BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5076.p (201 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAM32561.1| 50S ribosomal subunit protein L25 [Herbaspirillu... 347 5e-94 ref|YP_001354819.1| large subunit ribosomal protein L25 [Janthin... 292 2e-77 ref|YP_004751269.1| 50S ribosomal protein L25p [Collimonas fungi... 291 3e-77 ref|YP_001101129.1| 50S ribosomal protein L25/general stress pro... 291 4e-77 ref|YP_002912900.1| 50S ribosomal protein L25/general stress pro... 256 2e-66 >emb|CAM32561.1| 50S ribosomal subunit protein L25 [Herbaspirillum seropedicae] Length = 202 Score = 347 bits (891), Expect = 5e-94, Method: Composition-based stats. Identities = 182/188 (96%), Positives = 186/188 (98%) Query: 1 MKVIAFPRNEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60 MKVIAFPR EQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL Sbjct: 1 MKVIAFPRKEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60 Query: 61 DLEIDGKVEQVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLHFVNAEISPAVKLHA 120 DLEI+GKVEQVLLRDFQVHA+KQLVLHVDFQRVDASQKLHTKVPLHFVNAE+SPAVKLH Sbjct: 61 DLEIEGKVEQVLLRDFQVHAYKQLVLHVDFQRVDASQKLHTKVPLHFVNAEVSPAVKLHG 120 Query: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVTQENLTIATA 180 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVTQENLTIATA Sbjct: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVTQENLTIATA 180 Query: 181 TVPAGQVA 188 TVPAGQV+ Sbjct: 181 TVPAGQVS 188 >ref|YP_001354819.1| large subunit ribosomal protein L25 [Janthinobacterium sp. Marseille] sp|A6T2S2|RL25_JANMA RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC gb|ABR88912.1| large subunit ribosomal protein L25 [Janthinobacterium sp. Marseille] Length = 214 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 153/190 (80%), Positives = 168/190 (88%), Gaps = 3/190 (1%) Query: 1 MKVIAFPRNEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60 MKVIAF R E GTGASRR R AG TPGIVYGGTAAP+NI++DHNALYHALKKE FHSSIL Sbjct: 1 MKVIAFARKELGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60 Query: 61 DLEIDGKVEQVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLHFVNAEISPAVKLHA 120 DLE+DGKVEQVLLRDFQVHA+KQLVLH DFQRVDA QK+H KVPLHFVNAE SPAVKLH Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFVNAETSPAVKLHG 120 Query: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVT---QENLTI 177 GIISHVA+ELD+TCLP +LPEF+EVDLA LDVG SIHLAD+KLP GV AV ++N TI Sbjct: 121 GIISHVASELDITCLPSDLPEFVEVDLANLDVGHSIHLADIKLPKGVAAVIHGGEDNPTI 180 Query: 178 ATATVPAGQV 187 ATA+VPAG+V Sbjct: 181 ATASVPAGKV 190 >ref|YP_004751269.1| 50S ribosomal protein L25p [Collimonas fungivorans Ter331] gb|AEK60446.1| LSU ribosomal protein L25p [Collimonas fungivorans Ter331] Length = 208 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 149/187 (79%), Positives = 167/187 (89%) Query: 1 MKVIAFPRNEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60 MKVIAF R EQGTGASRRLR AGQTPGIVYGG+ AP+NI++DHNALYHALKKETFHSSIL Sbjct: 1 MKVIAFVRKEQGTGASRRLRNAGQTPGIVYGGSDAPVNISLDHNALYHALKKETFHSSIL 60 Query: 61 DLEIDGKVEQVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLHFVNAEISPAVKLHA 120 DLEIDG V++VLLRDFQVHA+KQLVLH DFQRVDA Q +H KVPLHFVNAEI+PAVKL Sbjct: 61 DLEIDGAVQKVLLRDFQVHAYKQLVLHADFQRVDAKQAIHVKVPLHFVNAEIAPAVKLSG 120 Query: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVTQENLTIATA 180 IISHV EL+VTCLP +LPEFIEVDL ++VG SIHLADLKLP GV AV+QEN+TIATA Sbjct: 121 AIISHVFTELEVTCLPADLPEFIEVDLTNIEVGHSIHLADLKLPKGVAAVSQENVTIATA 180 Query: 181 TVPAGQV 187 ++PAG+V Sbjct: 181 SIPAGKV 187 >ref|YP_001101129.1| 50S ribosomal protein L25/general stress protein Ctc [Herminiimonas arsenicoxydans] sp|A4G921|RL25_HERAR RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC emb|CAL63008.1| 50S ribosomal protein L25 (General stress protein CTC) [Herminiimonas arsenicoxydans] Length = 210 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 153/190 (80%), Positives = 168/190 (88%), Gaps = 3/190 (1%) Query: 1 MKVIAFPRNEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60 MKVIAF RN+ GTGASRR R AG TPGIVYGGTAAP+NI++DHNALYHALKKE FHSSIL Sbjct: 1 MKVIAFARNDLGTGASRRQRIAGLTPGIVYGGTAAPVNISLDHNALYHALKKEAFHSSIL 60 Query: 61 DLEIDGKVEQVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLHFVNAEISPAVKLHA 120 DLE+DGKVEQVLLRDFQVHA+KQLVLH DFQRVDA QK+H KVPLHF+NAEISPAVKL A Sbjct: 61 DLEVDGKVEQVLLRDFQVHAYKQLVLHADFQRVDAKQKIHVKVPLHFINAEISPAVKLQA 120 Query: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVT---QENLTI 177 GIISHVA ELD+TCLP NLPEF+EVDLA L+VG SIHLAD+KLP GV AV ++N TI Sbjct: 121 GIISHVATELDITCLPGNLPEFVEVDLATLEVGHSIHLADIKLPKGVVAVIHGGEDNPTI 180 Query: 178 ATATVPAGQV 187 ATA VPAG+V Sbjct: 181 ATAAVPAGKV 190 >ref|YP_002912900.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia glumae BGR1] gb|ACR30196.1| 50S ribosomal protein L25 [Burkholderia glumae BGR1] Length = 204 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 135/203 (66%), Positives = 158/203 (77%), Gaps = 3/203 (1%) Query: 1 MKVIAFPRNEQGTGASRRLRRAGQTPGIVYGGTAAPLNIAVDHNALYHALKKETFHSSIL 60 MKV+AF R +QGTGASRRLR G+T GIVYGG AAP I +DHNAL+HALKKE FHSSIL Sbjct: 1 MKVVAFERTQQGTGASRRLRNTGKTTGIVYGGEAAPQMIELDHNALWHALKKEAFHSSIL 60 Query: 61 DLEIDGKVEQVLLRDFQVHAFKQLVLHVDFQRVDASQKLHTKVPLHFVNAEISPAVKLHA 120 DLE+ GK + VLLRD Q H F+QLVLHVDFQRVDAS+KLHTKVP+HF+NAE+SPAVKL + Sbjct: 61 DLEVAGKSQSVLLRDVQYHPFRQLVLHVDFQRVDASKKLHTKVPVHFLNAEVSPAVKLSS 120 Query: 121 GIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLKLPNGVTAVTQ---ENLTI 177 ++SHV ELDV CLP LPEF+EVDL+KL+ GQS+H D+ LPNGV V EN I Sbjct: 121 AVVSHVITELDVECLPSALPEFLEVDLSKLEAGQSVHAKDITLPNGVALVAHIDAENPVI 180 Query: 178 ATATVPAGQVAAEGEAAGGAEEA 200 ATAT+PAG V+ + A G A Sbjct: 181 ATATIPAGAVSDDAAAGEGETPA 203