BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5067.p (294 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777294.1| P-loop-containing kinase [Herbaspirillum ser... 508 e-142 ref|YP_004751278.1| hypothetical protein CFU_0619 [Collimonas fu... 426 e-117 ref|ZP_08273352.1| Hypothetical ATP-binding protein (contains P-... 397 e-108 ref|YP_001354810.1| hypothetical protein mma_3120 [Janthinobacte... 386 e-105 ref|YP_001101120.1| hypothetical protein HEAR2885 [Herminiimonas... 383 e-104 >ref|YP_003777294.1| P-loop-containing kinase [Herbaspirillum seropedicae SmR1] gb|ADJ65386.1| P-loop-containing kinase protein [Herbaspirillum seropedicae SmR1] Length = 300 Score = 508 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 258/288 (89%), Positives = 269/288 (93%), Gaps = 1/288 (0%) Query: 7 MRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRIKEGASMLAVATDARS 66 MRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRI+EGAS LAVATDARS Sbjct: 1 MRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRIQEGASRLAVATDARS 60 Query: 67 ADSLATLRTDIEQLRADGHDVKVFFLTASDETLITRFSETRRSHPLSHRLLPGRPTSSDR 126 ADSLATLR DI+QLRADGHDVKVFFLTAS ETLITRFSETRRSHPLSHRLLPG SDR Sbjct: 61 ADSLATLRHDIDQLRADGHDVKVFFLTASSETLITRFSETRRSHPLSHRLLPG-GNPSDR 119 Query: 127 LTLTECIALEKDMLGDLQDIGLVMDTSQLSSNKLRRWVKDLVDLERSPLTLLIESFGFKH 186 LTL+ECI LEK+ML D+Q+IGLVMDTSQLSSNKLR W+KDLVDLERSPLTLLIESF FKH Sbjct: 120 LTLSECIELEKEMLADMQEIGLVMDTSQLSSNKLRGWIKDLVDLERSPLTLLIESFAFKH 179 Query: 187 GLPLDADLVFDVRMLPNPHYDAELRPLTGRDAPVIEFLVAYPEVAEMYNDIRGFVEKWLP 246 GLPLDADLVFDVRMLPNPHYD LRPLTGRD PVI+FL A EVAEM+NDIR FVEKWLP Sbjct: 180 GLPLDADLVFDVRMLPNPHYDLALRPLTGRDQPVIDFLDADAEVAEMFNDIRRFVEKWLP 239 Query: 247 SFKNDNRSYLTVAIGCTGGQHRSVYLAEQLASHFRATEQVVCRHRQLN 294 SFK DNRSYLTVAIGCTGGQHRSVYLAE+LASHFRATEQVVCRHRQL+ Sbjct: 240 SFKGDNRSYLTVAIGCTGGQHRSVYLAERLASHFRATEQVVCRHRQLD 287 >ref|YP_004751278.1| hypothetical protein CFU_0619 [Collimonas fungivorans Ter331] gb|AEK60455.1| Hypothetical ATP-binding protein UPF0042, contains P-loop [Collimonas fungivorans Ter331] Length = 293 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 211/287 (73%), Positives = 246/287 (85%), Gaps = 1/287 (0%) Query: 7 MRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRIKEGASMLAVATDARS 66 MRI+LITGISGSGKSVAL VLEDAGYFCVDNLPP LL LV TR+ EGA MLAVATDARS Sbjct: 1 MRIILITGISGSGKSVALRVLEDAGYFCVDNLPPILLRGLVATRLDEGAQMLAVATDARS 60 Query: 67 ADSLATLRTDIEQLRADGHDVKVFFLTASDETLITRFSETRRSHPLSHRLLPGRPTSSDR 126 ADSLA L +DI+QL+A+GHDVKVFFLTA E+LI RFSETRRSHPLSHRL PG+ +DR Sbjct: 61 ADSLAGLPSDIQQLKAEGHDVKVFFLTAQTESLIARFSETRRSHPLSHRLRPGQ-NPADR 119 Query: 127 LTLTECIALEKDMLGDLQDIGLVMDTSQLSSNKLRRWVKDLVDLERSPLTLLIESFGFKH 186 LTLTECI E++ML +++ IG +DTS +S+N+LR W+K+LVD E +PLTLL ESF FK Sbjct: 120 LTLTECILNEREMLAEIESIGHTIDTSNMSANRLRSWIKELVDTEPAPLTLLFESFAFKR 179 Query: 187 GLPLDADLVFDVRMLPNPHYDAELRPLTGRDAPVIEFLVAYPEVAEMYNDIRGFVEKWLP 246 G+PLDADLVFDVRMLPNPHYDA+LRPLTG D PVI+FL A P+V ++ DIR FVEKWLP Sbjct: 180 GVPLDADLVFDVRMLPNPHYDAKLRPLTGCDQPVIDFLEALPKVGDLLGDIRNFVEKWLP 239 Query: 247 SFKNDNRSYLTVAIGCTGGQHRSVYLAEQLASHFRATEQVVCRHRQL 293 SFK+DNRSYLTVAIGCTGGQHRSVY+ E+LA +F+ +E+VV RHR+L Sbjct: 240 SFKDDNRSYLTVAIGCTGGQHRSVYMVERLAEYFQVSERVVRRHREL 286 >ref|ZP_08273352.1| Hypothetical ATP-binding protein (contains P-loop) [Oxalobacteraceae bacterium IMCC9480] gb|EGF33184.1| Hypothetical ATP-binding protein (contains P-loop) [Oxalobacteraceae bacterium IMCC9480] Length = 291 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 200/289 (69%), Positives = 235/289 (81%), Gaps = 1/289 (0%) Query: 6 AMRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRIKEGASMLAVATDAR 65 AMRI+LITGISGSGKSV L+ LEDAGYFCVDNLPP+LL LV TR+++ LAVA DAR Sbjct: 4 AMRIILITGISGSGKSVGLNALEDAGYFCVDNLPPTLLRALVATRMQDHGETLAVAMDAR 63 Query: 66 SADSLATLRTDIEQLRADGHDVKVFFLTASDETLITRFSETRRSHPLSHRLLPGRPTSSD 125 SADSLA L DI +L+ +GHDVKV FL+A E+LI RFSETRRSHPLSHRL + + D Sbjct: 64 SADSLAGLPADIRRLKDEGHDVKVLFLSAKTESLIARFSETRRSHPLSHRLRADQ-SPDD 122 Query: 126 RLTLTECIALEKDMLGDLQDIGLVMDTSQLSSNKLRRWVKDLVDLERSPLTLLIESFGFK 185 R TLTECI E++ML ++ IG V+DTS +S+NKLR W+K+LV+ +R+PLTLL ESF FK Sbjct: 123 RPTLTECILREREMLVTIEGIGHVIDTSGVSANKLRSWIKELVETDRTPLTLLFESFAFK 182 Query: 186 HGLPLDADLVFDVRMLPNPHYDAELRPLTGRDAPVIEFLVAYPEVAEMYNDIRGFVEKWL 245 G+PLDADLVFDVR+LPNPHYDA LR L GRD PVI FL A PE AE+ DIR FVEKWL Sbjct: 183 FGVPLDADLVFDVRVLPNPHYDAALRALNGRDQPVIAFLDALPEAAELMTDIRHFVEKWL 242 Query: 246 PSFKNDNRSYLTVAIGCTGGQHRSVYLAEQLASHFRATEQVVCRHRQLN 294 PSFK DNRSYLTVAIGCTGGQHRSVY+ E LA++FRA E+VV RHR+++ Sbjct: 243 PSFKADNRSYLTVAIGCTGGQHRSVYIVEHLAAYFRANERVVLRHREMD 291 >ref|YP_001354810.1| hypothetical protein mma_3120 [Janthinobacterium sp. Marseille] sp|A6T2R3|Y3120_JANMA RecName: Full=UPF0042 nucleotide-binding protein mma_3120 gb|ABR89444.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 287 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 194/288 (67%), Positives = 227/288 (78%), Gaps = 1/288 (0%) Query: 7 MRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRIKEGASMLAVATDARS 66 MRI+LITGISGSGKSV L LEDAGYFCVDNLPP+LL LV TR +E A LAVA DARS Sbjct: 1 MRIILITGISGSGKSVGLTSLEDAGYFCVDNLPPTLLRALVATRQEEHADKLAVAMDARS 60 Query: 67 ADSLATLRTDIEQLRADGHDVKVFFLTASDETLITRFSETRRSHPLSHRLLPGRPTSSDR 126 A SL L DI L++ GH+VKV FLTA ++LI RFSETRRSHPLSHR + DR Sbjct: 61 ASSLIGLPADIAWLQSQGHEVKVLFLTAKTDSLIARFSETRRSHPLSHRGF-SSTAAEDR 119 Query: 127 LTLTECIALEKDMLGDLQDIGLVMDTSQLSSNKLRRWVKDLVDLERSPLTLLIESFGFKH 186 TLTECI E++ML +++I V+DTS +S+NKLR W+K L++ + SPLT+L ESF FK Sbjct: 120 RTLTECIREEREMLSGVEEISHVIDTSGMSANKLRGWIKALIESDHSPLTVLFESFAFKF 179 Query: 187 GLPLDADLVFDVRMLPNPHYDAELRPLTGRDAPVIEFLVAYPEVAEMYNDIRGFVEKWLP 246 G+PLDADLVFDVRMLPNPHYD++LRPLTGRDAPV FL P+ + DIRGFVEKWLP Sbjct: 180 GVPLDADLVFDVRMLPNPHYDSQLRPLTGRDAPVQAFLQDQPDATALLADIRGFVEKWLP 239 Query: 247 SFKNDNRSYLTVAIGCTGGQHRSVYLAEQLASHFRATEQVVCRHRQLN 294 +FK DNRSYLTVAIGCTGGQHRSVY+ EQLA+HFRA E V+ RHR+L+ Sbjct: 240 AFKKDNRSYLTVAIGCTGGQHRSVYMVEQLAAHFRAHEHVILRHRELD 287 >ref|YP_001101120.1| hypothetical protein HEAR2885 [Herminiimonas arsenicoxydans] sp|A4G912|Y2885_HERAR RecName: Full=UPF0042 nucleotide-binding protein HEAR2885 emb|CAL62999.1| Conserved hypothetical protein, putative ATPase [Herminiimonas arsenicoxydans] Length = 287 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 190/288 (65%), Positives = 224/288 (77%), Gaps = 1/288 (0%) Query: 7 MRIVLITGISGSGKSVALHVLEDAGYFCVDNLPPSLLCDLVQTRIKEGASMLAVATDARS 66 MRI+LITGISGSGKSV L LEDAGYFCVDNLPP+LL LV R++E + LAV+ D RS Sbjct: 1 MRIILITGISGSGKSVGLKALEDAGYFCVDNLPPTLLRALVTERLEEHGTTLAVSMDVRS 60 Query: 67 ADSLATLRTDIEQLRADGHDVKVFFLTASDETLITRFSETRRSHPLSHRLLPGRPTSSDR 126 A SL L D+ LR+ GHDVKV FLTA ++LI RFSETRRSHPLSHR T+ +R Sbjct: 61 ASSLIGLPADLAWLRSQGHDVKVLFLTAKTDSLIARFSETRRSHPLSHRGFASDSTA-ER 119 Query: 127 LTLTECIALEKDMLGDLQDIGLVMDTSQLSSNKLRRWVKDLVDLERSPLTLLIESFGFKH 186 TLTECI E++ML +++IG V+DTS + +NKLR W+K LV+ + SPLT+L ESF FK Sbjct: 120 RTLTECIHEEREMLAGIEEIGHVIDTSGMRANKLRAWIKGLVESDHSPLTILFESFAFKF 179 Query: 187 GLPLDADLVFDVRMLPNPHYDAELRPLTGRDAPVIEFLVAYPEVAEMYNDIRGFVEKWLP 246 G+PLDADLVFDVR LPNPHYD LRPLTGRDAPV +FL P+ + DIRGFVEKWLP Sbjct: 180 GVPLDADLVFDVRTLPNPHYDEALRPLTGRDAPVQDFLQTQPDATALLADIRGFVEKWLP 239 Query: 247 SFKNDNRSYLTVAIGCTGGQHRSVYLAEQLASHFRATEQVVCRHRQLN 294 +FKNDNR YLTVAIGCTGGQHRSVY+ EQLA +FR TE V+ RHR+L+ Sbjct: 240 AFKNDNRGYLTVAIGCTGGQHRSVYIVEQLAQYFRPTEHVLVRHRELD 287