BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5108.p (550 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777330.1| acetolactate synthase [Herbaspirillum serope... 895 0.0 ref|YP_004234190.1| benzoylformate decarboxylase [Acidovorax ave... 658 0.0 ref|XP_002945177.1| PREDICTED: benzoylformate decarboxylase-like... 643 0.0 ref|YP_003979081.1| thiamine pyrophosphate enzyme, C-terminal TP... 575 e-162 ref|YP_004353626.1| acetolactate synthase [Pseudomonas brassicac... 446 e-123 >ref|YP_003777330.1| acetolactate synthase [Herbaspirillum seropedicae SmR1] gb|ADJ65422.1| acetolactate synthase (thiamine-pyrophosphate-requiring) protein [Herbaspirillum seropedicae SmR1] Length = 550 Score = 895 bits (2314), Expect = 0.0, Method: Composition-based stats. Identities = 514/550 (93%), Positives = 528/550 (96%) Query: 1 MPQTSQPQRPGWSVQPRRSACAALAAGGKGREMTRYTGAHALWAGLLDQGVDTCFANPGT 60 MPQTSQPQRPGWSVQPRRSACAALAAGGKGREMTRYTGAHALWAGLLDQGVDTCFANPGT Sbjct: 1 MPQTSQPQRPGWSVQPRRSACAALAAGGKGREMTRYTGAHALWAGLLDQGVDTCFANPGT 60 Query: 61 TELDLVRGLESFPRLRCVVALQENVCTGAADGYGRMLGRPASTLLHLGPGFANGIANLHN 120 TELDLVRGLESFP+LRCVVALQENVCTGAADGYGRMLGRPASTLLHLGPGFANGIANLHN Sbjct: 61 TELDLVRGLESFPKLRCVVALQENVCTGAADGYGRMLGRPASTLLHLGPGFANGIANLHN 120 Query: 121 ARRARTPIVNIIGDHTSWHLPYDAPLTSDIESLARPVSGWVHRITGTDDIVSAAADSVRQ 180 ARRARTPIVNIIGDHTSWHLPYDAPL+SDIESLA PVSGWVHRITGT DI +AAA+SVRQ Sbjct: 121 ARRARTPIVNIIGDHTSWHLPYDAPLSSDIESLAHPVSGWVHRITGTADIAAAAAESVRQ 180 Query: 181 STAAGGQGSTLIFPADFQFADIAESHAVAAVEESTEPAEDYQPAQALARLREAKRVVFLL 240 STAAGGQGSTLIFPADFQ+AD+AE+ AA E+ T A+DY+ QALARL+ A+RVVFLL Sbjct: 181 STAAGGQGSTLIFPADFQYADMAEASPAAATEKDTGQADDYRADQALARLQGAQRVVFLL 240 Query: 241 GGGGEESGLGARAQRAVARIAAHTGCSVYAETFPARAERGQGLPSFDRLPYFPEPARKVL 300 GGGGEESGLGARAQRAVARIAAH GCSVYAETFPARAERGQGLPSFDRLPYFPEPARKVL Sbjct: 241 GGGGEESGLGARAQRAVARIAAHIGCSVYAETFPARAERGQGLPSFDRLPYFPEPARKVL 300 Query: 301 DEADLVVLVGALPPITYFGYVGHPSALVAPERLLTISLPGRPAAARVEQLADALGAPPYA 360 D+ADLVVLVGALPPITYFGYVGHPSALVAPERLLTISLPGRPAA RVEQLADALGAP Y Sbjct: 301 DDADLVVLVGALPPITYFGYVGHPSALVAPERLLTISLPGRPAAGRVEQLADALGAPAYV 360 Query: 361 VPQHALPALPEGELNPQKIAAVLARELPEHAIVSVEGGTCGYPFYAVSDAARPHTVLTNT 420 PQHALP LPEGEL PQKIAAVLARELPE AIVSVEGGTCGYPFYAVSDAARPHTVLTNT Sbjct: 361 TPQHALPPLPEGELTPQKIAAVLARELPERAIVSVEGGTCGYPFYAVSDAARPHTVLTNT 420 Query: 421 GGAIGQGLPVALGAAVACPDRTVVGLLSDGSTQYTIQTLWSLAHENARVVVLIAANHQYA 480 GGAIGQGLPVALGAAVACPDRTVVGLLSDGSTQYTIQTLWSLAHENARVVVLIAANHQYA Sbjct: 421 GGAIGQGLPVALGAAVACPDRTVVGLLSDGSTQYTIQTLWSLAHENARVVVLIAANHQYA 480 Query: 481 ILRNELRRDGAPLGERAAQMTALDHPRIDWVALAQSYGVPASRAETAQQLQQQLQAAFAG 540 ILRNELRRDGAPLGERAAQMTALDHPRIDWV LAQSYGVPASRAETAQQLQQQLQAAFAG Sbjct: 481 ILRNELRRDGAPLGERAAQMTALDHPRIDWVGLAQSYGVPASRAETAQQLQQQLQAAFAG 540 Query: 541 SGPALIEMAL 550 +GPALIEMAL Sbjct: 541 TGPALIEMAL 550 >ref|YP_004234190.1| benzoylformate decarboxylase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX45623.1| Benzoylformate decarboxylase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 527 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 400/529 (75%), Positives = 428/529 (80%), Gaps = 13/529 (2%) Query: 33 MTRYTGAHALWAGLLDQGVDTCFANPGTTELDLVRGLESFPRLRCVVALQENVCTGAADG 92 M R TGAHALW L +GVDTCFANPGTTELDLVR LE +RCVV LQEN+CTGAADG Sbjct: 1 MNRLTGAHALWTALAAEGVDTCFANPGTTELDLVRALEPLDGIRCVVGLQENICTGAADG 60 Query: 93 YGRMLGRPASTLLHLGPGFANGIANLHNARRARTPIVNIIGDHTSWHLPYDAPLTSDIES 152 YGRMLGRPA+TLLHLGPGFANGIANLHNARRA TPIVN+IGDHTSWHLPYDAPLTSDIES Sbjct: 61 YGRMLGRPAATLLHLGPGFANGIANLHNARRAHTPIVNVIGDHTSWHLPYDAPLTSDIES 120 Query: 153 LARPVSGWVHRITGTDDIVSAAADSVRQSTAAGGQGSTLIFPADFQFADIAESHAVAAVE 212 LARPVSGWV RI G + A A++VR+S A GGQG+TLIFPADFQ A + + AVA V Sbjct: 121 LARPVSGWVRRIGGVQECAQAGAEAVRESLAQGGQGATLIFPADFQAAALPD--AVAGVP 178 Query: 213 EST------EPAED-----YQPAQALARLREAKRVVFLLGGGGEESGLGARAQRAVARIA 261 ST PAE+ Y PA AL RLR RVVFLLGGGGE SGLGARAQRA AR+ Sbjct: 179 ASTPSPAPSRPAEEGAPDGYDPALALERLRTVGRVVFLLGGGGEHSGLGARAQRAAARLC 238 Query: 262 AHTGCSVYAETFPARAERGQGLPSFDRLPYFPEPARKVLDEADLVVLVGALPPITYFGYV 321 G S YAETFPAR+ERGQGLP+FDRLPYFPEPAR VLD ADLVVL GALPPITYFGY Sbjct: 239 GQLGASAYAETFPARSERGQGLPAFDRLPYFPEPARAVLDAADLVVLAGALPPITYFGYA 298 Query: 322 GHPSALVAPERLLTISLPGRPAAARVEQLADALGAPPYAVPQHALPALPEGELNPQKIAA 381 GHPSALV ERLL ++ PG A R+EQLADALGAP Y P +PA+PEGEL P +IAA Sbjct: 299 GHPSALVPAERLLVLAAPGHAVAERLEQLADALGAPAYEAPAAEMPAMPEGELTPARIAA 358 Query: 382 VLARELPEHAIVSVEGGTCGYPFYAVSDAARPHTVLTNTGGAIGQGLPVALGAAVACPDR 441 VLARELPE AIVSVEGGTCGYPFYA S AARPHT LTNTGGAIGQGLPVALGAA+ACPDR Sbjct: 359 VLARELPERAIVSVEGGTCGYPFYAASAAARPHTTLTNTGGAIGQGLPVALGAAIACPDR 418 Query: 442 TVVGLLSDGSTQYTIQTLWSLAHENARVVVLIAANHQYAILRNELRRDGAPLGERAAQMT 501 VVGLLSDGSTQYT+Q LWSLAHE VVVLIAANHQYAILRNELRRDG LG RA +T Sbjct: 419 PVVGLLSDGSTQYTVQALWSLAHEQLDVVVLIAANHQYAILRNELRRDGGVLGARAEALT 478 Query: 502 ALDHPRIDWVALAQSYGVPASRAETAQQLQQQLQAAFAGSGPALIEMAL 550 ALDHPRIDWV LAQSYGVPA+R TAQ L +L+ AF GPALIEMAL Sbjct: 479 ALDHPRIDWVGLAQSYGVPAARVSTAQALAGELRRAFGRKGPALIEMAL 527 >ref|XP_002945177.1| PREDICTED: benzoylformate decarboxylase-like [Xenopus (Silurana) tropicalis] Length = 498 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 367/497 (73%), Positives = 404/497 (81%), Gaps = 1/497 (0%) Query: 33 MTRYTGAHALWAGLLDQGVDTCFANPGTTELDLVRGLESFPRLRCVVALQENVCTGAADG 92 MT+ TGA ALWA L +GVD CFANPGTTELDLVRGLE+ +RCVV LQENVCTG ADG Sbjct: 1 MTQMTGAQALWAALAGEGVDACFANPGTTELDLVRGLEARDEIRCVVGLQENVCTGGADG 60 Query: 93 YGRMLGRPASTLLHLGPGFANGIANLHNARRARTPIVNIIGDHTSWHLPYDAPLTSDIES 152 YGRMLGRPA+TLLHLGPGFANGIANLHNARRARTPI+N+IGDHTSWHLPYDAP TSDIES Sbjct: 61 YGRMLGRPAATLLHLGPGFANGIANLHNARRARTPIINVIGDHTSWHLPYDAPRTSDIES 120 Query: 153 LARPVSGWVHRITGTDDIVSAAADSVRQSTAAGGQGSTLIFPADFQFADIAESHAVAAVE 212 LA+PVSGWVHRI T D+ AA +SVRQS A GG+G+TLIFPADFQ +A A +V Sbjct: 121 LAKPVSGWVHRIESTQDVAFAALESVRQSGAEGGRGATLIFPADFQAEQVAPGSAPLSVA 180 Query: 213 ESTEPAED-YQPAQALARLREAKRVVFLLGGGGEESGLGARAQRAVARIAAHTGCSVYAE 271 + + A ++ARLR +R+VFLLGGGG SGLG RAQRA AR+ A G +AE Sbjct: 181 ATAGSTGAAFDVAASVARLRAGRRIVFLLGGGGALSGLGVRAQRATARLCAALGAQAFAE 240 Query: 272 TFPARAERGQGLPSFDRLPYFPEPARKVLDEADLVVLVGALPPITYFGYVGHPSALVAPE 331 TFP+R+ERGQGLP+FDRLPYFPEPAR VLD ADLVVL GALPP+TYFGY GHPSALV Sbjct: 241 TFPSRSERGQGLPAFDRLPYFPEPARAVLDPADLVVLAGALPPVTYFGYAGHPSALVDAG 300 Query: 332 RLLTISLPGRPAAARVEQLADALGAPPYAVPQHALPALPEGELNPQKIAAVLARELPEHA 391 RLL I+ PGR A R+EQLADALGAP + P H LP P G L P KIAAVLARELPE A Sbjct: 301 RLLVIAEPGRAVAERLEQLADALGAPAFEAPAHPLPEQPTGALAPGKIAAVLARELPERA 360 Query: 392 IVSVEGGTCGYPFYAVSDAARPHTVLTNTGGAIGQGLPVALGAAVACPDRTVVGLLSDGS 451 IVSVEGGTCGYPFYA S AA+ HT LTNTGGAIGQGLPVA GAA+ACPDR VVGLLSDGS Sbjct: 361 IVSVEGGTCGYPFYAASAAAKVHTTLTNTGGAIGQGLPVAFGAAIACPDRRVVGLLSDGS 420 Query: 452 TQYTIQTLWSLAHENARVVVLIAANHQYAILRNELRRDGAPLGERAAQMTALDHPRIDWV 511 TQYTIQTLWSLAHE VVVLIAANHQYAILRNELRRDGA LG RA +T+L P IDWV Sbjct: 421 TQYTIQTLWSLAHEKLDVVVLIAANHQYAILRNELRRDGATLGARAEALTSLAAPCIDWV 480 Query: 512 ALAQSYGVPASRAETAQ 528 LA+SYGVPA+RA+TA+ Sbjct: 481 GLAESYGVPATRAQTAE 497 >ref|YP_003979081.1| thiamine pyrophosphate enzyme, C-terminal TPP binding domain-containing protein 3 [Achromobacter xylosoxidans A8] gb|ADP16366.1| thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein 3 [Achromobacter xylosoxidans A8] Length = 515 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 353/514 (68%), Positives = 392/514 (76%) Query: 37 TGAHALWAGLLDQGVDTCFANPGTTELDLVRGLESFPRLRCVVALQENVCTGAADGYGRM 96 +GA L L QGV+ CFANPGTTELDLVR +E P +RCVV LQENVCTGAADGYGR+ Sbjct: 2 SGASVLLEALRKQGVEVCFANPGTTELDLVRAMEEVPGMRCVVGLQENVCTGAADGYGRL 61 Query: 97 LGRPASTLLHLGPGFANGIANLHNARRARTPIVNIIGDHTSWHLPYDAPLTSDIESLARP 156 G+PA+TLLHLGPGFANGIANLHNARRARTPIVNIIGDH SWHL DAPLTSDIESLARP Sbjct: 62 TGKPAATLLHLGPGFANGIANLHNARRARTPIVNIIGDHASWHLECDAPLTSDIESLARP 121 Query: 157 VSGWVHRITGTDDIVSAAADSVRQSTAAGGQGSTLIFPADFQFADIAESHAVAAVEESTE 216 VSGWV RI D AA +VR S A GGQG+TLIFPADFQ + + A AA + Sbjct: 122 VSGWVQRIASAQDAAGAARAAVRASLADGGQGATLIFPADFQAESVTDESADAAADGVAT 181 Query: 217 PAEDYQPAQALARLREAKRVVFLLGGGGEESGLGARAQRAVARIAAHTGCSVYAETFPAR 276 + A A RL A++ +FLLGGGG SGLG RAQ A AR+ A G YAETFPAR Sbjct: 182 EPVAFDAAAAWQRLSRAQKPLFLLGGGGPASGLGRRAQIAAARLCAALGGKAYAETFPAR 241 Query: 277 AERGQGLPSFDRLPYFPEPARKVLDEADLVVLVGALPPITYFGYVGHPSALVAPERLLTI 336 +ERG+GLP FDRLPYFPEPAR LD ADLVVLVGALPP+TYFGY GHPS LV ERLL + Sbjct: 242 SERGRGLPDFDRLPYFPEPARAALDAADLVVLVGALPPVTYFGYAGHPSRLVPAERLLEL 301 Query: 337 SLPGRPAAARVEQLADALGAPPYAVPQHALPALPEGELNPQKIAAVLARELPEHAIVSVE 396 + PG+ AA+R+E LA+ GAP + LP G L PQ IAAV+AR LP+ AIVSVE Sbjct: 302 AAPGQDAASRLEALAELAGAPAFEPAAAMLPEPVPGVLTPQSIAAVVARALPDDAIVSVE 361 Query: 397 GGTCGYPFYAVSDAARPHTVLTNTGGAIGQGLPVALGAAVACPDRTVVGLLSDGSTQYTI 456 GGTCGYP YA S A PHTVLTNTGGAIGQGLPVA+GAA+ACP R VV +LSDGSTQYTI Sbjct: 362 GGTCGYPLYAASAGAAPHTVLTNTGGAIGQGLPVAMGAAIACPQRRVVAVLSDGSTQYTI 421 Query: 457 QTLWSLAHENARVVVLIAANHQYAILRNELRRDGAPLGERAAQMTALDHPRIDWVALAQS 516 QTLWSLAHEN V VLIAANHQYAILRNELRR A LGERAA++T+LD PRIDWV LA S Sbjct: 422 QTLWSLAHENLPVTVLIAANHQYAILRNELRRGNAVLGERAAELTSLDRPRIDWVGLASS 481 Query: 517 YGVPASRAETAQQLQQQLQAAFAGSGPALIEMAL 550 YGV ASRA T+++L QL +A GP LIEMAL Sbjct: 482 YGVQASRAATSEELAAQLASALRQPGPVLIEMAL 515 >ref|YP_004353626.1| acetolactate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA68622.1| putative acetolactate synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 513 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 267/516 (51%), Positives = 323/516 (62%), Gaps = 8/516 (1%) Query: 38 GAHALWAGLLDQGVDTCFANPGTTELDLVRGLESFPRLRCVVALQENVCTGAADGYGRML 97 GA + + G++ CFANPGTTE+ LV + S P L+ V++L E VCTGAADGYGR+ Sbjct: 3 GAQLIVKAAVASGIEYCFANPGTTEIPLVAAMASAPALKPVLSLFEGVCTGAADGYGRIA 62 Query: 98 GRPASTLLHLGPGFANGIANLHNARRARTPIVNIIGDHTSWHLPYDAPLTSDIESLARPV 157 G+PA TL HLGPGFANGIANLHNARRA TPIVN+IGDH SWH+ YD PL SDI++LA V Sbjct: 63 GKPAMTLTHLGPGFANGIANLHNARRANTPIVNVIGDHASWHINYDPPLASDIQALAGSV 122 Query: 158 SGWVHRITGTDDIVSAAADSVRQSTAAGGQGSTLIFPADFQFADIAESHAVAAVEESTEP 217 SGWV + ++VR + A GQ ++LI P D Q + A ++ Sbjct: 123 SGWVRTSRTASGVGEDFQEAVRAAWQANGQIASLILPMDLQANTVQHEKAFTTLQAPVRR 182 Query: 218 AEDYQPAQALARLREAKRVVFLLGGGGEESGLGARAQRAVARIAAHTGCSVYAETFPARA 277 + LR+ +R+VF++G + GL A R+A G ++AETFP + Sbjct: 183 FAGDRIEAVAQALRDGQRLVFIVG----DQGLSVAGLEAAGRLAQLPGVRLFAETFPRLS 238 Query: 278 ERGQGLPSFDRLPYFPEPARKVLDEADLVVLVGALPPITYFGYVGHPSALVAPERLLTIS 337 RG GLP DRLPYFPE A ++LD+ D VV G PI+YFGY G S L ERLL ++ Sbjct: 239 YRGGGLPDLDRLPYFPEVAIEILDQYDAVVCAGVPDPISYFGYEGIASRLAERERLLCLA 298 Query: 338 LPGRPAAARVEQLADALGAPPYAVPQHALPALP--EGELNPQKIAAVLARELPEHAIVSV 395 G A + LADAL AP Y VP LP E L PQ + VLA LP+ IVSV Sbjct: 299 EVGDDVAGALTALADALEAPAY-VPTPTGIELPPSEATLTPQSVGQVLAASLPDDCIVSV 357 Query: 396 EGGTCGYPFYAVSDAARPHTVLTNTGGAIGQGLPVALGAAVACPDRTVVGLLSDGSTQYT 455 EGGTCGYPF+ S A H VLTNTGGAIGQG+PV GAA+A V L SDGS QYT Sbjct: 358 EGGTCGYPFFTASAHAARHRVLTNTGGAIGQGIPVGFGAAMAERGNRVFCLQSDGSAQYT 417 Query: 456 IQTLWSLAHENARVVVLIAANHQYAILRNELRRDG-APLGERAAQMTALDHPRIDWVALA 514 IQTLWS+A E VV+LIAANH+YAIL+NELRR G LG A +T LD PRIDW ALA Sbjct: 418 IQTLWSIAREQLPVVILIAANHRYAILQNELRRFGMTELGPEALSLTVLDRPRIDWKALA 477 Query: 515 QSYGVPASRAETAQQLQQQLQAAFAGSGPALIEMAL 550 + YG+PAS T +LQ+ L A A GP LIEMAL Sbjct: 478 KGYGLPASTVHTNGELQRALANAKADGGPCLIEMAL 513