BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5104.p (200 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777326.1| hypothetical protein Hsero_3947 [Herbaspiril... 390 e-107 ref|NP_883005.1| hypothetical protein BPP0664 [Bordetella parape... 353 1e-95 ref|YP_004234194.1| hypothetical protein Acav_1709 [Acidovorax a... 337 4e-91 ref|XP_002945175.1| PREDICTED: hypothetical protein LOC100486318... 333 1e-89 ref|YP_004360126.1| hypothetical protein bgla_1g15110 [Burkholde... 295 3e-78 >ref|YP_003777326.1| hypothetical protein Hsero_3947 [Herbaspirillum seropedicae SmR1] gb|ADJ65418.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 200 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 190/200 (95%), Positives = 196/200 (98%) Query: 1 MKTPNFENFHIRKWYLQIEDSLAGESGKDADGAPLRKIVIAACLHNPFAGKYVEDLSSWI 60 MK+PNF NFHIRKW+LQIED+LAGESGK+ADGAPLRKIVIAACLHNPFAGKYVEDLSSWI Sbjct: 1 MKSPNFANFHIRKWFLQIEDTLAGESGKEADGAPLRKIVIAACLHNPFAGKYVEDLSSWI 60 Query: 61 NPSPLLGQEFARCIREAAQGQAIESYGKACLVGVDGEYEHGNALLTNPAANPVRDGVGGA 120 PSPLLGQEFAR IREAAQGQAIESYGKACLVGVDGEYEHGNALLTNPAANPVR+GVGGA Sbjct: 61 EPSPLLGQEFARRIREAAQGQAIESYGKACLVGVDGEYEHGNALLTNPAANPVREGVGGA 120 Query: 121 KSWVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDGPNRDEVVVIWAFATRGR 180 KSWVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDGPNRDEVV+IWAFATRGR Sbjct: 121 KSWVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDGPNRDEVVLIWAFATRGR 180 Query: 181 LNARLGGLKACEVKGQDGLV 200 LNARLGGLKA EVKGQDGLV Sbjct: 181 LNARLGGLKASEVKGQDGLV 200 >ref|NP_883005.1| hypothetical protein BPP0664 [Bordetella parapertussis 12822] ref|NP_887221.1| hypothetical protein BB0671 [Bordetella bronchiseptica RB50] emb|CAE40073.1| conserved hypothetical protein [Bordetella parapertussis] emb|CAE31171.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 200 Score = 353 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 169/199 (84%), Positives = 183/199 (91%) Query: 1 MKTPNFENFHIRKWYLQIEDSLAGESGKDADGAPLRKIVIAACLHNPFAGKYVEDLSSWI 60 MKTPNF +HIRKWYLQ+ED+LAGE+G ADG PLRKIV+AAC+HNP+AGKYVEDL+ WI Sbjct: 1 MKTPNFSVYHIRKWYLQVEDTLAGETGAPADGEPLRKIVLAACIHNPYAGKYVEDLTLWI 60 Query: 61 NPSPLLGQEFARCIREAAQGQAIESYGKACLVGVDGEYEHGNALLTNPAANPVRDGVGGA 120 + SP LG EF R +REAAQGQAI SYGKACLVG DGEYEHGNALLTNPAANPVRD +GGA Sbjct: 61 DASPGLGAEFGRRVREAAQGQAIASYGKACLVGADGEYEHGNALLTNPAANPVRDALGGA 120 Query: 121 KSWVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDGPNRDEVVVIWAFATRGR 180 KSWVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDGPNRDEVV+IWAFATRGR Sbjct: 121 KSWVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDGPNRDEVVLIWAFATRGR 180 Query: 181 LNARLGGLKACEVKGQDGL 199 LNARLGGL AC+V+G DGL Sbjct: 181 LNARLGGLAACDVQGHDGL 199 >ref|YP_004234194.1| hypothetical protein Acav_1709 [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX45627.1| protein of unknown function DUF1185 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 201 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 163/199 (81%), Positives = 180/199 (90%) Query: 2 KTPNFENFHIRKWYLQIEDSLAGESGKDADGAPLRKIVIAACLHNPFAGKYVEDLSSWIN 61 K NF FHIRKWYLQIED+LAGE+G ADG PLRKIVIAACLHNPFAG+Y DLSSWI+ Sbjct: 3 KAANFSVFHIRKWYLQIEDTLAGETGAPADGEPLRKIVIAACLHNPFAGRYEPDLSSWID 62 Query: 62 PSPLLGQEFARCIREAAQGQAIESYGKACLVGVDGEYEHGNALLTNPAANPVRDGVGGAK 121 PSP LG+EF R I+EAA G+AIESYGKA +VG+DGEYEHGNALLTNPAANP+RD +GG K Sbjct: 63 PSPELGREFGRRIQEAAAGRAIESYGKAIVVGIDGEYEHGNALLTNPAANPIRDAIGGGK 122 Query: 122 SWVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDGPNRDEVVVIWAFATRGRL 181 SWVPS+GKRGGPGT IDIPLAHKDALYVRSHYDTV+AQF DGPNRDEVV+IWAFATRGRL Sbjct: 123 SWVPSSGKRGGPGTSIDIPLAHKDALYVRSHYDTVTAQFADGPNRDEVVLIWAFATRGRL 182 Query: 182 NARLGGLKACEVKGQDGLV 200 NARLGGLKA E++G+DGLV Sbjct: 183 NARLGGLKASEIQGRDGLV 201 >ref|XP_002945175.1| PREDICTED: hypothetical protein LOC100486318 [Xenopus (Silurana) tropicalis] Length = 201 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 156/197 (79%), Positives = 179/197 (90%) Query: 3 TPNFENFHIRKWYLQIEDSLAGESGKDADGAPLRKIVIAACLHNPFAGKYVEDLSSWINP 62 + NF FHIRKWYLQIED+L+GE+G ADG PLRKIVIAA +HNPFAG++V+DLSSW+ P Sbjct: 4 SANFSVFHIRKWYLQIEDTLSGETGAPADGEPLRKIVIAAAIHNPFAGRFVQDLSSWVEP 63 Query: 63 SPLLGQEFARCIREAAQGQAIESYGKACLVGVDGEYEHGNALLTNPAANPVRDGVGGAKS 122 SP LG+EF R I+ AAQG+ IESYGKACLVG+DGEYEHGNALLTNPAANP+RD +GGAKS Sbjct: 64 SPELGKEFGRRIQAAAQGRTIESYGKACLVGIDGEYEHGNALLTNPAANPIRDALGGAKS 123 Query: 123 WVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDGPNRDEVVVIWAFATRGRLN 182 WVPSTGKRGGPGT+ID+PLAH++ALYVRSHYDTV+A F D PNRDEV+VIWAFATRGRLN Sbjct: 124 WVPSTGKRGGPGTVIDVPLAHRNALYVRSHYDTVTALFPDAPNRDEVLVIWAFATRGRLN 183 Query: 183 ARLGGLKACEVKGQDGL 199 ARLGGLKA +VKG+DGL Sbjct: 184 ARLGGLKAADVKGEDGL 200 >ref|YP_004360126.1| hypothetical protein bgla_1g15110 [Burkholderia gladioli BSR3] gb|AEA60170.1| hypothetical protein bgla_1g15110 [Burkholderia gladioli BSR3] Length = 201 Score = 295 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 142/199 (71%), Positives = 163/199 (81%) Query: 2 KTPNFENFHIRKWYLQIEDSLAGESGKDADGAPLRKIVIAACLHNPFAGKYVEDLSSWIN 61 K PNFE +HIRKWY QIEDSLA ESG+ ADG PLRKIVIAA LHNP+AG + +L + + Sbjct: 3 KQPNFETYHIRKWYTQIEDSLANESGELADGEPLRKIVIAAALHNPYAGSFSHNLDALVE 62 Query: 62 PSPLLGQEFARCIREAAQGQAIESYGKACLVGVDGEYEHGNALLTNPAANPVRDGVGGAK 121 PSP LG EFAR IRE A GQ+IESYGKACLVG GEYEHGNA LT+ A P+R+ +GG K Sbjct: 63 PSPKLGIEFARRIRELAAGQSIESYGKACLVGSAGEYEHGNAFLTSIFAEPIREALGGGK 122 Query: 122 SWVPSTGKRGGPGTIIDIPLAHKDALYVRSHYDTVSAQFNDGPNRDEVVVIWAFATRGRL 181 SWVPS+GKRG T+ID+PLAHKDALYVRSHYDT+S F D PN DEV+VI+AFATRGRL Sbjct: 123 SWVPSSGKRGPLNTVIDVPLAHKDALYVRSHYDTMSCLFADAPNADEVLVIFAFATRGRL 182 Query: 182 NARLGGLKACEVKGQDGLV 200 +ARLGGLK+ E+KG DGLV Sbjct: 183 HARLGGLKSSEIKGLDGLV 201