BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5071.p (538 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777297.1| TPR repeat containing protein [Herbaspirillu... 835 0.0 ref|YP_004751273.1| hypothetical protein CFU_0614 [Collimonas fu... 551 e-154 ref|YP_001354815.1| hypothetical protein mma_3125 [Janthinobacte... 540 e-151 ref|YP_001101125.1| TPR repeat-containing protein [Herminiimonas... 534 e-149 ref|ZP_08273346.1| putative signal peptide containing protein [O... 522 e-146 >ref|YP_003777297.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] gb|ADJ65389.1| TPR repeat containing protein [Herbaspirillum seropedicae SmR1] Length = 600 Score = 835 bits (2158), Expect = 0.0, Method: Composition-based stats. Identities = 471/537 (87%), Positives = 509/537 (94%) Query: 1 MELSEDILYKVLTAEIAFQRGQWQSAYVTMLGTAQQTRDPRLAKRAAEIALAARRPNEAL 60 +ELSEDILYKVLTAEIAFQRGQWQ AYVTML AQQTRDPRLAKRAAE+A+ AR+P+EAL Sbjct: 63 VELSEDILYKVLTAEIAFQRGQWQPAYVTMLAAAQQTRDPRLAKRAAEMAVTARQPSEAL 122 Query: 61 VAVRLWTELAPHSDEALQNYLGLIMLSDSVDEIEPLLTQRLADAAPQARGPMLLQIQRLL 120 VAVRLWTELAPHSDEALQNYLGLIMLSDSVDEIEPLLTQRLADAAPQARGPMLLQIQRLL Sbjct: 123 VAVRLWTELAPHSDEALQNYLGLIMLSDSVDEIEPLLTQRLADAAPQARGPMLLQIQRLL 182 Query: 121 ARAKDKQASYTILQNISKPYGDLMETHLALAQGAFGMGDGTTAQREAAAAMKIKPDSELA 180 RAKDKQAS+ ILQ IS+PYGDLMETHLALAQGAF +GD T AQREA AAMKIKPDSELA Sbjct: 183 VRAKDKQASFAILQKISQPYGDLMETHLALAQGAFSVGDTTYAQREARAAMKIKPDSELA 242 Query: 181 VLTAAQVASNNKDATKLVTDFLRKYPDAREVRVAYARSLVEQKDFKLARTQFETLLKEDG 240 VLTAAQVA +NK+ATKLVT+FLRKYPDAREVRVAYAR+LVEQKD+K ARTQFE LLKEDG Sbjct: 243 VLTAAQVAPDNKEATKLVTEFLRKYPDAREVRVAYARTLVEQKDYKDARTQFEALLKEDG 302 Query: 241 EDATTLFALGVLSAQTDQLKDAEYYLQRYLQVLSAQPEEDRDPSQALLLLSRIAEERRDL 300 ED TTLFALGVLSAQTDQLKDAEYYLQRYLQVLSA PEEDRDPSQA+LLLSRIAEERRD+ Sbjct: 303 EDPTTLFALGVLSAQTDQLKDAEYYLQRYLQVLSAMPEEDRDPSQAILLLSRIAEERRDI 362 Query: 301 DSALRYLDQAEPGTEGYLNIQVRRAQLLARKNDIEGARKALEDAQAESTNDGEQLQLLLA 360 D ALRYLD+ EPGTEGY+NIQVRRAQLLARK+DIEGARKALE AQ+ESTNDGEQLQLL A Sbjct: 363 DGALRYLDRGEPGTEGYVNIQVRRAQLLARKSDIEGARKALEAAQSESTNDGEQLQLLQA 422 Query: 361 ESSLLRDANRNQEAADVLKGGLQRFPNNTDLLYDYSMVLEKLGKFDEMEKSLRRVMQLAP 420 ES+LLRDANRNQEAADV+K GL+RFPNNTDLLYDY+MVL+KLGK+DEME SLRRV++LAP Sbjct: 423 ESALLRDANRNQEAADVIKAGLERFPNNTDLLYDYAMVLDKLGKYDEMEASLRRVIKLAP 482 Query: 421 GNQHAYNALGYSLADRNIRLPEALELIQKAADLAPEDPFIADSLGWVLFRMGRAEQAETQ 480 GNQHAYNALGYSLADRN+RLPEALELI+KAA++APED FIADSLGWVLFRMGR ++AETQ Sbjct: 483 GNQHAYNALGYSLADRNVRLPEALELIRKAAEMAPEDAFIADSLGWVLFRMGRLDEAETQ 542 Query: 481 MRRAYGLRPDVEIGVHLGEVLWTNGKQDEARKVWREVSLKEPNNEVLKSTLSRLNVK 537 MRRAYGLRPD EIGVHLGEVLWT GKQDEARK+WR+V+ K+P NEVLKSTL+RLNVK Sbjct: 543 MRRAYGLRPDAEIGVHLGEVLWTRGKQDEARKIWRDVAQKDPANEVLKSTLTRLNVK 599 >ref|YP_004751273.1| hypothetical protein CFU_0614 [Collimonas fungivorans Ter331] gb|AEK60450.1| conserved hypothetical protein [Collimonas fungivorans Ter331] Length = 636 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 314/536 (58%), Positives = 418/536 (77%), Gaps = 3/536 (0%) Query: 3 LSEDILYKVLTAEIAFQRGQWQSAYVTMLGTAQQTRDPRLAKRAAEIALAARRPNEALVA 62 L+++IL+KVL++E+AFQRG WQSAYVT+LG AQQTRDPRLA+RAAE+AL+A++ NEALVA Sbjct: 104 LTKEILFKVLSSEVAFQRGNWQSAYVTLLGAAQQTRDPRLARRAAEMALSAKQANEALVA 163 Query: 63 VRLWTELAPHSDEALQNYLGLIMLSDSVDEIEPLLTQRLADAAPQARGPMLLQIQRLLAR 122 +RLW ELAP S+EA Q YLG IMLS+++ E +P+L +RL DA PQARG M+LQIQRLLAR Sbjct: 164 IRLWRELAPDSEEATQYYLGFIMLSNNLAEAKPILEKRLQDAPPQARGVMMLQIQRLLAR 223 Query: 123 AKDKQASYTILQNISKPYGDLMETHLALAQGAFGMGDGTTAQREAAAAMKIKPDSELAVL 182 A+DK ++T+L+ + PY + E HLALAQ AF G+ AQ EA A+ +KPDSELA+L Sbjct: 224 AQDKAGAFTLLEQLVTPYTAMSEAHLALAQQAFSGGNSVRAQEEAKIALNLKPDSELAIL 283 Query: 183 TAAQVASNNKDATKLVTDFLRKYPDAREVRVAYARSLVEQKDFKLARTQFETLLKEDGED 242 T+AQVA+++ + +++T+FL+KYP++REVRVAYAR+L++QK ++ AR+QFE LLK D +D Sbjct: 284 TSAQVAADSTEVERVLTEFLKKYPNSREVRVAYARTLIDQKQYEKARSQFEILLKNDKQD 343 Query: 243 ATTLFALGVLSAQTDQLKDAEYYLQRYLQVLSAQPEEDRDPSQALLLLSRIAEERRDLDS 302 ATTL ALG+L+AQ K AE YL Y+ LS P+E RD +QALL+L++IA +R D D+ Sbjct: 344 ATTLLALGLLNAQIGDTKAAERYLVSYIDQLSKHPDEARDNTQALLILAQIAADRNDTDA 403 Query: 303 ALRYLDQAEPGTEGYLNIQVRRAQLLARKNDIEGARKALEDAQAESTNDGEQLQLLLAES 362 AL++L Q EPG + YL+ Q+RRAQLL+++ D++GAR+ L A+ ++ + E+ Q+ E+ Sbjct: 404 ALKWLAQVEPG-DAYLDAQLRRAQLLSKRGDLDGARRVL--AEIDTNGEREKTQVTQVEA 460 Query: 363 SLLRDANRNQEAADVLKGGLQRFPNNTDLLYDYSMVLEKLGKFDEMEKSLRRVMQLAPGN 422 LLR+ANR QEA VL+ L+ P+N DLLYDY+M EKL ME +LR+++ LAP N Sbjct: 461 QLLREANRPQEAFKVLETALKTQPDNPDLLYDYAMAAEKLNNLSTMETALRKLIALAPDN 520 Query: 423 QHAYNALGYSLADRNIRLPEALELIQKAADLAPEDPFIADSLGWVLFRMGRAEQAETQMR 482 Q AYNALGYSLADRNIRLPEAL LIQKA LAP+DPFI DS+GWV +R+G +AET++R Sbjct: 521 QQAYNALGYSLADRNIRLPEALTLIQKALTLAPQDPFIVDSMGWVQYRLGNLGEAETRLR 580 Query: 483 RAYGLRPDVEIGVHLGEVLWTNGKQDEARKVWREVSLKEPNNEVLKSTLSRLNVKL 538 AYGL PD EI VHLGEVLW G++ +A+K+WREV K+P N+ LK+TL RL KL Sbjct: 581 TAYGLLPDPEIAVHLGEVLWVKGQKTDAQKLWREVLQKDPQNDALKNTLVRLGAKL 636 >ref|YP_001354815.1| hypothetical protein mma_3125 [Janthinobacterium sp. Marseille] gb|ABR91232.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 598 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 299/538 (55%), Positives = 402/538 (74%), Gaps = 3/538 (0%) Query: 1 MELSEDILYKVLTAEIAFQRGQWQSAYVTMLGTAQQTRDPRLAKRAAEIALAARRPNEAL 60 ++L+ +LYK+L AE+A QRG WQ AYV+ML TAQ+TRDPRLA+RAA++AL+A++ +EAL Sbjct: 64 VQLTAPLLYKLLRAELALQRGDWQLAYVSMLVTAQETRDPRLAERAAKVALSAKQVSEAL 123 Query: 61 VAVRLWTELAPHSDEALQNYLGLIMLSDSVDEIEPLLTQRLADAAPQARGPMLLQIQRLL 120 AVRLW ELAP+SDEA Q YLGLI+L D++ E P+L +RL A+PQ RG ++L+IQRLL Sbjct: 124 SAVRLWHELAPNSDEANQFYLGLIILGDNLKEARPILIERLRLASPQTRGVLILEIQRLL 183 Query: 121 ARAKDKQASYTILQNISKPYGDLMETHLALAQGAFGMGDGTTAQREAAAAMKIKPDSELA 180 A KDK A++ +L+ ++ PY DL+ETHLALAQ AF D A EA A+K+KPD ELA Sbjct: 184 ANTKDKNAAFALLEEVTTPYQDLVETHLALAQSAFTKNDIARANSEAHIALKLKPDMELA 243 Query: 181 VLTAAQVASNNKDATKLVTDFLRKYPDAREVRVAYARSLVEQKDFKLARTQFETLLKEDG 240 L AQ S+ +A +++TDF++ P AREVRVAYA+ L++ K + AR QFE LLK+D Sbjct: 244 ALMVAQSTSSRAEALQILTDFIKANPKAREVRVAYAKILIDNKQYDQAREQFEQLLKDDP 303 Query: 241 EDATTLFALGVLSAQTDQLKDAEYYLQRYLQVLSAQPEEDRDPSQALLLLSRIAEERRDL 300 +D T L+A+G+L AQT+ + AE YL YLQ L P+E RDP QA L++S+IAE+R+D Sbjct: 304 KDLTILYAMGILGAQTNDIPMAEKYLSAYLQALEDNPDESRDPVQAQLIMSQIAEDRKDY 363 Query: 301 DSALRYLDQAEPGTEGYLNIQVRRAQLLARKNDIEGARKALEDAQAESTNDGEQLQLLLA 360 +AL++L Q EPG Y+ Q+R AQL+A D+ G R L + + EQ+Q+++A Sbjct: 364 ATALKWLAQVEPGP-AYMAAQIRSAQLMAIGGDLNGGRNLLSHLKPQGQR--EQIQVIVA 420 Query: 361 ESSLLRDANRNQEAADVLKGGLQRFPNNTDLLYDYSMVLEKLGKFDEMEKSLRRVMQLAP 420 ++ LLRDANR EA VL GL+RFP++T LLYDY+M+ EK K D ME +LR++++LAP Sbjct: 421 DAQLLRDANRVPEAMTVLSNGLKRFPDDTGLLYDYAMLAEKANKMDVMETALRKIIRLAP 480 Query: 421 GNQHAYNALGYSLADRNIRLPEALELIQKAADLAPEDPFIADSLGWVLFRMGRAEQAETQ 480 NQHAYNALGYS ADRNI L EAL LI+KA+ +APEDPFI DS+GWV FR+GR ++AE Sbjct: 481 DNQHAYNALGYSFADRNIHLQEALALIEKASKIAPEDPFIMDSMGWVQFRLGRLQEAENY 540 Query: 481 MRRAYGLRPDVEIGVHLGEVLWTNGKQDEARKVWREVSLKEPNNEVLKSTLSRLNVKL 538 +RRAY +RPDVEIGVHLGEVLW G++ EA+K WR+ + K+P +++LKSTL+RL +L Sbjct: 541 LRRAYAIRPDVEIGVHLGEVLWVKGQRAEAQKFWRDANQKDPQSDLLKSTLTRLRAQL 598 >ref|YP_001101125.1| TPR repeat-containing protein [Herminiimonas arsenicoxydans] emb|CAL63004.1| Conserved hypothetical protein; putative exported protein; putative TPR repeat domain [Herminiimonas arsenicoxydans] Length = 602 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 297/538 (55%), Positives = 408/538 (75%), Gaps = 3/538 (0%) Query: 1 MELSEDILYKVLTAEIAFQRGQWQSAYVTMLGTAQQTRDPRLAKRAAEIALAARRPNEAL 60 ++L+ED+L+K+L AE+A+QRG WQ AYVTML +AQ+TRDPRLA+RAAEIAL+ ++ EAL Sbjct: 68 VDLTEDLLFKLLRAELAYQRGDWQLAYVTMLVSAQETRDPRLARRAAEIALSVKQTGEAL 127 Query: 61 VAVRLWTELAPHSDEALQNYLGLIMLSDSVDEIEPLLTQRLADAAPQARGPMLLQIQRLL 120 AVRLW ELAPHSDEA Q YLGL++L +++ E +P+ T+RL + PQARG ++LQIQRLL Sbjct: 128 SAVRLWRELAPHSDEANQFYLGLVVLGENLAEAKPIFTERLQEVRPQARGLLILQIQRLL 187 Query: 121 ARAKDKQASYTILQNISKPYGDLMETHLALAQGAFGMGDGTTAQREAAAAMKIKPDSELA 180 R KDK A++T+L+ ++ PY +L+ETH+AL+QGAF D ++ E+ A++IKPD E+A Sbjct: 188 VRTKDKNAAFTLLEELTAPYQNLVETHIALSQGAFAKNDLARSRMESKKALEIKPDLEIA 247 Query: 181 VLTAAQVASNNKDATKLVTDFLRKYPDAREVRVAYARSLVEQKDFKLARTQFETLLKEDG 240 VL AQ N+ DA + +T FL K P +R+VR+AYA++L++ K + AR QFE LLK+ Sbjct: 248 VLMLAQATPNSVDALRTLTAFLDKNPKSRDVRIAYAKTLIDDKQLEQARKQFEILLKDQP 307 Query: 241 EDATTLFALGVLSAQTDQLKDAEYYLQRYLQVLSAQPEEDRDPSQALLLLSRIAEERRDL 300 +D T L+A G+L+AQ + + AE YL YLQ L P+E+RDP QALL+LS+I+E+R+D Sbjct: 308 DDLTILYATGILAAQMNDREGAEKYLTTYLQKLEDNPDEERDPVQALLILSQISEDRKDF 367 Query: 301 DSALRYLDQAEPGTEGYLNIQVRRAQLLARKNDIEGARKALEDAQAESTNDGEQLQLLLA 360 +AL++L Q EPG YL+ Q+R AQ++A D+ GAR L + E EQ+Q+++A Sbjct: 368 PAALKWLAQVEPGP-AYLDAQIRSAQIMASAGDLNGARNLLNHLKPEGQR--EQIQVIVA 424 Query: 361 ESSLLRDANRNQEAADVLKGGLQRFPNNTDLLYDYSMVLEKLGKFDEMEKSLRRVMQLAP 420 ++ LLRDANR EA +L GL+RFP +T LLYDY+M+ EK G+FD ME SLR++M+LAP Sbjct: 425 DAQLLRDANRIPEALAILSKGLERFPEDTGLLYDYAMLAEKAGRFDLMENSLRKIMKLAP 484 Query: 421 GNQHAYNALGYSLADRNIRLPEALELIQKAADLAPEDPFIADSLGWVLFRMGRAEQAETQ 480 NQHAYNALGYS A+RNI L EA LI KA+ LAPEDPFI DS+GWV FR+G+ +AE Sbjct: 485 SNQHAYNALGYSFAERNIHLQEAYALIDKASKLAPEDPFIMDSMGWVYFRLGKLREAEDF 544 Query: 481 MRRAYGLRPDVEIGVHLGEVLWTNGKQDEARKVWREVSLKEPNNEVLKSTLSRLNVKL 538 +RRAY +RPDVEIGVHLGEVLW G+++ A+++WRE + K+P +++LK+TL+RL KL Sbjct: 545 LRRAYAIRPDVEIGVHLGEVLWVKGEKEAAQQLWREANQKDPQSDMLKNTLARLRTKL 602 >ref|ZP_08273346.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33178.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] Length = 596 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 290/538 (53%), Positives = 402/538 (74%), Gaps = 3/538 (0%) Query: 1 MELSEDILYKVLTAEIAFQRGQWQSAYVTMLGTAQQTRDPRLAKRAAEIALAARRPNEAL 60 +EL+E++++K+L+AEIAFQRG WQ AY+ M+ AQQTRDPR A+RAAE+A+AA++P EA+ Sbjct: 62 VELTEELMFKLLSAEIAFQRGDWQPAYINMISVAQQTRDPRAARRAAEMAIAAKQPEEAM 121 Query: 61 VAVRLWTELAPHSDEALQNYLGLIMLSDSVDEIEPLLTQRLADAAPQARGPMLLQIQRLL 120 VAVR W LAP SDEA Q Y+G+I+L D + E + + RL D P +R ++LQ+QRLL Sbjct: 122 VAVRFWRALAPKSDEATQYYVGMILLGDDLSEFQEVFALRLRDVRPPSRPLLILQVQRLL 181 Query: 121 ARAKDKQASYTILQNISKPYGDLMETHLALAQGAFGMGDGTTAQREAAAAMKIKPDSELA 180 RAKDK+ ++ +++N+ PY DL ETH+ALAQ AF D A+ EA A+KIKPDSE+A Sbjct: 182 LRAKDKKEAFAVMENLVAPYPDLAETHIALAQAAFSNNDPARARSEAMLALKIKPDSEIA 241 Query: 181 VLTAAQVASNNKDATKLVTDFLRKYPDAREVRVAYARSLVEQKDFKLARTQFETLLKEDG 240 LT AQV + K++ + + +L +PD+RE+R+AY R L+EQ + AR +FETLLK+ Sbjct: 242 ALTLAQVIPDKKESAQSLQSYLSAHPDSREIRIAYGRMLIEQNLYDQARKEFETLLKDQP 301 Query: 241 EDATTLFALGVLSAQTDQLKDAEYYLQRYLQVLSAQPEEDRDPSQALLLLSRIAEERRDL 300 ED TTLFALG+L QT LK AE YL YL+VL+A P+E RDP+QALL+LS+IAEER+D+ Sbjct: 302 EDLTTLFALGILGTQTTDLKSAEQYLTTYLKVLAAHPDESRDPAQALLVLSQIAEERKDI 361 Query: 301 DSALRYLDQAEPGTEGYLNIQVRRAQLLARKNDIEGARKALEDAQAESTNDGEQLQLLLA 360 D+AL YL + E G E Y Q++RAQL+ ++ ++ AR+ L A+ T++ EQ+ ++ Sbjct: 362 DAALAYLARIELG-EAYFGAQIKRAQLMGQRGELTSARQLL--AETSGTSEREQILVIQT 418 Query: 361 ESSLLRDANRNQEAADVLKGGLQRFPNNTDLLYDYSMVLEKLGKFDEMEKSLRRVMQLAP 420 ++ +LRD++ Q+A VL+ G RFP N D+LYDY+M EKL + D+ME +LR+V++LAP Sbjct: 419 DAQVLRDSDLQQQAYLVLETGALRFPENIDVLYDYAMAAEKLDRVDKMEAALRKVIKLAP 478 Query: 421 GNQHAYNALGYSLADRNIRLPEALELIQKAADLAPEDPFIADSLGWVLFRMGRAEQAETQ 480 NQHAYNALGYSLA+RN+RLPEA +LI++A LAP+DPFI DS+GWV +RMG+ +AET Sbjct: 479 TNQHAYNALGYSLAERNVRLPEAFKLIEQALTLAPDDPFIMDSMGWVQYRMGKLPEAETL 538 Query: 481 MRRAYGLRPDVEIGVHLGEVLWTNGKQDEARKVWREVSLKEPNNEVLKSTLSRLNVKL 538 +RRAY LR D EI VHLGEVLW G++ +A++ WR+ K+P N+ LK+TL+RL VKL Sbjct: 539 LRRAYALRQDAEIAVHLGEVLWVRGEKVDAQRFWRDARSKDPKNDSLKNTLTRLQVKL 596