BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5050.p (425 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773456.1| membrane protein [Herbaspirillum seropedicae... 599 e-169 ref|YP_001889107.1| hypothetical protein Bphyt_5378 [Burkholderi... 459 e-127 ref|YP_004230168.1| hypothetical protein BC1001_3696 [Burkholder... 455 e-126 ref|YP_003908976.1| hypothetical protein BC1003_3745 [Burkholder... 455 e-126 ref|ZP_02881642.1| protein of unknown function DUF445 [Burkholde... 454 e-125 >ref|YP_003773456.1| membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ61548.1| membrane protein [Herbaspirillum seropedicae SmR1] Length = 425 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 339/425 (79%), Positives = 378/425 (88%) Query: 1 MDKQQALRRTKRLALGCLLGSAALFVAASLAAPSTWSALLRAMAEAAMVGALADWFAVTA 60 MDKQ ALRRTKRLA CLL +AALF+ ASLA PS WS LLRAMAEAAMVGALADWFAV+A Sbjct: 1 MDKQDALRRTKRLAFICLLAAAALFIIASLAPPSWWSGLLRAMAEAAMVGALADWFAVSA 60 Query: 61 LFRRVPLPFLARHTAIIPRNKDRIADNLAVFVEEKFLSPQSLAGLVRRHDPAQRLSAWMA 120 LFRR+PLP L+RHT II RNK+RIA NLAVFVEEKFLSPQSLA L+RRHDPAQ L+ WMA Sbjct: 61 LFRRIPLPLLSRHTDIIARNKERIAHNLAVFVEEKFLSPQSLAALIRRHDPAQHLARWMA 120 Query: 121 APENAARLGGYMVQAVGGVLTLTDDRRIQAFVREALQTALGKLDLSRSLASILDTLTLDG 180 PENAARLGGYM +AVGGVL LTDDRRIQ+F+R+ L A+GKLDLS SLA++LDTLTLDG Sbjct: 121 LPENAARLGGYMARAVGGVLMLTDDRRIQSFLRQGLHAAVGKLDLSHSLAAVLDTLTLDG 180 Query: 181 RHQQLLDRAIVALAELLNREQTRAFIAERMVEWLQREYPKIEKLLPSNWIGEKSADTLAD 240 RHQQLLDRAI+ LA LLNREQTR FIAERMV+WL++EYPKIEK+LPS WIGEKSA TLAD Sbjct: 181 RHQQLLDRAIIELAALLNREQTRIFIAERMVDWLRQEYPKIEKILPSQWIGEKSAQTLAD 240 Query: 241 ILDKLLTGIAEDPQHSLRQAFDRQLAGFVMRLKEDPALRERAEEIKREILQGEAVNAYVG 300 ILDKLL+GIAEDPQHSLR+AFD Q+A F++RLKEDPALRERA+ KRE+L+GEAV+AYVG Sbjct: 241 ILDKLLSGIAEDPQHSLRRAFDEQVARFIVRLKEDPALRERADTFKRELLEGEAVHAYVG 300 Query: 301 SLWDSLRQWLRQDLARLDSALHAQASAATQWIGRALQEDAELRASLNAHLEQAIASLSPD 360 LWDSLRQWLR DL R DS L A ATQWIG+ALQ+DA LRASLN HLE AIASLSP+ Sbjct: 301 GLWDSLRQWLRADLERSDSVLRRHAQDATQWIGQALQDDAALRASLNTHLEHAIASLSPE 360 Query: 361 VAQLLTRHISDTIKQWDTAELSRQIELNIGRDLQYIRINGTLVGGLIGALLFGLSWLMQW 420 +AQLL+RHISDTI+QW+T ELSRQ+ELNIGRDLQ+IRINGTLVG LIGA+LFGLS LMQW Sbjct: 361 LAQLLSRHISDTIRQWETVELSRQVELNIGRDLQFIRINGTLVGALIGAVLFGLSALMQW 420 Query: 421 LVHGV 425 LVHGV Sbjct: 421 LVHGV 425 >ref|YP_001889107.1| hypothetical protein Bphyt_5378 [Burkholderia phytofirmans PsJN] gb|ACD19737.1| protein of unknown function DUF445 [Burkholderia phytofirmans PsJN] Length = 429 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 230/424 (54%), Positives = 312/424 (73%), Gaps = 3/424 (0%) Query: 1 MDKQQALRRTKRLALGCLLGSAALFVAASLAAPSTWSALLRAMAEAAMVGALADWFAVTA 60 M+K L++ KR L L+ +A +F+ + W ++A+AEAAMVGALADWFAV A Sbjct: 1 MNKAIELKKAKRTPLLLLIAAACVFLVTAFMPRGIWVDGIKAVAEAAMVGALADWFAVAA 60 Query: 61 LFRRVPLPFLARHTAIIPRNKDRIADNLAVFVEEKFLSPQSLAGLVRRHDPAQRLSAWMA 120 LFRRVP+P ++ HTAIIPRNK +IADNLAVFV++KFL SL GL+++HDPA+ ++AW+ Sbjct: 61 LFRRVPIPVVSAHTAIIPRNKHKIADNLAVFVQDKFLDVPSLVGLIQKHDPARSITAWLT 120 Query: 121 APENAARLGGYMVQAVGGVLTLTDDRRIQAFVREALQTALGKLDLSRSLASILDTLTLDG 180 PEN ARLG Y+V+ G+L LTDD RIQ F+++AL+ L K+DLS+S+ SILDTLT DG Sbjct: 121 QPENTARLGDYVVKLTSGILELTDDVRIQVFIKDALRDVLAKVDLSQSMGSILDTLTKDG 180 Query: 181 RHQQLLDRAIVALAELLNREQTRAFIAERMVEWLQREYPKIEKLLP---SNWIGEKSADT 237 RHQ+LLD I + LL R FIAER+VEW++ EYPK+EK+LP S W+G+K A+T Sbjct: 181 RHQELLDAGIEQVVALLREPHAREFIAERIVEWVKAEYPKMEKILPSTFSTWLGDKGAET 240 Query: 238 LADILDKLLTGIAEDPQHSLRQAFDRQLAGFVMRLKEDPALRERAEEIKREILQGEAVNA 297 +A+ ++++L I+E+P H LRQ FD +++LK DPA ++ EE+KR +++G+A+++ Sbjct: 241 IANAVNRILEQISENPTHQLRQKFDDAAHKLIVKLKTDPAFLQKGEELKRYLVEGDALSS 300 Query: 298 YVGSLWDSLRQWLRQDLARLDSALHAQASAATQWIGRALQEDAELRASLNAHLEQAIASL 357 YV +W LR WL++DL DSALHA+ A QW+GR L D LR SLN HLE+A ++ Sbjct: 301 YVKDMWSELRAWLKRDLQSSDSALHARVVAMGQWVGRELAHDPALRQSLNDHLEEAARTM 360 Query: 358 SPDVAQLLTRHISDTIKQWDTAELSRQIELNIGRDLQYIRINGTLVGGLIGALLFGLSWL 417 +PD A+ LTRHISDT+K WD+ E+SRQIELNIG+DLQYIRINGT+VGG IG LL+ S L Sbjct: 361 APDFARFLTRHISDTVKNWDSHEMSRQIELNIGKDLQYIRINGTIVGGFIGLLLYASSQL 420 Query: 418 MQWL 421 + L Sbjct: 421 LGLL 424 >ref|YP_004230168.1| hypothetical protein BC1001_3696 [Burkholderia sp. CCGE1001] gb|ADX57108.1| protein of unknown function DUF445 [Burkholderia sp. CCGE1001] Length = 426 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 235/421 (55%), Positives = 312/421 (74%) Query: 1 MDKQQALRRTKRLALGCLLGSAALFVAASLAAPSTWSALLRAMAEAAMVGALADWFAVTA 60 M+K LR+ KR L L + +FVA +L W ++A+AEAAMVGALADWFAV A Sbjct: 1 MNKALELRKAKRTPLLLLALAVCVFVATALMPRGVWIDGIKAVAEAAMVGALADWFAVAA 60 Query: 61 LFRRVPLPFLARHTAIIPRNKDRIADNLAVFVEEKFLSPQSLAGLVRRHDPAQRLSAWMA 120 LFRRVP+P ++ HTAIIPRNK +IADNLAVFV++KFL SL GL+R+HDPAQ ++ W+A Sbjct: 61 LFRRVPIPIVSAHTAIIPRNKYKIADNLAVFVQDKFLDVPSLVGLIRKHDPAQSITRWLA 120 Query: 121 APENAARLGGYMVQAVGGVLTLTDDRRIQAFVREALQTALGKLDLSRSLASILDTLTLDG 180 P N+ARLG Y+V+ G+L LTDD RIQ F+++AL+ LGK+DLS+S+ SILDTLT DG Sbjct: 121 EPANSARLGDYVVKLTSGMLDLTDDARIQVFIKDALRDVLGKVDLSQSMGSILDTLTKDG 180 Query: 181 RHQQLLDRAIVALAELLNREQTRAFIAERMVEWLQREYPKIEKLLPSNWIGEKSADTLAD 240 RHQ+LLD I + LL + + RAFIAER+V+W++ EYPK+EK+LPS W+GEK AD +A Sbjct: 181 RHQELLDAGIDQVLALLRQAEARAFIAERIVDWVRSEYPKMEKILPSAWLGEKGADAIAS 240 Query: 241 ILDKLLTGIAEDPQHSLRQAFDRQLAGFVMRLKEDPALRERAEEIKREILQGEAVNAYVG 300 ++++L I+E+P H LRQ FD +++LK DPA ++ EE+KR +++GEA+ +YV Sbjct: 241 AVNRMLEQISENPTHQLRQTFDDAAHKLIVKLKSDPAFLQKGEELKRYLVEGEALASYVK 300 Query: 301 SLWDSLRQWLRQDLARLDSALHAQASAATQWIGRALQEDAELRASLNAHLEQAIASLSPD 360 +W LR WL++DL DSALHA+ AA QW+ R L D LR SLN HLE+A +++P+ Sbjct: 301 DMWGELRAWLKRDLHSSDSALHARVVAAGQWVSRELANDPALRQSLNDHLEEAARAMAPE 360 Query: 361 VAQLLTRHISDTIKQWDTAELSRQIELNIGRDLQYIRINGTLVGGLIGALLFGLSWLMQW 420 A+ LTRHISDT+K W+ ++SRQIELNIGRDLQYIRINGT+VGG IG LL+ S L + Sbjct: 361 FARFLTRHISDTVKNWNAEDMSRQIELNIGRDLQYIRINGTVVGGFIGLLLYVSSQLFEL 420 Query: 421 L 421 L Sbjct: 421 L 421 >ref|YP_003908976.1| hypothetical protein BC1003_3745 [Burkholderia sp. CCGE1003] gb|ADN59685.1| protein of unknown function DUF445 [Burkholderia sp. CCGE1003] Length = 426 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 233/421 (55%), Positives = 314/421 (74%) Query: 1 MDKQQALRRTKRLALGCLLGSAALFVAASLAAPSTWSALLRAMAEAAMVGALADWFAVTA 60 M+K L++ KR L L +A +FVA +L W ++A+AEAAMVGALADWFAV A Sbjct: 1 MNKALELKKAKRTPLLLLAAAACVFVATALLPRGVWIDGIKAVAEAAMVGALADWFAVAA 60 Query: 61 LFRRVPLPFLARHTAIIPRNKDRIADNLAVFVEEKFLSPQSLAGLVRRHDPAQRLSAWMA 120 LFRRVP+P ++ HTAIIPRNK +IADNLAVFV++KFL SL GL+++HDPAQ ++ W++ Sbjct: 61 LFRRVPIPIVSAHTAIIPRNKHKIADNLAVFVQDKFLDVPSLVGLIKKHDPAQSITRWLS 120 Query: 121 APENAARLGGYMVQAVGGVLTLTDDRRIQAFVREALQTALGKLDLSRSLASILDTLTLDG 180 A N+AR+ Y+V+ GG+L LTDD RIQAF+++AL+ LGK+DLS+S+ SILDTLT DG Sbjct: 121 ASANSARIADYVVKVTGGMLDLTDDVRIQAFIKDALRDVLGKVDLSQSMGSILDTLTKDG 180 Query: 181 RHQQLLDRAIVALAELLNREQTRAFIAERMVEWLQREYPKIEKLLPSNWIGEKSADTLAD 240 RHQ+LLD I + LL + R FIAER+V+W++ EYPK+EK+LPS W+GEK A+ +A Sbjct: 181 RHQELLDAGIEQVLALLRHAEAREFIAERIVDWVKSEYPKMEKILPSAWLGEKGAEAIAS 240 Query: 241 ILDKLLTGIAEDPQHSLRQAFDRQLAGFVMRLKEDPALRERAEEIKREILQGEAVNAYVG 300 ++++L I+E+P H LRQ FD +++LK DPA ++ EE+KR +++GEA+ +YV Sbjct: 241 AVNRMLEQISENPTHQLRQKFDDAAHKLIVKLKSDPAFLQKGEELKRYLVEGEALGSYVK 300 Query: 301 SLWDSLRQWLRQDLARLDSALHAQASAATQWIGRALQEDAELRASLNAHLEQAIASLSPD 360 +W LR WL++DL DSALHA+ AA QW+GR L DA LR SLN HLE+A +++P+ Sbjct: 301 DMWGELRAWLKRDLQSSDSALHARVVAAGQWVGRELANDAALRQSLNDHLEEAARAMAPE 360 Query: 361 VAQLLTRHISDTIKQWDTAELSRQIELNIGRDLQYIRINGTLVGGLIGALLFGLSWLMQW 420 A+ LTRHISDT+K W+ ++SRQIELNIGRDLQYIRINGT+VGG IG LL+ S L + Sbjct: 361 FARFLTRHISDTVKNWNAEDMSRQIELNIGRDLQYIRINGTVVGGFIGLLLYVSSQLFEL 420 Query: 421 L 421 L Sbjct: 421 L 421 >ref|ZP_02881642.1| protein of unknown function DUF445 [Burkholderia graminis C4D1M] gb|EDT13071.1| protein of unknown function DUF445 [Burkholderia graminis C4D1M] Length = 426 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 231/412 (56%), Positives = 308/412 (74%) Query: 1 MDKQQALRRTKRLALGCLLGSAALFVAASLAAPSTWSALLRAMAEAAMVGALADWFAVTA 60 M+K L++ KR L L +A +FVA +L W ++A+AEAAMVGALADWFAV A Sbjct: 1 MNKALELKKAKRTPLLLLAAAACVFVATALMPRGLWIDGIKAVAEAAMVGALADWFAVAA 60 Query: 61 LFRRVPLPFLARHTAIIPRNKDRIADNLAVFVEEKFLSPQSLAGLVRRHDPAQRLSAWMA 120 LFRRVP+P ++ HTAIIPRNK +IADNLAVFV++KFL SL GL+R+HDPAQ ++ W+A Sbjct: 61 LFRRVPIPLVSAHTAIIPRNKHKIADNLAVFVQDKFLDVPSLVGLIRKHDPAQSIARWLA 120 Query: 121 APENAARLGGYMVQAVGGVLTLTDDRRIQAFVREALQTALGKLDLSRSLASILDTLTLDG 180 P N+ARLG Y+V+ G+L LTDD RIQ F+++AL+ L K+DLS+S+ SILDTLT DG Sbjct: 121 EPANSARLGDYVVKLTSGMLDLTDDVRIQVFIKDALRDVLAKVDLSQSMGSILDTLTKDG 180 Query: 181 RHQQLLDRAIVALAELLNREQTRAFIAERMVEWLQREYPKIEKLLPSNWIGEKSADTLAD 240 RHQ+LLD I + LL Q R FIA+R+V+W++ EYPK+EK+LPS W+GEK A+ LA+ Sbjct: 181 RHQELLDAGIEQVVALLREPQAREFIAQRIVDWVKSEYPKMEKILPSAWLGEKGAEALAN 240 Query: 241 ILDKLLTGIAEDPQHSLRQAFDRQLAGFVMRLKEDPALRERAEEIKREILQGEAVNAYVG 300 ++++L I+E+P H LRQ FD +++LK DPA ++ EE+KR +++GEA+ +YV Sbjct: 241 AVNRMLEQISENPTHELRQKFDGAAHKLIVKLKSDPAFLQKGEELKRYLVEGEALASYVK 300 Query: 301 SLWDSLRQWLRQDLARLDSALHAQASAATQWIGRALQEDAELRASLNAHLEQAIASLSPD 360 +W LR WL++DL DSALHA+ A+ QW+GR L D LR SLN HLE+A +++P+ Sbjct: 301 DMWGELRAWLKRDLHSSDSALHARVVASGQWVGRELANDPALRQSLNDHLEEAARAMAPE 360 Query: 361 VAQLLTRHISDTIKQWDTAELSRQIELNIGRDLQYIRINGTLVGGLIGALLF 412 A+ LTRHISDT+K W+ E+SRQIELNIGRDLQYIRINGT+VGG IG LL+ Sbjct: 361 FARFLTRHISDTVKNWNAPEMSRQIELNIGRDLQYIRINGTVVGGFIGLLLY 412