BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5077.p (486 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777301.1| SPFH domain-containing protein [Herbaspirill... 700 0.0 ref|ZP_05624867.1| SPFH domain / Band 7 family protein [Campylob... 371 e-100 ref|ZP_04753898.1| SPFH domain-containing protein [Actinobacillu... 369 e-100 ref|ZP_07805096.1| spfh domain / band 7 family protein [Helicoba... 362 8e-98 ref|YP_001407965.1| SPFH domain-containing protein [Campylobacte... 356 6e-96 >ref|YP_003777301.1| SPFH domain-containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ65393.1| SPFH domain-containing protein [Herbaspirillum seropedicae SmR1] Length = 489 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 435/444 (97%), Positives = 440/444 (99%) Query: 24 ITLRRVVPTNMVHIVQTSHSSTPYGRGKPAGNAYYAWPSWVPKLGITVTEFPESIFQVAL 83 +TLRRVVPTNMVHIVQTSHSSTPYGRGKPAGN YYAWPSWVPKLGITVTEFPESIFQVAL Sbjct: 27 VTLRRVVPTNMVHIVQTSHSSTPYGRGKPAGNTYYAWPSWVPKLGITVTEFPESIFQVAL 86 Query: 84 NNYEAYDKERLPFVIDAVAFFRVDNAETAAQRVATFDALHTDLKAVLQGAVRRVLATNAL 143 NNYEAYDKERLPFVIDAVAFFRVDNAETAAQRVATFDALHTDLKAVLQGAVRRVLATNAL Sbjct: 87 NNYEAYDKERLPFVIDAVAFFRVDNAETAAQRVATFDALHTDLKAVLQGAVRRVLATNAL 146 Query: 144 EDIMQSRAELGAQFTMEVQEQISQWGVLPVKTIEFMDLRDANGSTVINNVMAKEKSRIEM 203 EDIMQSRAELGAQFT EVQEQISQWGVLPVKTIEFMDLRDANGS VINNVMAKEKSRI+M Sbjct: 147 EDIMQSRAELGAQFTAEVQEQISQWGVLPVKTIEFMDLRDANGSNVINNVMAKEKSRIDM 206 Query: 204 ESRVKVAENQRQAELAEIDAKRTVEVQRQDAAQQVGLRTAEKEKQVGIANEQAQQEIKAA 263 ESRVKVAENQRQAELAEIDAKRTVEVQRQDAAQQ+GLRTAEKEKQVGIANEQAQQEIKAA Sbjct: 207 ESRVKVAENQRQAELAEIDAKRTVEVQRQDAAQQIGLRTAEKEKQVGIANEQAQQEIKAA 266 Query: 264 AKTTTERDMDVKKVQEVRGAEIARDVAAVRAEQEKQVAVVNADAQKQVQVINADAQKQAV 323 AKTTTERDMDVKKVQEVRGAEIARDVAAVRAEQEKQVAVVNADAQKQVQVINADAQKQAV Sbjct: 267 AKTTTERDMDVKKVQEVRGAEIARDVAAVRAEQEKQVAVVNADAQKQVQVINADAQKQAV 326 Query: 324 TTRAEGDLAAALKEADGVRARGEAAAAAEQAMLMAPVTTQIQLAKEIGANAGYQQYLITI 383 TT+AEGDLAAALKEADG+RARGEAAAAAEQAMLMAPVTTQIQLAKEIGANAGYQQYLITI Sbjct: 327 TTKAEGDLAAALKEADGIRARGEAAAAAEQAMLMAPVTTQIQLAKEIGANAGYQQYLITI 386 Query: 384 KQVEVGRDVGLEMARAMQHADLKVIANAGDMQQGVAKLGDLFTPAGGTKLTGMLAALSQT 443 KQVEVGRDVGLEMARAMQHADLKVIANAGDMQQGVA LGDLFTPAGGTKLTGMLAALSQT Sbjct: 387 KQVEVGRDVGLEMARAMQHADLKVIANAGDMQQGVASLGDLFTPAGGTKLTGMLAALSQT 446 Query: 444 PEGRQFLDHVTPLLAKGATTGALV 467 PEGRQFLDHVTPLLAKGATTGALV Sbjct: 447 PEGRQFLDHVTPLLAKGATTGALV 470 >ref|ZP_05624867.1| SPFH domain / Band 7 family protein [Campylobacter gracilis RM3268] gb|EEV18317.1| SPFH domain / Band 7 family protein [Campylobacter gracilis RM3268] Length = 474 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 213/456 (46%), Positives = 314/456 (68%), Gaps = 11/456 (2%) Query: 10 AAVAAILLLVLIIAITLRRVVPTNMVHIVQTSHSSTPYGRGKPAGNAYYAWPSWVPKLGI 69 AAV +++L +I+ + RR+V TN VHIVQ++ +T YG+ GN+YY +PSWVP LG+ Sbjct: 10 AAVGVLIVLFIIVPLFFRRIVETNEVHIVQSARKTTSYGKDTGNGNSYYEFPSWVPVLGV 69 Query: 70 TVTEFPESIFQVALNNYEAYDKERLPFVIDAVAFFRVDNAETAAQRVATFDALHTDLKAV 129 T P S+F + + +YEAYD RLPFV+D AFFR+ ++ AAQRV F+ L+ L+ + Sbjct: 70 TKIVLPVSVFSIKIEDYEAYDLGRLPFVVDITAFFRIMDSNLAAQRVNNFEDLNNQLRNI 129 Query: 130 LQGAVRRVLATNALEDIMQSRAELGAQFTMEVQEQISQWGVLPVKTIEFMDLRDANGSTV 189 +QG++R +L++ LEDI+Q R+ELG FT V+ Q+ WG+ PVK IE MD+RD++GS V Sbjct: 130 IQGSIRSILSSRVLEDILQIRSELGDDFTKAVKTQLQNWGIEPVKNIELMDIRDSSGSKV 189 Query: 190 INNVMAKEKSRIEMESRVKVAENQRQAELAEIDAKRTVEVQRQDAAQQVGLRTAEKEKQV 249 I N+M K+KS+IE ESRV+VA N + A++AEI+A + EV++Q+A + VGL+T E E++V Sbjct: 190 ILNIMEKKKSQIEKESRVEVANNTKLAQIAEIEAAQATEVRQQEANKMVGLKTVENEREV 249 Query: 250 GIANEQAQQEIKAAAKTTTERDMDVKKVQEVRGAEIARDVAAVRAEQEKQVAVVNADAQK 309 I+ EQA+Q IK K T E+ M+V +V +V+ AEI + V V+AEQE++ ++A+A+K Sbjct: 250 AISKEQAEQLIKDQQKITQEKAMEVVRVNDVKQAEIKKQVEIVKAEQEQRKIEIDAEARK 309 Query: 310 QVQVINADAQKQAVTTRAEGD-----LAAAL------KEADGVRARGEAAAAAEQAMLMA 358 ++ +A+A K+ A+GD LAAA KEA G G A A A + +A Sbjct: 310 NAKIRDAEAIKENQILVAQGDKEKQFLAAAALLEMKDKEAQGTLKIGSAEAEALRLKELA 369 Query: 359 PVTTQIQLAKEIGANAGYQQYLITIKQVEVGRDVGLEMARAMQHADLKVIANAGDMQQGV 418 PV QI+LA+EIG N GYQ YLI+IKQ+E RD+GLE A+A+ ADLK+IAN G + +G+ Sbjct: 370 PVNAQIELAREIGENQGYQTYLISIKQIEANRDIGLEQAKALSAADLKIIANEGSVGEGM 429 Query: 419 AKLGDLFTPAGGTKLTGMLAALSQTPEGRQFLDHVT 454 +K G++ + GGT+L ML AL+Q+ G++ LD ++ Sbjct: 430 SKFGEILSAKGGTQLAAMLEALNQSEVGKKVLDKIS 465 >ref|ZP_04753898.1| SPFH domain-containing protein [Actinobacillus minor NM305] gb|EER46666.1| SPFH domain-containing protein [Actinobacillus minor NM305] Length = 473 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 200/439 (45%), Positives = 301/439 (68%), Gaps = 11/439 (2%) Query: 23 AITLRRVVPTNMVHIVQTSHSSTPYGRGKPAGNAYYAWPSWVPKLGITVTEFPESIFQVA 82 A+ RRVV TN VHIVQ+ +T YG+ GN YYA+PSW+P +G++ P S+F + Sbjct: 20 ALLFRRVVKTNEVHIVQSGGKTTSYGKDTGNGNVYYAFPSWLPVIGVSTIVLPVSVFSIK 79 Query: 83 LNNYEAYDKERLPFVIDAVAFFRVDNAETAAQRVATFDALHTDLKAVLQGAVRRVLATNA 142 ++NYEAYD ERLPFV+D AFFRV ++ AAQRV+ F ++ L ++QG+VR +L++ Sbjct: 80 IDNYEAYDLERLPFVVDITAFFRVADSNLAAQRVSDFHDMNIQLVDIIQGSVRSILSSRN 139 Query: 143 LEDIMQSRAELGAQFTMEVQEQISQWGVLPVKTIEFMDLRDANGSTVINNVMAKEKSRIE 202 L DI+Q R+ELG FT+ V+EQ+ WG+ PVK IE MD+RD+ S VI N+M +KS IE Sbjct: 140 LNDILQVRSELGDDFTLAVKEQLKNWGIEPVKNIELMDIRDSGNSKVIFNIMEIKKSFIE 199 Query: 203 MESRVKVAENQRQAELAEIDAKRTVEVQRQDAAQQVGLRTAEKEKQVGIANEQAQQEIKA 262 ESR++VA NQ++A++AEI+AK+ +V+RQ+A + VGL+T E +++V ++NEQAQQ +K Sbjct: 200 KESRIEVARNQKEAQIAEIEAKKEADVKRQEAEKAVGLKTVENQREVAVSNEQAQQLVKE 259 Query: 263 AAKTTTERDMDVKKVQEVRGAEIARDVAAVRAEQEKQVAVVNADAQKQVQVINADAQKQA 322 K T ER+M+VK+V E++ AEIA+DV V+A+QEK+ + A+A K +I+++A++Q Sbjct: 260 QEKITKEREMEVKRVAEIKQAEIAKDVEIVKADQEKRTQEIKAEANKNALIIDSEAERQH 319 Query: 323 VTTRAEGDLAAAL-----------KEADGVRARGEAAAAAEQAMLMAPVTTQIQLAKEIG 371 AEG+ A KEA G+ G A A A+Q + ++ V+ QI+LAKEIG Sbjct: 320 QILVAEGEKQKAFLAAEALLETKDKEAQGIAKIGAAEAEAKQKLEISLVSGQIELAKEIG 379 Query: 372 ANAGYQQYLITIKQVEVGRDVGLEMARAMQHADLKVIANAGDMQQGVAKLGDLFTPAGGT 431 N GYQ YLI+I+Q+E + +G+E A+A+ H+D+K I N + +G+ ++G+LF+ GGT Sbjct: 380 GNEGYQSYLISIRQIEANQAIGIEQAKALSHSDMKFIINDERVDKGIQRVGELFSSTGGT 439 Query: 432 KLTGMLAALSQTPEGRQFL 450 K+ L L+Q+ G+ + Sbjct: 440 KIAATLEGLNQSELGKALI 458 >ref|ZP_07805096.1| spfh domain / band 7 family protein [Helicobacter cinaedi CCUG 18818] gb|EFR45551.1| spfh domain / band 7 family protein [Helicobacter cinaedi CCUG 18818] Length = 466 Score = 362 bits (929), Expect = 8e-98, Method: Composition-based stats. Identities = 209/452 (46%), Positives = 303/452 (67%), Gaps = 2/452 (0%) Query: 9 IAAVAAILLLVLIIAITLRRVVPTNMVHIVQTSHSSTPYGRGKPAGNAYYAWPSWVPKLG 68 IA VAAILL+V I + R VV TN VHIVQ++ + YG+ GN YY +PSW P +G Sbjct: 10 IAVVAAILLIV--IPLFFRVVVSTNEVHIVQSARKTLSYGKDTGNGNTYYEFPSWFPLIG 67 Query: 69 ITVTEFPESIFQVALNNYEAYDKERLPFVIDAVAFFRVDNAETAAQRVATFDALHTDLKA 128 +T P S+F + + YEAYD RLPFV+D AFFRV+++ AAQRV F LHT L+ Sbjct: 68 VTKIVLPVSVFSIQIEGYEAYDLGRLPFVVDITAFFRVNDSNLAAQRVRDFTDLHTQLED 127 Query: 129 VLQGAVRRVLATNALEDIMQSRAELGAQFTMEVQEQISQWGVLPVKTIEFMDLRDANGST 188 ++QG++R +L++ LEDI+Q R+ELG FT V+EQ+ WG+ PVK IE MD+RD+ S Sbjct: 128 IIQGSIRSILSSRNLEDILQVRSELGDDFTESVKEQLKNWGIEPVKNIELMDIRDSKVSQ 187 Query: 189 VINNVMAKEKSRIEMESRVKVAENQRQAELAEIDAKRTVEVQRQDAAQQVGLRTAEKEKQ 248 VI N+M K+ S IE ESR+KVA N+++A++AEI+A++ EV++Q+A + +GL+T E E++ Sbjct: 188 VIANIMNKKISEIEKESRIKVANNKKEAQMAEIEAQQATEVKQQEANKTIGLKTVENERE 247 Query: 249 VGIANEQAQQEIKAAAKTTTERDMDVKKVQEVRGAEIARDVAAVRAEQEKQVAVVNADAQ 308 V I+ EQA Q IK KTT E+ M+V +V++V+ AEI +D V+AE+EK+ ++A+A+ Sbjct: 248 VAISREQANQAIKEQEKTTREKTMEVLRVEKVKQAEINKDAEIVKAEEEKKKIELDAEAR 307 Query: 309 KQVQVINADAQKQAVTTRAEGDLAAALKEADGVRARGEAAAAAEQAMLMAPVTTQIQLAK 368 K + +A+A K+ A L KE+ G+ G A A + + +APVT QI LAK Sbjct: 308 KAATIRSAEADKERQFLEASALLEMKDKESQGILKIGTAEAESLKLKELAPVTAQITLAK 367 Query: 369 EIGANAGYQQYLITIKQVEVGRDVGLEMARAMQHADLKVIANAGDMQQGVAKLGDLFTPA 428 EIG N GYQQYL+TI+QVE +G+E A+A+ AD+K+IAN GD+Q G++K+G++ + Sbjct: 368 EIGENEGYQQYLVTIRQVEANEKIGIEQAKALASADMKIIANGGDVQNGISKVGEILSSK 427 Query: 429 GGTKLTGMLAALSQTPEGRQFLDHVTPLLAKG 460 GG + ML L+Q G+ L T + +G Sbjct: 428 GGMSMGAMLEGLAQIDIGKDLLKKFTTIKGQG 459 >ref|YP_001407965.1| SPFH domain-containing protein [Campylobacter curvus 525.92] gb|EAU00658.1| spfh domain / band 7 family protein [Campylobacter curvus 525.92] Length = 477 Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats. Identities = 205/439 (46%), Positives = 294/439 (66%), Gaps = 11/439 (2%) Query: 27 RRVVPTNMVHIVQTSHSSTPYGRGKPAGNAYYAWPSWVPKLGITVTEFPESIFQVALNNY 86 RRVV TN VHIVQ++ + YG+ GN+YY +PSW+P G+T P S+F + + +Y Sbjct: 28 RRVVETNEVHIVQSARKTMSYGKDTGNGNSYYEFPSWMPIFGVTKIVLPVSVFSIKIEDY 87 Query: 87 EAYDKERLPFVIDAVAFFRVDNAETAAQRVATFDALHTDLKAVLQGAVRRVLATNALEDI 146 EAYD RLPFV+D AFFR+ ++ AAQRV FD L+ L ++QG++R +L++ LEDI Sbjct: 88 EAYDLGRLPFVVDITAFFRISDSNLAAQRVNNFDDLNNQLTNIIQGSIRSILSSRVLEDI 147 Query: 147 MQSRAELGAQFTMEVQEQISQWGVLPVKTIEFMDLRDANGSTVINNVMAKEKSRIEMESR 206 +Q R+ELG FT V+ Q+ WG+ PVK IE MD+RD S VI N+M K+KS IE ESR Sbjct: 148 LQIRSELGDDFTKAVKTQLENWGIEPVKNIELMDIRDNRDSKVIFNIMEKKKSLIEKESR 207 Query: 207 VKVAENQRQAELAEIDAKRTVEVQRQDAAQQVGLRTAEKEKQVGIANEQAQQEIKAAAKT 266 ++VA N++ A++AEI+AK+ EV++Q+A + VGL+T E E++V I+ EQA+Q IK K Sbjct: 208 IEVANNKKLAQIAEIEAKQATEVKQQEANKMVGLKTVENEREVSISKEQAEQLIKDQQKI 267 Query: 267 TTERDMDVKKVQEVRGAEIARDVAAVRAEQEKQVAVVNADAQKQVQVINADAQKQAVTTR 326 T E+ M+V +V +V+ AEI + V V+AEQE++ ++A+A+K + A+A ++ Sbjct: 268 TQEKAMEVVRVNDVKQAEIKKQVEIVKAEQEQRKIEIDAEARKNAVIREAEATRENQILI 327 Query: 327 AEGD-----LAAAL------KEADGVRARGEAAAAAEQAMLMAPVTTQIQLAKEIGANAG 375 A+GD LAAA KEA G G A A A + +APV QI+LAKEIG N G Sbjct: 328 AQGDKEKQFLAAAALLEMKDKEAQGTLKIGTAEAEALRLKELAPVNAQIELAKEIGENQG 387 Query: 376 YQQYLITIKQVEVGRDVGLEMARAMQHADLKVIANAGDMQQGVAKLGDLFTPAGGTKLTG 435 YQ YLI+IKQ+E RD+GLE A+A+ ADLK+IAN G + +G+ K G++ + GGT L Sbjct: 388 YQTYLISIKQIEANRDIGLEQAKALSTADLKIIANEGSVGEGMGKFGEILSSKGGTNLAA 447 Query: 436 MLAALSQTPEGRQFLDHVT 454 ML AL+Q+ G++ L+ ++ Sbjct: 448 MLEALNQSEIGKKVLNKIS 466