGAIKSWDRRNPFYFQMLQALADHYHFNVETPYEDLPEDIQKVILFGSGKEKIAF 366 Query: 363 AYVNERGRTVVKEHTFEGVVNNLQRRYRETDSMAVKEELAKFINEKQCPSCHGARLRVEA 422 Y+N +GR V+EHTFEGVVNNL+RRYRETDSMAV+E+L+K INE++CP+CHGARLRVEA Sbjct: 367 TYINAQGRPWVREHTFEGVVNNLERRYRETDSMAVREDLSKLINERECPTCHGARLRVEA 426 Query: 423 RYVKVGSGKQQRAIYEVAATPLRETLSFFETLKLTGAKKEIADRIIKEIVSRLTFLNNVG 482 R+VKVG G Q R I E+ PL E L++FETL LTGAKKEIA RI+ EIVSRL FLNNVG Sbjct: 427 RFVKVGDGDQARTIDEITRLPLNEALAYFETLSLTGAKKEIASRIVNEIVSRLHFLNNVG 486 Query: 483 LDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIDTLKHL 542 LDYLSL RSA+TLSGGE+QRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI TLKHL Sbjct: 487 LDYLSLSRSAETLSGGESQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIATLKHL 546 Query: 543 RDIGNTVLVVEHDEDAIRTADYVVDMGIGAGVHGGDVIAHGSLPDILKNKKSLTAKYLNG 602 RDIGNTV+VVEHDEDAIRTAD++VDMGIGAGVHGG+V+A GS DIL++K+SLTAKYLNG Sbjct: 547 RDIGNTVIVVEHDEDAIRTADFIVDMGIGAGVHGGNVVASGSPADILQSKESLTAKYLNG 606 Query: 603 SLEIAVPKKRTPCDESRMLTITGATGNNLKNVDLELPVGLLTCVTGVSGSGKSTLVNDTL 662 SL IAVPKKR D + L I GATGNNLK V L+LPVGLLTCVTGVSGSGKSTLVNDTL Sbjct: 607 SLAIAVPKKRIKRDTDKQLVIKGATGNNLKKVTLKLPVGLLTCVTGVSGSGKSTLVNDTL 666 Query: 663 YLSAARHLYGSQTEPAEHEAIGGLEHFDKVIAVDQAPIGRTPRSNPATYTGLFTPIRDLF 722 Y + +RH+YGSQTEPA E+I GLEHFDKVI+V+QAPIGRTPRSNPATYTGLFTPIRDLF Sbjct: 667 YAAVSRHIYGSQTEPAPFESIEGLEHFDKVISVNQAPIGRTPRSNPATYTGLFTPIRDLF 726 Query: 723 ATVPMAKERGYSAGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKRYNRET 782 A VP A+ERGY+AGRFSFNVKGGRCE+CQGDGVIKVEMHFLPDVYVPCDVCHGKRYNRET Sbjct: 727 AGVPQARERGYTAGRFSFNVKGGRCESCQGDGVIKVEMHFLPDVYVPCDVCHGKRYNRET 786 Query: 783 LEVQYKGKNITEILDMTVEDAHEFFKPVPLIARKLQTLLDVGLGYIKLGQSATTLSGGEA 842 LEV YK KNI+++L+MTVE+AHEFF VP IAR+LQTLLDVGLGYI+LGQSATTLSGGEA Sbjct: 787 LEVTYKDKNISDVLNMTVEEAHEFFNAVPSIARRLQTLLDVGLGYIRLGQSATTLSGGEA 846 Query: 843 QRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDLLLKVIHRLRDQGNTVTIIEHNLDVI 902 QRVKLSLELSKRDTGRTLYILDEPTTGLHFHDID+LLKVIHRLRDQGNTV IIEHNLDVI Sbjct: 847 QRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIDMLLKVIHRLRDQGNTVVIIEHNLDVI 906 Query: 903 KTADWIIDLGPEGGAGGGRIVAAGTPEDVAKNPASVTGKYLGPLLKKK 950 KTADWI+DLGPEGGAGGG+I+A GTPED+AK AS+TGKYLG +LKKK Sbjct: 907 KTADWIVDLGPEGGAGGGQIIATGTPEDIAKEKASMTGKYLGSMLKKK 954 Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats. Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 7/117 (5%) Query: 616 DESRMLTITGATGNNLKNVDLELPVGLLTCVTGVSGSGKSTLVNDTLYLSAARHLYGSQT 675 +E + I GA +NLKN+ ++LP L +TG+SGSGKS+L DTLY R S + Sbjct: 3 EEQGKIVIRGARTHNLKNIQIDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLS 62 Query: 676 EPA-------EHEAIGGLEHFDKVIAVDQAPIGRTPRSNPATYTGLFTPIRDLFATV 725 A E + +E IA+DQ PRS T T ++ +R L+A V Sbjct: 63 AYARQFLQLMEKPDVDLIEGLSPAIAIDQKASSHNPRSTIGTVTEIYDYLRLLYARV 119 Score = 62.0 bits (149), Expect = 6e-07, Method: Composition-based stats. Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 13/117 (11%) Query: 2 EEIRIRGARTHNLKNINLDLPRNKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYA 61 +++ I+GA +NLK + L LP L +TG+SGSGKS+L DTLYA R Y Sbjct: 623 KQLVIKGATGNNLKKVTLKLPVGLLTCVTGVSGSGKSTLVNDTLYAAVSRH------IYG 676 Query: 62 RQFLQLMEKPDVDMIEGLS---PAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARV 115 Q E + IEGL IS+ Q PRS T T + +R L+A V Sbjct: 677 SQ----TEPAPFESIEGLEHFDKVISVNQAPIGRTPRSNPATYTGLFTPIRDLFAGV 729