BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5090.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777315.1| cytochrome b561 protein [Herbaspirillum sero... 336 2e-90 ref|YP_004232714.1| putative cytochrome b561 [Acidovorax avenae ... 214 8e-54 ref|YP_004234205.1| cytochrome b/b6 domain-containing protein [A... 202 3e-50 ref|YP_001239852.1| putative cytochrome b561 [Bradyrhizobium sp.... 201 8e-50 gb|EGH77696.1| putative cytochrome b561 [Pseudomonas syringae pv... 193 1e-47 >ref|YP_003777315.1| cytochrome b561 protein [Herbaspirillum seropedicae SmR1] gb|ADJ65407.1| cytochrome b561 protein [Herbaspirillum seropedicae SmR1] Length = 214 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 187/214 (87%), Positives = 203/214 (94%), Gaps = 1/214 (0%) Query: 1 MLKNSAERFGAVAKCFHWTMAAAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGELVIP 60 MLKN+AERFG++AK FHW+MA AFILAYIVVYYVIWFIDPETSIKPALFGIEPNG LVIP Sbjct: 1 MLKNTAERFGSIAKLFHWSMAVAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGALVIP 60 Query: 61 ILNIHWVLGVSIGVLVIPRLIWRWINVEPSPVPGSALEHLLAKLAHWALYLFMILMPLTG 120 +LNIHWVLGVSIGVLV+PRL+WR INVEP+PVPGSALEHLLA+LAHWALYLFMI+MPLTG Sbjct: 61 LLNIHWVLGVSIGVLVVPRLVWRLINVEPAPVPGSALEHLLARLAHWALYLFMIVMPLTG 120 Query: 121 YLNTYDPTNFGLFIIPAFRETALFHWIATTWQLTAEQVETPIFAIHKFLGDWVVWVVVLL 180 YLNTYDPTNFGLFIIPAFRETALF WIA TWQLTAEQVETPIFA+HKFLGDWVVWVVV L Sbjct: 121 YLNTYDPTNFGLFIIPAFRETALFAWIANTWQLTAEQVETPIFAVHKFLGDWVVWVVVAL 180 Query: 181 HIAAALFHHRVRKDATLVRMLPASWGGKDEGERR 214 H+AAA FHHRVRKDATL RMLPA+WGG+ G++R Sbjct: 181 HVAAATFHHRVRKDATLTRMLPAAWGGQ-AGQKR 213 >ref|YP_004232714.1| putative cytochrome b561 [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX44147.1| putative cytochrome b561 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 193 Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 113/200 (56%), Positives = 142/200 (71%), Gaps = 13/200 (6%) Query: 4 NSAERFGAVAKCFHWTMAAAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGELVIPILN 63 N+A RFGA+AK FHWT AAAFI AY+VVYYVIWF+D + + +P+LN Sbjct: 5 NTATRFGALAKFFHWTSAAAFIGAYVVVYYVIWFMDDTS-------------DASLPVLN 51 Query: 64 IHWVLGVSIGVLVIPRLIWRWINVEPSPVPGSALEHLLAKLAHWALYLFMILMPLTGYLN 123 IHWVLG+ +G LV+PRL+WR ++V+P PG+ LEH LA AHW LY ++ MPLTGY+ Sbjct: 52 IHWVLGLIVGFLVLPRLLWRLLDVQPEDPPGAPLEHALAHAAHWGLYGLLVAMPLTGYIG 111 Query: 124 TYDPTNFGLFIIPAFRETALFHWIATTWQLTAEQVETPIFAIHKFLGDWVVWVVVLLHIA 183 T PT+FGLF + F ETALF WI+ T+Q+ E E P+ A+H FLG +V WVVVLLH+ Sbjct: 112 TGAPTDFGLFTVTGFNETALFAWISRTFQVGWEAFEAPVDAVHHFLGQFVAWVVVLLHVG 171 Query: 184 AALFHHRVRKDATLVRMLPA 203 AALFHHRVR+D L RMLP Sbjct: 172 AALFHHRVRRDDVLTRMLPG 191 >ref|YP_004234205.1| cytochrome b/b6 domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX45638.1| Cytochrome b/b6 domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 223 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 109/192 (56%), Positives = 140/192 (72%) Query: 3 KNSAERFGAVAKCFHWTMAAAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGELVIPIL 62 +N+ + +G+V+ FHW MAAAFI AY V YYVIW +DPETS++P LFG P+ + V+PIL Sbjct: 4 RNTLDAYGSVSMLFHWAMAAAFIAAYGVAYYVIWVVDPETSVRPPLFGWAPDAQRVVPIL 63 Query: 63 NIHWVLGVSIGVLVIPRLIWRWINVEPSPVPGSALEHLLAKLAHWALYLFMILMPLTGYL 122 NIHWVLG++IG LV+PRL+WR P P S LE L A AHWALY +ILMP++GY+ Sbjct: 64 NIHWVLGMTIGFLVLPRLLWRIFGTTPRHAPASRLEVLAADAAHWALYALLILMPVSGYM 123 Query: 123 NTYDPTNFGLFIIPAFRETALFHWIATTWQLTAEQVETPIFAIHKFLGDWVVWVVVLLHI 182 TYDPTNFGLF+IPA R+TA WI + + LT Q+E ++ +H FLG V WV+V LHI Sbjct: 124 TTYDPTNFGLFVIPACRDTAFAEWIRSLFGLTTLQLEDAMWTVHSFLGKRVAWVLVALHI 183 Query: 183 AAALFHHRVRKD 194 AAL HH +R+D Sbjct: 184 GAALMHHFIRRD 195 >ref|YP_001239852.1| putative cytochrome b561 [Bradyrhizobium sp. BTAi1] gb|ABQ35946.1| putative cytochrome b561 [Bradyrhizobium sp. BTAi1] Length = 195 Score = 201 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 107/200 (53%), Positives = 140/200 (70%), Gaps = 13/200 (6%) Query: 4 NSAERFGAVAKCFHWTMAAAFILAYIVVYYVIWFIDPETSIKPALFGIEPNGELVIPILN 63 N+ FGA+AK FHW+ AAAFI+AY VVYYVIWF+D + P +P+LN Sbjct: 5 NTKREFGALAKFFHWSSAAAFIVAYAVVYYVIWFMD---DMAPE----------ALPVLN 51 Query: 64 IHWVLGVSIGVLVIPRLIWRWINVEPSPVPGSALEHLLAKLAHWALYLFMILMPLTGYLN 123 IHWVLG+ +G LV+PRL+WR+ NV+P P GS +EH+LA +AH LY +I+MPLTGY+ Sbjct: 52 IHWVLGIIVGFLVLPRLLWRFANVQPDPPHGSRVEHVLAHVAHGGLYALLIVMPLTGYIG 111 Query: 124 TYDPTNFGLFIIPAFRETALFHWIATTWQLTAEQVETPIFAIHKFLGDWVVWVVVLLHIA 183 T T+FGLF +P+FRETA+F WI + + ++ E P+ AIH F+G W+ W VV LH+A Sbjct: 112 TDAATDFGLFKVPSFRETAVFGWIESGLGIDWDRFEPPVDAIHHFVGKWIAWTVVALHVA 171 Query: 184 AALFHHRVRKDATLVRMLPA 203 AALFHH VR+D L RMLP Sbjct: 172 AALFHHLVRRDNVLTRMLPG 191 >gb|EGH77696.1| putative cytochrome b561 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 198 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 115/205 (56%), Positives = 141/205 (68%), Gaps = 19/205 (9%) Query: 3 KNSAERFGAVAKCFHWTMAAAFILAYIVVYYVIWFID---PETSIKPALFGIEPNGELVI 59 +NSA FG +AK FHWT AA+FI AYIVVYYVIWF+D PE+ + Sbjct: 4 RNSATCFGGLAKFFHWTSAASFIAAYIVVYYVIWFMDDTSPES----------------L 47 Query: 60 PILNIHWVLGVSIGVLVIPRLIWRWINVEPSPVPGSALEHLLAKLAHWALYLFMILMPLT 119 P+LNIHWVLG+ +G LV+PRL+WR ++++P PGSALEH+LA +AH LY MI MPLT Sbjct: 48 PVLNIHWVLGLLVGFLVLPRLLWRLLDMQPDNPPGSALEHILAHVAHGGLYGLMIAMPLT 107 Query: 120 GYLNTYDPTNFGLFIIPAFRETALFHWIATTWQLTAEQVETPIFAIHKFLGDWVVWVVVL 179 GYL T PT+FGLF + F ET LF W + T+ L+ E E PI +H FLG WV WVVV Sbjct: 108 GYLGTGAPTDFGLFSVTGFNETKLFAWFSVTFSLSYEAFEAPIDTVHHFLGKWVAWVVVS 167 Query: 180 LHIAAALFHHRVRKDATLVRMLPAS 204 LH+ AALFHH VR+D+ L RMLP S Sbjct: 168 LHVLAALFHHLVRRDSVLRRMLPWS 192