BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5074.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777299.1| 4-diphosphocytidyl-2C-methyl-D-erythritol ki... 381 e-104 ref|YP_004751271.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol k... 261 6e-68 ref|YP_001354817.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol k... 253 1e-65 ref|YP_001101127.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol k... 244 7e-63 ref|ZP_08273344.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol ki... 234 1e-59 >ref|YP_003777299.1| 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Herbaspirillum seropedicae SmR1] gb|ADJ65391.1| 4-diphosphocytidyl-2C-methyl-D-erythritol kinase protein [Herbaspirillum seropedicae SmR1] Length = 289 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 192/200 (96%), Positives = 196/200 (98%) Query: 40 ITVHKVLPMGGGVGGGSSDAATTLMVLNHLWKCGYNRASLMEMGLKLGADVPFFLFGRNA 99 ITVHKVLPMGGGVGGGSSDAATTL+VLNHLWKCGYNRASLMEMGLKLGADVPFFLFGRNA Sbjct: 90 ITVHKVLPMGGGVGGGSSDAATTLLVLNHLWKCGYNRASLMEMGLKLGADVPFFLFGRNA 149 Query: 100 FAEGVGEELSPLRTADCWYVVIEPGVSVPTSIIFSSKLLTRDTKPIRITDFPDATKQVAS 159 FAEGVGEELS LRTADCWYVVIEPGVSVPTSIIFSSKLLTRDT+P+RITDFPDATKQVAS Sbjct: 150 FAEGVGEELSVLRTADCWYVVIEPGVSVPTSIIFSSKLLTRDTQPVRITDFPDATKQVAS 209 Query: 160 SFGKNDLEMVATAHFPEVAAAVEWLGKFGSARMTGSGACVFSAFEHEQQADEVLKQLPSR 219 SFGKNDLEMVATAHFPEVAAAVEWLGKFG+ARMTGSGACVF AFEHE QADEVLK LPSR Sbjct: 210 SFGKNDLEMVATAHFPEVAAAVEWLGKFGNARMTGSGACVFCAFEHEHQADEVLKTLPSR 269 Query: 220 WIGWKAKAMQEHPLAHLVQS 239 WIGWKAKAMQEHPLAHLVQS Sbjct: 270 WIGWKAKAMQEHPLAHLVQS 289 >ref|YP_004751271.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Collimonas fungivorans Ter331] gb|AEK60448.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Collimonas fungivorans Ter331] Length = 297 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 133/198 (67%), Positives = 159/198 (80%), Gaps = 3/198 (1%) Query: 40 ITVHKVLPMGGGVGGGSSDAATTLMVLNHLWKCGYNRASLMEMGLKLGADVPFFLFGRNA 99 I + K LPMGGG+GGGSSDAATTLM LNHLW+ G +R LM +GL+LGADVPFFLFGRNA Sbjct: 101 IAIEKNLPMGGGLGGGSSDAATTLMALNHLWQGGLSREELMVLGLQLGADVPFFLFGRNA 160 Query: 100 FAEGVGEELSPLRTADCWYVVIEPGVSVPTSIIFSSKLLTRDTKPIRITDFPDATKQVAS 159 FAEG+GE L L T W+V+I+PGV++PT++IFSS LTR TKP+++TDF A+K++ Sbjct: 161 FAEGIGESLQKLDTPGLWFVIIQPGVTIPTALIFSSSELTRSTKPVKMTDFSIASKKL-- 218 Query: 160 SFGKNDLEMVATAHFPEVAAAVEWLGKFGSARMTGSGACVFSAFEHEQQADEVLKQLPSR 219 FGKNDLE VA FPEVA A++WLGK G ARMTGSGACVF F E+QADEVLK +P+R Sbjct: 219 -FGKNDLEPVAARQFPEVADAIKWLGKHGDARMTGSGACVFCGFTQEEQADEVLKLVPNR 277 Query: 220 WIGWKAKAMQEHPLAHLV 237 W WKAKAMQEHPLA L+ Sbjct: 278 WKAWKAKAMQEHPLAGLL 295 >ref|YP_001354817.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Janthinobacterium sp. Marseille] sp|A6T2S0|ISPE_JANMA RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; AltName: Full=4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase gb|ABR88561.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Janthinobacterium sp. Marseille] Length = 289 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 131/200 (65%), Positives = 157/200 (78%), Gaps = 4/200 (2%) Query: 40 ITVHKVLPMGGGVGGGSSDAATTLMVLNHLWKCGYNRASLMEMGLKLGADVPFFLFGRNA 99 I V K LPMGGG+GGGSSDAATTL+ LNHLW+ G +RA LM +GL+LGADVPFF+FG+NA Sbjct: 94 IAVEKKLPMGGGLGGGSSDAATTLLALNHLWQTGLSRAELMALGLQLGADVPFFIFGQNA 153 Query: 100 FAEGVGEELSPLRTADCWYVVIEPGVSVPTSIIFSSKLLTRDTKPIRITDFPDATKQVAS 159 FAEG+GE L + T D W+VVIEPGVSVPT IFSS LTRDTKP++I+DF A + Sbjct: 154 FAEGIGEALVEVETPDRWFVVIEPGVSVPTPQIFSSTELTRDTKPVKISDFSGAQE---- 209 Query: 160 SFGKNDLEMVATAHFPEVAAAVEWLGKFGSARMTGSGACVFSAFEHEQQADEVLKQLPSR 219 SFGKNDL++VA FP +A A++WLG++G ARMTGSGACVF FE EQQAD VL +P Sbjct: 210 SFGKNDLQVVAEKLFPPIAEAIQWLGQYGDARMTGSGACVFCPFEQEQQADAVLTTVPPH 269 Query: 220 WIGWKAKAMQEHPLAHLVQS 239 W WKAKA++ HPLA+L QS Sbjct: 270 WKAWKAKAIKHHPLAYLQQS 289 >ref|YP_001101127.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Herminiimonas arsenicoxydans] sp|A4G919|ISPE_HERAR RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; AltName: Full=4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase emb|CAL63006.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) [Herminiimonas arsenicoxydans] Length = 286 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 125/197 (63%), Positives = 153/197 (77%), Gaps = 4/197 (2%) Query: 40 ITVHKVLPMGGGVGGGSSDAATTLMVLNHLWKCGYNRASLMEMGLKLGADVPFFLFGRNA 99 I + K LPMGGG+GGGSSDAATTL+ LNHLW+ G RA LM +GL+LGADVPFFLFG+NA Sbjct: 92 IAIEKKLPMGGGLGGGSSDAATTLLALNHLWQTGLTRAELMALGLQLGADVPFFLFGQNA 151 Query: 100 FAEGVGEELSPLRTADCWYVVIEPGVSVPTSIIFSSKLLTRDTKPIRITDFPDATKQVAS 159 FAEG+GE L ++T + W++VIEPGVSVPT IFSS LTRDTKP++I+DF A + Sbjct: 152 FAEGIGEALMAVKTPESWFLVIEPGVSVPTQQIFSSLELTRDTKPVKISDFSRAQE---- 207 Query: 160 SFGKNDLEMVATAHFPEVAAAVEWLGKFGSARMTGSGACVFSAFEHEQQADEVLKQLPSR 219 SFGKNDL++VA FP +A A++WL +FG ARMTGSGACVF F+ EQQ D VL +P + Sbjct: 208 SFGKNDLQVVAANLFPPIADAIKWLQQFGDARMTGSGACVFCPFKEEQQVDAVLATVPQQ 267 Query: 220 WIGWKAKAMQEHPLAHL 236 W WKAKA+ HPLA+L Sbjct: 268 WKAWKAKAITHHPLAYL 284 >ref|ZP_08273344.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33176.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Oxalobacteraceae bacterium IMCC9480] Length = 285 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 118/206 (57%), Positives = 152/206 (73%), Gaps = 4/206 (1%) Query: 31 AASLTWALSITVHKVLPMGGGVGGGSSDAATTLMVLNHLWKCGYNRASLMEMGLKLGADV 90 A + I + K LPMGGG+GGGSSDAATT+M LNHLW+ G R ++ ++GL+LGADV Sbjct: 83 ATGSRYGADIAIEKRLPMGGGLGGGSSDAATTMMALNHLWQTGMTRTAMQQLGLQLGADV 142 Query: 91 PFFLFGRNAFAEGVGEELSPLRTADCWYVVIEPGVSVPTSIIFSSKLLTRDTKPIRITDF 150 PFFLFG NAFAEG+GE+L L T +CWY+V+EPGVS+PT +IF+S LTR++KP+R+ DF Sbjct: 143 PFFLFGSNAFAEGIGEQLIALNTPECWYLVLEPGVSIPTPVIFASSELTRNSKPVRMLDF 202 Query: 151 PDATKQVASSFGKNDLEMVATAHFPEVAAAVEWLGKFGSARMTGSGACVFSAFEHEQQAD 210 A FGKNDL+ VA+ FP VA A+EWLG ARMTGSGACVF AF + +A Sbjct: 203 SGAL----IGFGKNDLQAVASTLFPPVAEAIEWLGGPEVARMTGSGACVFRAFTSKDEAT 258 Query: 211 EVLKQLPSRWIGWKAKAMQEHPLAHL 236 EVL+++P RW W A+++ +HPLA L Sbjct: 259 EVLEKVPQRWTAWIAQSLNQHPLAQL 284