BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5047.p (279 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773453.1| response regulator for cobalt/zinc/cadmium r... 412 e-113 ref|YP_004753177.1| putative response regulator for cobalt zinc ... 325 6e-87 ref|YP_296024.1| two component heavy metal response transcriptio... 324 1e-86 ref|YP_583899.1| DNA-binding response regulator in two-component... 318 7e-85 gb|AEG70968.1| response regulator protein for cobalt zinc cadmiu... 313 2e-83 >ref|YP_003773453.1| response regulator for cobalt/zinc/cadmium resistance transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ61545.1| response regulator for cobalt/zinc/cadmium resistance transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 235 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 211/219 (96%), Positives = 218/219 (99%) Query: 57 MHILLVEDEPKSGEYLRRGLTESGFVVDWVQTGVDGLHNARTLDYKLIILDVMLPGMNGW 116 MHILLVEDEPKSG+YLRRGLTESGFVVDWVQTGVDGLHNARTLDYKLIILDVMLPGMNGW Sbjct: 1 MHILLVEDEPKSGDYLRRGLTESGFVVDWVQTGVDGLHNARTLDYKLIILDVMLPGMNGW 60 Query: 117 DILRELRRTHDTPVLFLTARDEVEDRVKGLELGADDYLVKPFAFTELLARVRTLLRRGPS 176 DILRELRRTHDTPVLFLTARDEVEDRVKGLELGADDYLVKPFA+TELLARVRTLLRRGPS Sbjct: 61 DILRELRRTHDTPVLFLTARDEVEDRVKGLELGADDYLVKPFAYTELLARVRTLLRRGPS 120 Query: 177 READLIEYEDVVVDVIRRKVTRAGQRIDLTAKEFALLHMLIRRPGEVLSRPQIASQVWDM 236 RE DLIEY+DVV+DV+RRKVTRAGQRIDLTAKEFALLHMLIRRPGEVLSRPQIASQVWDM Sbjct: 121 REVDLIEYDDVVLDVLRRKVTRAGQRIDLTAKEFALLHMLIRRPGEVLSRPQIASQVWDM 180 Query: 237 NFDSDTNVVDVAVRRLRAKLDEGFDQKLLHTVWGMGYVF 275 NFDSDTNVVDVAVRRLRAKLDEGF++KLLHTVWGMGYVF Sbjct: 181 NFDSDTNVVDVAVRRLRAKLDEGFEKKLLHTVWGMGYVF 219 >ref|YP_004753177.1| putative response regulator for cobalt zinc cadmium resistance transcription regulator protein [Collimonas fungivorans Ter331] gb|AEK62354.1| putative response regulator for cobalt zinc cadmium resistance transcription regulator protein [Collimonas fungivorans Ter331] Length = 223 Score = 325 bits (832), Expect = 6e-87, Method: Composition-based stats. Identities = 162/222 (72%), Positives = 192/222 (86%) Query: 57 MHILLVEDEPKSGEYLRRGLTESGFVVDWVQTGVDGLHNARTLDYKLIILDVMLPGMNGW 116 M ILLVEDEPK+GEYLR+GL+ESG+VVDWV+TG DGLH A T DY LI+LDVMLPGM+GW Sbjct: 1 MRILLVEDEPKAGEYLRKGLSESGYVVDWVRTGADGLHCATTEDYDLIVLDVMLPGMDGW 60 Query: 117 DILRELRRTHDTPVLFLTARDEVEDRVKGLELGADDYLVKPFAFTELLARVRTLLRRGPS 176 ++ ELR+TH TPVLFLTARDEV+DR+KGLELGADDYLVKPFAF EL+AR+RTLLRRGP Sbjct: 61 QVISELRKTHSTPVLFLTARDEVDDRIKGLELGADDYLVKPFAFAELVARIRTLLRRGPI 120 Query: 177 READLIEYEDVVVDVIRRKVTRAGQRIDLTAKEFALLHMLIRRPGEVLSRPQIASQVWDM 236 READL+ D+ +DV++R+VTR G+RIDLT KEF+LL+++ +R EVLSR IASQVWDM Sbjct: 121 READLLHIADMEIDVMKRRVTRNGERIDLTTKEFSLLYLMAKRQSEVLSRSLIASQVWDM 180 Query: 237 NFDSDTNVVDVAVRRLRAKLDEGFDQKLLHTVWGMGYVFEVR 278 NFDSDTNVVDVA+RRLR K+DE + L+HTV GMGYV E R Sbjct: 181 NFDSDTNVVDVAIRRLRIKIDEPYAPPLIHTVRGMGYVLEDR 222 >ref|YP_296024.1| two component heavy metal response transcriptional regulator [Ralstonia eutropha JMP134] gb|AAZ61180.1| two component heavy metal response transcriptional regulator, winged helix family [Ralstonia eutropha JMP134] Length = 224 Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats. Identities = 169/222 (76%), Positives = 188/222 (84%) Query: 57 MHILLVEDEPKSGEYLRRGLTESGFVVDWVQTGVDGLHNARTLDYKLIILDVMLPGMNGW 116 M IL+VEDEPK+GEYLR+GLTES FVVD TG DGLH A +Y LIILDVMLPGM+GW Sbjct: 1 MKILVVEDEPKTGEYLRKGLTESSFVVDVAVTGGDGLHQATEHEYDLIILDVMLPGMSGW 60 Query: 117 DILRELRRTHDTPVLFLTARDEVEDRVKGLELGADDYLVKPFAFTELLARVRTLLRRGPS 176 D+LR+LR DTPVLFLTARDEVEDRV+GLELG DDYL KPFAF ELLARVRTLLRRGP Sbjct: 61 DVLRQLRERKDTPVLFLTARDEVEDRVRGLELGGDDYLAKPFAFVELLARVRTLLRRGPV 120 Query: 177 READLIEYEDVVVDVIRRKVTRAGQRIDLTAKEFALLHMLIRRPGEVLSRPQIASQVWDM 236 READ IE D+ +DVIR +VTRAGQRIDLT +EFALLH L RR GEVLSR IASQVWDM Sbjct: 121 READRIEIGDLEIDVIRHRVTRAGQRIDLTPREFALLHFLARRHGEVLSRTHIASQVWDM 180 Query: 237 NFDSDTNVVDVAVRRLRAKLDEGFDQKLLHTVWGMGYVFEVR 278 NFDSDTNVVDVA+RRLRAK+D+ F KL+H+V G+GYV E+R Sbjct: 181 NFDSDTNVVDVAIRRLRAKMDDHFAPKLIHSVRGIGYVLEIR 222 >ref|YP_583899.1| DNA-binding response regulator in two-component regulatory system with AgrS [Cupriavidus metallidurans CH34] gb|ABF08630.1| DNA-binding response regulator in two-component regulatory system with AgrS [Cupriavidus metallidurans CH34] Length = 224 Score = 318 bits (814), Expect = 7e-85, Method: Composition-based stats. Identities = 161/223 (72%), Positives = 188/223 (84%) Query: 57 MHILLVEDEPKSGEYLRRGLTESGFVVDWVQTGVDGLHNARTLDYKLIILDVMLPGMNGW 116 M IL++EDEPK+GEYLR+GLTES FVVD TG DGLH+A DY L+ILDVMLPGMNGW Sbjct: 1 MKILVIEDEPKTGEYLRKGLTESSFVVDLASTGRDGLHHAIDGDYDLVILDVMLPGMNGW 60 Query: 117 DILRELRRTHDTPVLFLTARDEVEDRVKGLELGADDYLVKPFAFTELLARVRTLLRRGPS 176 ++L+ELR DTPVLFLTARDEVEDRVKGLELG DDYL KPFAF ELLAR RTLLRRGP+ Sbjct: 61 EVLKELREHKDTPVLFLTARDEVEDRVKGLELGGDDYLAKPFAFVELLARARTLLRRGPT 120 Query: 177 READLIEYEDVVVDVIRRKVTRAGQRIDLTAKEFALLHMLIRRPGEVLSRPQIASQVWDM 236 REA+ IE ED+ +D++R +V+R G RIDL+ +EFALLH L RR GEVLSR QIAS VWDM Sbjct: 121 REAERIEIEDLEIDLLRHRVSRGGIRIDLSPREFALLHFLARRHGEVLSRTQIASHVWDM 180 Query: 237 NFDSDTNVVDVAVRRLRAKLDEGFDQKLLHTVWGMGYVFEVRR 279 NFDSDTNVVDVA+RRLRAK+D+ + KL+H+V G+GYV E R+ Sbjct: 181 NFDSDTNVVDVAIRRLRAKMDDTYAPKLIHSVRGIGYVLENRQ 223 >gb|AEG70968.1| response regulator protein for cobalt zinc cadmium resistance [Ralstonia solanacearum Po82] Length = 246 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 155/228 (67%), Positives = 194/228 (85%) Query: 49 SCPSGIPIMHILLVEDEPKSGEYLRRGLTESGFVVDWVQTGVDGLHNARTLDYKLIILDV 108 + P + IM +L+VEDEPK+G+YL +GLTESGFV D ++G DGL+ A DY LI+LDV Sbjct: 15 TAPFSVFIMRLLIVEDEPKAGDYLLKGLTESGFVADLARSGPDGLYQAIEHDYDLIVLDV 74 Query: 109 MLPGMNGWDILRELRRTHDTPVLFLTARDEVEDRVKGLELGADDYLVKPFAFTELLARVR 168 MLPGM+GW ++RELRR TPVLFLTARDE+ DR+KGLELGADDYLVKPFAF EL+ARVR Sbjct: 75 MLPGMDGWQVIRELRRRKPTPVLFLTARDELSDRLKGLELGADDYLVKPFAFAELVARVR 134 Query: 169 TLLRRGPSREADLIEYEDVVVDVIRRKVTRAGQRIDLTAKEFALLHMLIRRPGEVLSRPQ 228 T+LRRGP RE+++++ D+ +D I+R+VTRAGQRIDLTAKE+ALLH+L RR GEVLSR Sbjct: 135 TILRRGPMRESEILDIADLSIDTIKRRVTRAGQRIDLTAKEYALLHLLARRAGEVLSRSL 194 Query: 229 IASQVWDMNFDSDTNVVDVAVRRLRAKLDEGFDQKLLHTVWGMGYVFE 276 I+SQVWD+NFDS+TNVVDVA+RRLRAK+D+ F+ KL+HT+ GMGYV + Sbjct: 195 ISSQVWDVNFDSNTNVVDVAIRRLRAKVDDPFEPKLIHTLRGMGYVLD 242