BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5069.p (273 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777296.1| formamidopyrimidine-DNA glycosylase [Herbasp... 515 e-144 ref|YP_001354814.1| formamidopyrimidine-DNA glycosylase [Janthin... 459 e-127 ref|YP_001101124.1| formamidopyrimidine-DNA glycosylase [Hermini... 447 e-124 ref|ZP_08273347.1| Formamidopyrimidine-DNA glycosylase [Oxalobac... 429 e-118 ref|YP_004751274.1| formamidopyrimidine-DNA glycosylase [Collimo... 409 e-112 >ref|YP_003777296.1| formamidopyrimidine-DNA glycosylase [Herbaspirillum seropedicae SmR1] gb|ADJ65388.1| formamidopyrimidine-DNA glycosylase protein [Herbaspirillum seropedicae SmR1] Length = 273 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 254/273 (93%), Positives = 262/273 (95%) Query: 1 MPELPEVEVTRRGVAPHLEGRTVSGVVLRHTGLRWPFPEGLHTLLAGRVIRSTGRRGKYL 60 MPELPEVEVTRRGVAPHLEGRTVSGVV+RH+GLRWPFP GL LL GRVIRSTGRRGKYL Sbjct: 1 MPELPEVEVTRRGVAPHLEGRTVSGVVMRHSGLRWPFPVGLEALLRGRVIRSTGRRGKYL 60 Query: 61 LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDLA 120 LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDLA Sbjct: 61 LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDLA 120 Query: 121 DGDIEEHLLLRSLGLEPLEDKFSARELFNQTRGRSAPIKQVLLAGDIVVGVGNIYASESL 180 DG +EEHLLLRSLGLEPLE+KF+ARELF QTRGRSAPIKQVLLAGDIVVGVGNIYASESL Sbjct: 121 DGAVEEHLLLRSLGLEPLEEKFTARELFRQTRGRSAPIKQVLLAGDIVVGVGNIYASESL 180 Query: 181 FKARINPKTPAYKISLARYERLAEAIRETLAAAIEQGGSTLRDFIAVNGQSGYFQQNYFV 240 FKARI+PKT A KISL RYERLA+AIRETLAAAIEQGGS+LRDFIAVNGQSGYFQQNYFV Sbjct: 181 FKARIHPKTAAGKISLPRYERLAQAIRETLAAAIEQGGSSLRDFIAVNGQSGYFQQNYFV 240 Query: 241 YNRTGEPCRICAAPIRQIKQGQRSTFYCVSCQK 273 YNRTGE CRICA PIRQIKQGQRSTFYCVSCQK Sbjct: 241 YNRTGEACRICATPIRQIKQGQRSTFYCVSCQK 273 >ref|YP_001354814.1| formamidopyrimidine-DNA glycosylase [Janthinobacterium sp. Marseille] sp|A6T2R7|FPG_JANMA RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM gb|ABR88402.1| formamidopyrimidine-DNA glycosylase [Janthinobacterium sp. Marseille] Length = 273 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 218/273 (79%), Positives = 241/273 (88%) Query: 1 MPELPEVEVTRRGVAPHLEGRTVSGVVLRHTGLRWPFPEGLHTLLAGRVIRSTGRRGKYL 60 MPELPEVEVTRRGVAPHLEG+ ++GV LRHTGLRWPFP L LAGR +RSTGRRGKYL Sbjct: 1 MPELPEVEVTRRGVAPHLEGQVITGVALRHTGLRWPFPATLSQTLAGRTVRSTGRRGKYL 60 Query: 61 LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDLA 120 LIHFDHGTLI+HLGMSGHLRILP + P+KHDHFDLE+G Q++R+TDPRRFGA+LWH Sbjct: 61 LIHFDHGTLIIHLGMSGHLRILPSDVPPKKHDHFDLEIGPQLLRLTDPRRFGAVLWHAAE 120 Query: 121 DGDIEEHLLLRSLGLEPLEDKFSARELFNQTRGRSAPIKQVLLAGDIVVGVGNIYASESL 180 DG IE HLLLR+LG+EPLE FSA+ L+ QTR RS+ IKQVLLAGDIVVGVGNIYASESL Sbjct: 121 DGSIENHLLLRTLGVEPLEAAFSAQWLYQQTRNRSSAIKQVLLAGDIVVGVGNIYASESL 180 Query: 181 FKARINPKTPAYKISLARYERLAEAIRETLAAAIEQGGSTLRDFIAVNGQSGYFQQNYFV 240 F+ARINPKTPA++I LARYERLAEAIR+ LAAAIEQGGSTL+DFI VNGQSGYFQQNYF Sbjct: 181 FQARINPKTPAHRIGLARYERLAEAIRQILAAAIEQGGSTLKDFIGVNGQSGYFQQNYFC 240 Query: 241 YNRTGEPCRICAAPIRQIKQGQRSTFYCVSCQK 273 Y RTGEPCRIC PIRQI QGQRSTFYC +CQK Sbjct: 241 YARTGEPCRICKTPIRQIVQGQRSTFYCPNCQK 273 >ref|YP_001101124.1| formamidopyrimidine-DNA glycosylase [Herminiimonas arsenicoxydans] sp|A4G916|FPG_HERAR RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM emb|CAL63003.1| Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) [Herminiimonas arsenicoxydans] Length = 273 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 215/273 (78%), Positives = 240/273 (87%) Query: 1 MPELPEVEVTRRGVAPHLEGRTVSGVVLRHTGLRWPFPEGLHTLLAGRVIRSTGRRGKYL 60 MPELPEVEVTRRGVAP+LEG+ VSGVVLRHTGLRWPFP L LAGR IRSTGRRGKYL Sbjct: 1 MPELPEVEVTRRGVAPYLEGQVVSGVVLRHTGLRWPFPAALSQTLAGRTIRSTGRRGKYL 60 Query: 61 LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDLA 120 LIHFDHGTLIVHLGMSGH+RILP G+ PQKHDHFD+ VG QV+R+TDPRRFGA+LWH Sbjct: 61 LIHFDHGTLIVHLGMSGHIRILPLGVPPQKHDHFDMTVGNQVLRLTDPRRFGAVLWHAAE 120 Query: 121 DGDIEEHLLLRSLGLEPLEDKFSARELFNQTRGRSAPIKQVLLAGDIVVGVGNIYASESL 180 +G +++HLLLR+LG+EPLE F+A+ L+ QTR R + IKQVLLAGDIVVGVGNIYASESL Sbjct: 121 EGAVDQHLLLRTLGVEPLEGLFTAQWLYRQTRSRRSAIKQVLLAGDIVVGVGNIYASESL 180 Query: 181 FKARINPKTPAYKISLARYERLAEAIRETLAAAIEQGGSTLRDFIAVNGQSGYFQQNYFV 240 F+A INPKT A++I L RYERLA+AIRE LAAAI QGGSTL+DFI VNGQSGYFQQNYFV Sbjct: 181 FQAGINPKTQAHRIGLQRYERLAQAIREILAAAIAQGGSTLKDFIGVNGQSGYFQQNYFV 240 Query: 241 YNRTGEPCRICAAPIRQIKQGQRSTFYCVSCQK 273 Y RTGEPCRIC AP+RQI QGQRSTFYC +CQK Sbjct: 241 YARTGEPCRICNAPVRQIVQGQRSTFYCPNCQK 273 >ref|ZP_08273347.1| Formamidopyrimidine-DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33179.1| Formamidopyrimidine-DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] Length = 316 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 205/273 (75%), Positives = 233/273 (85%) Query: 1 MPELPEVEVTRRGVAPHLEGRTVSGVVLRHTGLRWPFPEGLHTLLAGRVIRSTGRRGKYL 60 MPELPEVEVTR G+APHL+GRTV+ VVLR +GLRWPFP L LAGR +RSTGRRGKYL Sbjct: 44 MPELPEVEVTRMGIAPHLDGRTVADVVLRRSGLRWPFPPDLAVTLAGRTVRSTGRRGKYL 103 Query: 61 LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDLA 120 LI FDHGTL++HLGMSGHLRILP +KHDHFDL VG Q+MR+TDPRRFGA+LWH Sbjct: 104 LIGFDHGTLLIHLGMSGHLRILPLSTPSEKHDHFDLVVGDQLMRLTDPRRFGAVLWHAQE 163 Query: 121 DGDIEEHLLLRSLGLEPLEDKFSARELFNQTRGRSAPIKQVLLAGDIVVGVGNIYASESL 180 DG +E H+LLR LG+EPL A+ LF+QTRGRSA IKQVLLAGD+VVGVGNIYASESL Sbjct: 164 DGPLEHHVLLRGLGIEPLGATLLAQTLFHQTRGRSAAIKQVLLAGDVVVGVGNIYASESL 223 Query: 181 FKARINPKTPAYKISLARYERLAEAIRETLAAAIEQGGSTLRDFIAVNGQSGYFQQNYFV 240 F+ARINPKTPA +I+LARYERLA I++TL+AAI QGGSTLRDF+ NGQSGYFQQ+YFV Sbjct: 224 FRARINPKTPAGRIALARYERLASEIQDTLSAAIAQGGSTLRDFVGANGQSGYFQQSYFV 283 Query: 241 YNRTGEPCRICAAPIRQIKQGQRSTFYCVSCQK 273 Y+RTGEPCR+C +RQIKQGQRSTFYCV CQK Sbjct: 284 YDRTGEPCRVCGLAVRQIKQGQRSTFYCVHCQK 316 >ref|YP_004751274.1| formamidopyrimidine-DNA glycosylase [Collimonas fungivorans Ter331] gb|AEK60451.1| Formamidopyrimidine-DNA glycosylase [Collimonas fungivorans Ter331] Length = 300 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 206/273 (75%), Positives = 232/273 (84%) Query: 1 MPELPEVEVTRRGVAPHLEGRTVSGVVLRHTGLRWPFPEGLHTLLAGRVIRSTGRRGKYL 60 MPELPEVEVTRRGVAPHL+GR V+ V RH GLRWPFP L LL GR +R TGRRGKYL Sbjct: 28 MPELPEVEVTRRGVAPHLDGRIVTAVTFRHRGLRWPFPLELPALLVGREVRGTGRRGKYL 87 Query: 61 LIHFDHGTLIVHLGMSGHLRILPPGIAPQKHDHFDLEVGGQVMRMTDPRRFGAILWHDLA 120 L+ FDHGT+I+HLGMSGHLRIL G+ PQKHDHFDL VG +++R+TDPRRFGA+LWH A Sbjct: 88 LLRFDHGTVIIHLGMSGHLRILELGVEPQKHDHFDLVVGRRLLRLTDPRRFGAVLWHADA 147 Query: 121 DGDIEEHLLLRSLGLEPLEDKFSARELFNQTRGRSAPIKQVLLAGDIVVGVGNIYASESL 180 DG +E+H+LL LGLEPLED FSA+ L+ +TR RSAPIKQVLLAGDIVVGVGNIYASESL Sbjct: 148 DGPLEQHVLLAGLGLEPLEDVFSAQILYQKTRNRSAPIKQVLLAGDIVVGVGNIYASESL 207 Query: 181 FKARINPKTPAYKISLARYERLAEAIRETLAAAIEQGGSTLRDFIAVNGQSGYFQQNYFV 240 F+A INPKTPA++ISLARYERL +AIR LAAAIE+GGSTLRDFI +GQSGYFQQ+YFV Sbjct: 208 FRAGINPKTPAHRISLARYERLVDAIRIILAAAIEKGGSTLRDFIGADGQSGYFQQSYFV 267 Query: 241 YNRTGEPCRICAAPIRQIKQGQRSTFYCVSCQK 273 Y+R G PCR C A I QIKQGQRSTFYC CQK Sbjct: 268 YDRAGLPCRNCGALITQIKQGQRSTFYCKKCQK 300