BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5122.p (173 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777340.1| single-strand DNA-binding protein (helix-des... 246 6e-64 ref|YP_004751135.1| single-stranded DNA-binding protein [Collimo... 241 2e-62 ref|YP_001101326.1| ssDNA-binding protein controls activity of R... 221 3e-56 ref|YP_001355029.1| single-strand DNA-binding protein [Janthinob... 216 7e-55 ref|ZP_08506830.1| Single-stranded DNA-binding protein [Methylov... 173 7e-42 >ref|YP_003777340.1| single-strand DNA-binding protein (helix-destabilizing protein) [Herbaspirillum seropedicae SmR1] emb|CAM32653.1| single-strand DNA-binding protein (helix-destabilizing protein) [Herbaspirillum seropedicae] gb|ADJ65432.1| single-strand DNA-binding protein (helix-destabilizing protein) [Herbaspirillum seropedicae SmR1] Length = 173 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 151/173 (87%), Positives = 154/173 (89%) Query: 1 MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKKELTEWHRITFYR 60 MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKKELTEWHRITFYR Sbjct: 1 MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKKELTEWHRITFYR 60 Query: 61 KLAEIAGQYLKKGSQIYVEGRLQTRKWQDKEGVERYTTEIIADTMQMLGGRQGAGGGGGM 120 KLAEIAGQYLKKGSQIYVEGRLQTRKWQDKEGVERYTTEIIADTMQMLG RQG GGGG Sbjct: 61 KLAEIAGQYLKKGSQIYVEGRLQTRKWQDKEGVERYTTEIIADTMQMLGSRQGGGGGGMD 120 Query: 121 DEGSYGGGGGGSYGGGAPRQSAGGGAAGGGAPRQQPAQRPAPNFSDMDDDIPF 173 + G GGGGG GG + + GGG G APRQQPAQRPAPNFSDMDDDIPF Sbjct: 121 EGGYGGGGGGSYGGGAPRQSAGGGGGGGSSAPRQQPAQRPAPNFSDMDDDIPF 173 >ref|YP_004751135.1| single-stranded DNA-binding protein [Collimonas fungivorans Ter331] gb|AEK60312.1| Single-stranded DNA-binding protein [Collimonas fungivorans Ter331] Length = 190 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 137/173 (79%), Positives = 141/173 (81%), Gaps = 9/173 (5%) Query: 1 MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKKELTEWHRITFYR 60 MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKN+GEKKELTEWHRITFYR Sbjct: 27 MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNSGEKKELTEWHRITFYR 86 Query: 61 KLAEIAGQYLKKGSQIYVEGRLQTRKWQDKEGVERYTTEIIADTMQMLGGRQGAGGGGGM 120 KLAEIAGQYLKKGSQIY+EGRLQTRKWQDK+G ERYTTEIIADTMQMLG RQGAGG M Sbjct: 87 KLAEIAGQYLKKGSQIYIEGRLQTRKWQDKDGAERYTTEIIADTMQMLGSRQGAGGSAPM 146 Query: 121 DEGSYGGGGGGSYGGGAPRQSAGGGAAGGGAPRQQPAQRPAPNFSDMDDDIPF 173 D G Y AP +A RQ PA RPAPNFSDMDDDIPF Sbjct: 147 DGGDY---------NSAPPARQQNTSAPAAPARQAPASRPAPNFSDMDDDIPF 190 >ref|YP_001101326.1| ssDNA-binding protein controls activity of RecBCD nuclease [Herminiimonas arsenicoxydans] emb|CAL63205.1| Single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) [Herminiimonas arsenicoxydans] Length = 161 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 129/174 (74%), Positives = 142/174 (81%), Gaps = 14/174 (8%) Query: 1 MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKKELTEWHRITFYR 60 MASVNKVIIVGNLGRDPETRYMPNGEAVTN+AVATTESWKDK +G+KKE+TEWHRITFYR Sbjct: 1 MASVNKVIIVGNLGRDPETRYMPNGEAVTNVAVATTESWKDKTSGDKKEVTEWHRITFYR 60 Query: 61 KLAEIAGQYLKKGSQIYVEGRLQTRKWQDKEGVERYTTEIIADTMQMLGGRQGAGGGGGM 120 KLAEIAGQYLKKGS +Y+EGRLQTRKW DK+GVERYTTEIIADTMQMLGGR GAGGG Sbjct: 61 KLAEIAGQYLKKGSSVYIEGRLQTRKWTDKDGVERYTTEIIADTMQMLGGRPGAGGGSSA 120 Query: 121 DEGSYGGGGGGSYGGGAPRQSAGGGAAGGGAPRQQPAQRP-APNFSDMDDDIPF 173 + YG APRQS+ G +A +PA +P A NF+DMDDDIPF Sbjct: 121 MDDDYGS------SAPAPRQSSAGQSA-------RPAAKPAASNFNDMDDDIPF 161 >ref|YP_001355029.1| single-strand DNA-binding protein [Janthinobacterium sp. Marseille] gb|ABR89012.1| single-strand DNA-binding protein [Janthinobacterium sp. Marseille] Length = 162 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 130/173 (75%), Positives = 140/173 (80%), Gaps = 11/173 (6%) Query: 1 MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKKELTEWHRITFYR 60 MASVNKVIIVGNLGRDPETRYMPNGEAVTN+AVATTESWKDKN+G+KKE+TEWHRITFYR Sbjct: 1 MASVNKVIIVGNLGRDPETRYMPNGEAVTNVAVATTESWKDKNSGDKKEITEWHRITFYR 60 Query: 61 KLAEIAGQYLKKGSQIYVEGRLQTRKWQDKEGVERYTTEIIADTMQMLGGRQGAGGGGGM 120 KLAEIAGQYLKKGS +YVEGRLQTRKW DK+GVERYTTEIIADTMQMLGGR GAGGG Sbjct: 61 KLAEIAGQYLKKGSAVYVEGRLQTRKWTDKDGVERYTTEIIADTMQMLGGRPGAGGGSAG 120 Query: 121 DEGSYGGGGGGSYGGGAPRQSAGGGAAGGGAPRQQPAQRPAPNFSDMDDDIPF 173 + YG APRQS+GGG A A + NF+DMDDDIPF Sbjct: 121 MDDDYGS------SAPAPRQSSGGGNARPAAKPAAAS-----NFNDMDDDIPF 162 >ref|ZP_08506830.1| Single-stranded DNA-binding protein [Methyloversatilis universalis FAM5] gb|EGK69957.1| Single-stranded DNA-binding protein [Methyloversatilis universalis FAM5] Length = 180 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 88/112 (78%), Positives = 100/112 (89%) Query: 1 MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKKELTEWHRITFYR 60 MASVNKVIIVGNLGRDPETRY PNG+A+ NI VATT+SWKDK TGE+KE TEWHR++FY Sbjct: 1 MASVNKVIIVGNLGRDPETRYAPNGDAICNITVATTDSWKDKQTGERKEQTEWHRVSFYG 60 Query: 61 KLAEIAGQYLKKGSQIYVEGRLQTRKWQDKEGVERYTTEIIADTMQMLGGRQ 112 +LAEIAGQYL+KGS +YVEG L+TRKWQDKEG +RYTTEI A+ MQMLG RQ Sbjct: 61 RLAEIAGQYLRKGSPVYVEGSLRTRKWQDKEGQDRYTTEIRAEQMQMLGSRQ 112