BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5062.p         (190 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777290.1| hypothetical protein Hsero_3909 [Herbaspiril...   212   2e-53
ref|YP_004751282.1| NADPH dependent preQ0 reductase [Collimonas ...   172   2e-41
ref|YP_001354807.1| 7-cyano-7-deazaguanine reductase [Janthinoba...   171   6e-41
ref|YP_001101097.1| 7-cyano-7-deazaguanine reductase [Herminiimo...   162   3e-38
ref|YP_582508.1| 7-cyano-7-deazaguanine reductase [Cupriavidus m...   161   5e-38

>ref|YP_003777290.1| hypothetical protein Hsero_3909 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65382.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 291

 Score =  212 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 107/124 (86%), Positives = 112/124 (90%)

Query: 1   MDHTNPPASTVGHSPESSPLGKSSEYPTHYDPSLLFPIPRAPKRAELQISGTLPFFGVDL 60
           MDHTNP AS   HSPESSPLGKSS+YPTHYDPSLLFPIPRAPKRAELQISGTLPFFGVDL
Sbjct: 1   MDHTNPSASPASHSPESSPLGKSSQYPTHYDPSLLFPIPRAPKRAELQISGTLPFFGVDL 60

Query: 61  WTAYEISWLNLRGKPQIAIATFMVPADSPDIIESKSFKLYLNSFNQTRLEDQQALVALLQ 120
           WTAYEISWLNLRGKPQIAIATFMVPADSP+IIESKSFKLYLNSFNQ RLE    L+  ++
Sbjct: 61  WTAYEISWLNLRGKPQIAIATFMVPADSPNIIESKSFKLYLNSFNQERLESADQLIDKMR 120

Query: 121 KDLS 124
            DLS
Sbjct: 121 TDLS 124


>ref|YP_004751282.1| NADPH dependent preQ0 reductase [Collimonas fungivorans Ter331]
 gb|AEK60459.1| NADPH dependent preQ0 reductase [Collimonas fungivorans Ter331]
          Length = 279

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/120 (70%), Positives = 100/120 (83%)

Query: 10  TVGHSPESSPLGKSSEYPTHYDPSLLFPIPRAPKRAELQISGTLPFFGVDLWTAYEISWL 69
           T+ ++P++SPLGK + Y + Y PSLLFPI R  KR E+ ISGTLPFFGVD+W AYE+SWL
Sbjct: 2   TIPNTPDASPLGKPAAYQSQYQPSLLFPIARLGKREEIGISGTLPFFGVDIWNAYEVSWL 61

Query: 70  NLRGKPQIAIATFMVPADSPDIIESKSFKLYLNSFNQTRLEDQQALVALLQKDLSAAAAA 129
           NLRGKPQ+AIATF VPADSP+IIESKSFKLYLNSFNQTRL D+ AL+ LL+ D+SA   A
Sbjct: 62  NLRGKPQVAIATFTVPADSPNIIESKSFKLYLNSFNQTRLADKDALLQLLRTDISAGFGA 121


>ref|YP_001354807.1| 7-cyano-7-deazaguanine reductase [Janthinobacterium sp. Marseille]
 gb|ABR90025.1| GTP cyclohydrolase I [Janthinobacterium sp. Marseille]
          Length = 279

 Score =  171 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 93/158 (58%), Positives = 110/158 (69%), Gaps = 10/158 (6%)

Query: 10  TVGHSPESSPLGKSSEYPTHYDPSLLFPIPRAPKRAELQISGTLPFFGVDLWTAYEISWL 69
           T+  SP++SPLGK S Y T YDPSLLFPIPR  KR EL +SG LPFFGVD+W AYE+SWL
Sbjct: 2   TMPSSPDASPLGKPSVYQTQYDPSLLFPIPRQGKRDELGLSGDLPFFGVDIWNAYELSWL 61

Query: 70  NLRGKPQIAIATFMVPADSPDIIESKSFKLYLNSFNQTRLEDQQALVALLQKDLSAAAAA 129
           N+RGKPQ+AIA  MVPADSP+I+ESKSFKLYLNSFNQT+L    AL+ LL+ DLSA   A
Sbjct: 62  NMRGKPQVAIARIMVPADSPNIVESKSFKLYLNSFNQTKLGGTDALLELLRADLSAGFGA 121

Query: 130 ----------DQDRRRPGESDGDHLDRQAVRSAEVLLD 157
                     D  +   GE DG  LDR  +   + + D
Sbjct: 122 PVQITLTLPEDFVKINIGELDGMLLDRLDIEVTDYVPD 159


>ref|YP_001101097.1| 7-cyano-7-deazaguanine reductase [Herminiimonas arsenicoxydans]
 emb|CAL62976.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (NADPH-dependent
           nitrile oxidoreductase) [Herminiimonas arsenicoxydans]
          Length = 279

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 78/120 (65%), Positives = 94/120 (78%)

Query: 10  TVGHSPESSPLGKSSEYPTHYDPSLLFPIPRAPKRAELQISGTLPFFGVDLWTAYEISWL 69
           T    P+ SPLGK + Y  HYDPSLLF IPR  KR E+ +SGTLPFFGVD+W AYEISWL
Sbjct: 2   TTPFKPDGSPLGKPTAYEAHYDPSLLFSIPRQYKRDEIGLSGTLPFFGVDIWNAYEISWL 61

Query: 70  NLRGKPQIAIATFMVPADSPDIIESKSFKLYLNSFNQTRLEDQQALVALLQKDLSAAAAA 129
           N+RGKPQ+A+A   VPADSP+I+ESKSFKLYLNS NQT+L   +AL+ LL++DLS+   A
Sbjct: 62  NMRGKPQVAMARVTVPADSPNIVESKSFKLYLNSLNQTKLGGTEALLELLREDLSSGFGA 121


>ref|YP_582508.1| 7-cyano-7-deazaguanine reductase [Cupriavidus metallidurans CH34]
 sp|Q1LRI7|QUEF_RALME RecName: Full=NADPH-dependent 7-cyano-7-deazaguanine reductase;
           AltName: Full=7-cyano-7-carbaguanine reductase; AltName:
           Full=NADPH-dependent nitrile oxidoreductase; AltName:
           Full=PreQ(0) reductase
 gb|ABF07239.1| NADPH-dependent 7-cyano-7-deazaguanine reductase (NADPH- dependent
           nitrile oxidoreductase) [Cupriavidus metallidurans CH34]
          Length = 277

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 80/128 (62%), Positives = 96/128 (75%), Gaps = 2/128 (1%)

Query: 15  PESSPLGKSSEYPTHYDPSLLFPIPRAPKRAELQI--SGTLPFFGVDLWTAYEISWLNLR 72
           PE SPLGK S Y T YD SLLFPIPR PKRAE+ +     LPFFGVD+W AYE+SWLNL+
Sbjct: 4   PEHSPLGKPSAYKTEYDASLLFPIPRQPKRAEIGLPEGRALPFFGVDIWNAYEVSWLNLK 63

Query: 73  GKPQIAIATFMVPADSPDIIESKSFKLYLNSFNQTRLEDQQALVALLQKDLSAAAAADQD 132
           GKPQ+A+ATF++PAD+P+I+ESKSFKLYLNSFNQT++   +AL  LL  DLS A      
Sbjct: 64  GKPQVALATFIIPADTPNIVESKSFKLYLNSFNQTKIASPEALQQLLHHDLSEATGGTVQ 123

Query: 133 RRRPGESD 140
            R   E+D
Sbjct: 124 VRLVTEAD 131