BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5065.p (160 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777292.1| nitrogen regulatory IIA (Enzyme IIA-NTR) (Ph... 294 3e-78 ref|YP_004751280.1| PTS system nitrogen-specific IIA component, ... 249 9e-65 ref|ZP_08275036.1| PTS system nitrogen-specific IIA component, P... 246 6e-64 ref|YP_001354808.1| PTS system, nitrogen regulatory IIA componen... 245 1e-63 ref|YP_001101118.1| PTS system nitrogen regulatory IIA protein [... 243 6e-63 >ref|YP_003777292.1| nitrogen regulatory IIA (Enzyme IIA-NTR) (Phosphotransferase enzyme II, A component) transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65384.1| nitrogen regulatory IIA (Enzyme IIA-NTR) (Phosphotransferase enzyme II, A component) transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 157 Score = 294 bits (752), Expect = 3e-78, Method: Composition-based stats. Identities = 154/157 (98%), Positives = 155/157 (98%) Query: 4 MTNLAKILSPENVVLDLEVSSKKRAFEQAGLTFENNSGIARSTVSENLFARERLGSTGLG 63 MTNLAKILSPENVVLDLEVSSKKRAFEQAGLTFENNSGIARSTVSENLFARERLGSTGLG Sbjct: 1 MTNLAKILSPENVVLDLEVSSKKRAFEQAGLTFENNSGIARSTVSENLFARERLGSTGLG 60 Query: 64 HGVAVPHGRIKGLKAPLALFMRLAAPIPFESPDGQPVKLLVFLLIPDNVTQQHLEILSEI 123 HGVAVPHGRIKGLKAPLALFMRLAAPIPFESPDGQPVKLLVFLLIPD+VTQQHLEILSEI Sbjct: 61 HGVAVPHGRIKGLKAPLALFMRLAAPIPFESPDGQPVKLLVFLLIPDHVTQQHLEILSEI 120 Query: 124 AEMFSDDAFRNELTVESDPAVVHARIVTWQTSMEKAG 160 AEMFSDDAFRNELT E DPAVVHARIVTWQTSMEKAG Sbjct: 121 AEMFSDDAFRNELTHEPDPAVVHARIVTWQTSMEKAG 157 >ref|YP_004751280.1| PTS system nitrogen-specific IIA component, PtsN [Collimonas fungivorans Ter331] gb|AEK60457.1| PTS system nitrogen-specific IIA component, PtsN [Collimonas fungivorans Ter331] Length = 166 Score = 249 bits (636), Expect = 9e-65, Method: Composition-based stats. Identities = 127/153 (83%), Positives = 136/153 (88%) Query: 1 MSVMTNLAKILSPENVVLDLEVSSKKRAFEQAGLTFENNSGIARSTVSENLFARERLGST 60 + +MTNLAKIL +NV LDLEVSSKKRAFEQAGL FENN GIARSTVS+NLFARERLGST Sbjct: 6 ICIMTNLAKILPAQNVALDLEVSSKKRAFEQAGLLFENNCGIARSTVSDNLFARERLGST 65 Query: 61 GLGHGVAVPHGRIKGLKAPLALFMRLAAPIPFESPDGQPVKLLVFLLIPDNVTQQHLEIL 120 GLGHGVAVPHGR+KGLKAPLA F+RLA PIPFESPDG+PV LLVFLLIPDNVTQQHLEIL Sbjct: 66 GLGHGVAVPHGRVKGLKAPLAAFVRLAEPIPFESPDGEPVSLLVFLLIPDNVTQQHLEIL 125 Query: 121 SEIAEMFSDDAFRNELTVESDPAVVHARIVTWQ 153 SEIAEMFS DAFR L+ + DPA VHA IV WQ Sbjct: 126 SEIAEMFSSDAFRALLSSDPDPASVHAHIVAWQ 158 >ref|ZP_08275036.1| PTS system nitrogen-specific IIA component, PtsN [Oxalobacteraceae bacterium IMCC9480] gb|EGF31492.1| PTS system nitrogen-specific IIA component, PtsN [Oxalobacteraceae bacterium IMCC9480] Length = 157 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 125/157 (79%), Positives = 136/157 (86%) Query: 4 MTNLAKILSPENVVLDLEVSSKKRAFEQAGLTFENNSGIARSTVSENLFARERLGSTGLG 63 MTNLAKIL+P+NVVL LEVSSKKRAFEQAGL FENN GIARS+VSENLFARERLGSTGLG Sbjct: 1 MTNLAKILTPDNVVLGLEVSSKKRAFEQAGLIFENNCGIARSSVSENLFARERLGSTGLG 60 Query: 64 HGVAVPHGRIKGLKAPLALFMRLAAPIPFESPDGQPVKLLVFLLIPDNVTQQHLEILSEI 123 HGVAVPHGRIKGLKAPLA F+RL+ IPFESPDG PV LLVFLLIPD+VTQQHLEILSEI Sbjct: 61 HGVAVPHGRIKGLKAPLAAFVRLSEAIPFESPDGLPVSLLVFLLIPDHVTQQHLEILSEI 120 Query: 124 AEMFSDDAFRNELTVESDPAVVHARIVTWQTSMEKAG 160 AEMFSDD FR+ L + DP VH R++ WQ S+ G Sbjct: 121 AEMFSDDVFRSMLATDPDPISVHTRLIAWQGSLHDLG 157 >ref|YP_001354808.1| PTS system, nitrogen regulatory IIA component [Janthinobacterium sp. Marseille] gb|ABR90281.1| PTS system, nitrogen regulatory IIA component [Janthinobacterium sp. Marseille] Length = 157 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 122/154 (79%), Positives = 136/154 (88%) Query: 4 MTNLAKILSPENVVLDLEVSSKKRAFEQAGLTFENNSGIARSTVSENLFARERLGSTGLG 63 M +L++IL P NVVLDL+VSSKKR FEQ GL FENN GIARS VS+NLFARERLGSTGLG Sbjct: 1 MNHLSQILPPANVVLDLDVSSKKRTFEQVGLIFENNCGIARSVVSDNLFARERLGSTGLG 60 Query: 64 HGVAVPHGRIKGLKAPLALFMRLAAPIPFESPDGQPVKLLVFLLIPDNVTQQHLEILSEI 123 HGVAVPHGRIKGLKAPLA F+RLA PIPFESPDGQPV LL+FLLIPD+VTQQHLEILSE+ Sbjct: 61 HGVAVPHGRIKGLKAPLAAFVRLAQPIPFESPDGQPVNLLIFLLIPDHVTQQHLEILSEL 120 Query: 124 AEMFSDDAFRNELTVESDPAVVHARIVTWQTSME 157 AEMFSD+AFRN L DPA VHAR++TWQ S++ Sbjct: 121 AEMFSDEAFRNLLASTEDPAAVHARLITWQPSLQ 154 >ref|YP_001101118.1| PTS system nitrogen regulatory IIA protein [Herminiimonas arsenicoxydans] emb|CAL62997.1| putative PTS IIA-like nitrogen-regulatory protein PtsN [Herminiimonas arsenicoxydans] Length = 157 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 122/156 (78%), Positives = 136/156 (87%) Query: 4 MTNLAKILSPENVVLDLEVSSKKRAFEQAGLTFENNSGIARSTVSENLFARERLGSTGLG 63 M +L++IL P NVVLDL+VSSKKR FEQ GL FENN GIARS VSENLFARERLGSTGLG Sbjct: 1 MNHLSQILPPANVVLDLDVSSKKRTFEQVGLIFENNCGIARSVVSENLFARERLGSTGLG 60 Query: 64 HGVAVPHGRIKGLKAPLALFMRLAAPIPFESPDGQPVKLLVFLLIPDNVTQQHLEILSEI 123 HGVAVPHGRIKGLKAPLA F+RLA PIPFESPDGQPV LL+FLLIPDNVTQQHLEILSE+ Sbjct: 61 HGVAVPHGRIKGLKAPLAAFVRLAQPIPFESPDGQPVSLLIFLLIPDNVTQQHLEILSEL 120 Query: 124 AEMFSDDAFRNELTVESDPAVVHARIVTWQTSMEKA 159 AEMFSD+AFR L+ D A VHAR++TWQ S++ + Sbjct: 121 AEMFSDEAFRTLLSTTEDAAAVHARLITWQPSLQSS 156