BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5044.p (444 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773451.1| hypothetical protein Hsero_0013 [Herbaspiril... 434 e-119 ref|YP_003910400.1| hypothetical protein BC1003_5189 [Burkholder... 134 2e-29 ref|ZP_02884150.1| conserved hypothetical protein [Burkholderia ... 128 2e-27 ref|YP_004230688.1| hypothetical protein BC1001_4225 [Burkholder... 121 2e-25 ref|ZP_08868455.1| hypothetical protein AZA_88275 [Azospirillum ... 119 9e-25 >ref|YP_003773451.1| hypothetical protein Hsero_0013 [Herbaspirillum seropedicae SmR1] gb|ADJ61543.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 311 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 210/307 (68%), Positives = 248/307 (80%), Gaps = 6/307 (1%) Query: 144 KSSARSVVAVLLVLAMSLLCAASPRAQS------PAANAQVIEIKLADLNDDNPLINYRK 197 K+S SVVA LV+ M L+CA AQS PA N IEIKLADLNDDNPLINYRK Sbjct: 5 KTSVLSVVASTLVVTMGLVCARPAIAQSTTISPAPAGNESTIEIKLADLNDDNPLINYRK 64 Query: 198 AVLELAMRASGRPFSIKGCRVANVATSDQRYVQLIQAGQYCNLITTSAGSGMTRTLEPIP 257 AV+ELAMRASG+ +++ GC++ +TSD+R+VQLIQAGQYCNL+ TSAG +TR LE IP Sbjct: 65 AVIELAMRASGKSYTLTGCQITEASTSDRRFVQLIQAGQYCNLMATSAGGELTRGLETIP 124 Query: 258 FPIYLGGGGYRVLLARRESLEPARSIRTLADLRAFTIGSGIGWVDTSIMQANQLKVAQSN 317 FPIYLGGGG RVLLA R+SLE A ++R+L DLR F IGSG GWVDTSIMQAN L V QS+ Sbjct: 125 FPIYLGGGGIRVLLAHRKSLEAATTLRSLNDLRKFRIGSGSGWVDTSIMQANGLTVVQSS 184 Query: 318 YLNLFEMLKAGRFDFYNRSIFEATSELEAYDSAHQLAIVPDLVLYYPTDLFFYTSPGRDD 377 Y+NLFEMLKA RFDFYNRS+FEA ELE YD HQLA+VPDL+LYYP+DLFFYT+PGRDD Sbjct: 185 YMNLFEMLKAQRFDFYNRSVFEAVGELENYDPQHQLAVVPDLILYYPSDLFFYTTPGRDD 244 Query: 378 IRDALLEGLKKIHRNGALLDLIQKHSSTRQVRQAMRGTRPRVIELHNDRLTPIERQAIET 437 IRDALL+GL+KI RNGAL +LIQ H STR R A++ + RV+ L N+RLTPIER+A+ET Sbjct: 245 IRDALLDGLRKIQRNGALAELIQNHRSTRNARVALKSGKLRVLALTNERLTPIEREALET 304 Query: 438 YKMDWFK 444 YK+DWF+ Sbjct: 305 YKLDWFR 311 >ref|YP_003910400.1| hypothetical protein BC1003_5189 [Burkholderia sp. CCGE1003] gb|ADN61109.1| hypothetical protein BC1003_5189 [Burkholderia sp. CCGE1003] Length = 318 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 96/296 (32%), Positives = 143/296 (48%), Gaps = 8/296 (2%) Query: 148 RSVVAVLLVLAMSLLCAASPRAQSPAANAQVIEIKLADLNDDNPLINYRKAVLELAMRAS 207 R V+A L + ++ + SPRA PA ++ ++ + + AVLELAM+ + Sbjct: 23 RLVIAALGMAGIAGM-PGSPRAM-PATGFDIVHPRVRTGGEARA--TFALAVLELAMKTA 78 Query: 208 GRPFSIKGCRVANVATSDQRYVQLIQAGQYCNLITTSAGSGMTRTLEPIPFPIYLGGGGY 267 P++I R A+VA R + + G NL+ TS S L + P+ G GY Sbjct: 79 NVPYTI---RQADVAMERGRALAELAGGNSINLLWTSMDSRAETGLNVVRIPVNRGLIGY 135 Query: 268 RVLLARRESLEPARSIRTLADLRAFTIGSGIGWVDTSIMQANQLKVAQSNYLNLFEMLKA 327 RV + R++ + LADLR T G G+GWVDT I+ LKV S+ LF M +A Sbjct: 136 RVFIIRKDRQPEFDRVDDLADLRRLTAGQGLGWVDTDILLDAGLKVETSSTDTLFAMTRA 195 Query: 328 GRFDFYNRSIFEATSELEAYDSAH-QLAIVPDLVLYYPTDLFFYTSPGRDDIRDALLEGL 386 GR D+Y R + EA E+EA D +L + L+L Y +D FY + + + G Sbjct: 196 GRVDYYPRGLIEAFPEMEARDQTDPELTVEKRLLLKYRSDFIFYVARSAPALAWTIERGF 255 Query: 387 KKIHRNGALLDLIQKHSSTRQVRQAMRGTRPRVIELHNDRLTPIERQAIETYKMDW 442 +RNG+ L L H + R RVIE+ N L+ +R+ + Y M W Sbjct: 256 TAAYRNGSYLRLFNTHPVIQNALTQSRLRERRVIEVDNRYLSAADREIPQEYWMQW 311 >ref|ZP_02884150.1| conserved hypothetical protein [Burkholderia graminis C4D1M] gb|EDT10154.1| conserved hypothetical protein [Burkholderia graminis C4D1M] Length = 297 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 85/247 (34%), Positives = 125/247 (50%), Gaps = 6/247 (2%) Query: 198 AVLELAMRASGRPFSIKGCRVANVATSDQRYVQLIQAGQYCNLITTSAGSGMTRTLEPIP 257 AVL+LAM+ + +SI R A+VA +R + + G NL+ TS L +P Sbjct: 48 AVLDLAMKTANVTYSI---RQADVAMERRRALAELADGNSINLLWTSMDRRAESGLNVVP 104 Query: 258 FPIYLGGGGYRVLLARRESLEPARSIRTLADLRAFTIGSGIGWVDTSIMQANQLKVAQSN 317 P+ G GYR+ + R++ ++ LADLR T G G+GWVDT I+ LKV S+ Sbjct: 105 IPVNRGLIGYRLFVIRKDRQAQFDRVQNLADLRQLTAGQGLGWVDTDILLDAGLKVETSS 164 Query: 318 YLNLFEMLKAGRFDFYNRSIFEATSELEAYDSAH-QLAIVPDLVLYYPTDLFFYTSPGRD 376 LF M +AGR D+Y R + EA E+EA++ +L + L+L Y +D FY + Sbjct: 165 TDTLFAMTRAGRIDYYPRGLIEAFPEIEAHNRIDPELTVEKRLLLKYRSDFLFYVARRNP 224 Query: 377 DIRDALLEGLKKIHRNGALLDLIQKHSSTRQVRQAMRGTRPR-VIELHNDRLTPIERQAI 435 + + G ++NG+ + L H Q A R R VIEL N L+ +R+ Sbjct: 225 ALASTIERGFMAAYKNGSYMRLFNAHPYI-QGALAQADLRERTVIELENRYLSAADRKIP 283 Query: 436 ETYKMDW 442 E Y M W Sbjct: 284 EEYWMQW 290 >ref|YP_004230688.1| hypothetical protein BC1001_4225 [Burkholderia sp. CCGE1001] gb|ADX57628.1| hypothetical protein BC1001_4225 [Burkholderia sp. CCGE1001] Length = 297 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 8/248 (3%) Query: 198 AVLELAMRASGRPFSIKGCRVANVATSDQRYVQLIQAGQYCNLITTSAGSGMTRTLEPIP 257 AVL+LAM+ + + I R A+VA R + + G NL+ TS S L + Sbjct: 48 AVLDLAMKTANATYRI---READVAMERGRALAELADGSSINLLWTSMDSRAEHGLNVVH 104 Query: 258 FPIYLGGGGYRVLLARRESLEPARSIRTLADLRAFTIGSGIGWVDTSIMQANQLKVAQSN 317 P+ G GYR+ + R++ ++ LADL+ T G G+GWVDT I++ LKV S+ Sbjct: 105 IPVNRGLIGYRLFVIRKDRQAEFDRVQNLADLQRLTAGQGLGWVDTDILRDAGLKVETSS 164 Query: 318 YLNLFEMLKAGRFDFYNRSIFEATSELEAY-DSAHQLAIVPDLVLYYPTDLFFYTSPGRD 376 L M +AGR D+Y R + EA E+EA +S +L + L+L Y +D FY GR Sbjct: 165 TDTLLAMTRAGRIDYYPRGLIEAFPEMEARGESGPELTVEKRLLLKYRSDFLFYV--GRR 222 Query: 377 D--IRDALLEGLKKIHRNGALLDLIQKHSSTRQVRQAMRGTRPRVIELHNDRLTPIERQA 434 D + + G ++NG+ + L H + RVIEL N L+ +R+ Sbjct: 223 DPALASTIERGFAGAYKNGSYMRLFNSHPYIQNALAQADLRERRVIELDNRYLSAADRKI 282 Query: 435 IETYKMDW 442 Y M W Sbjct: 283 PAEYWMGW 290 >ref|ZP_08868455.1| hypothetical protein AZA_88275 [Azospirillum amazonense Y2] gb|EGY01955.1| hypothetical protein AZA_88275 [Azospirillum amazonense Y2] Length = 308 Score = 119 bits (299), Expect = 9e-25, Method: Composition-based stats. Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 16/313 (5%) Query: 140 MSRDKSSARS--VVAVLLVLAMSLLCAASPRAQSPAANAQVIEIKLADL------NDDNP 191 MS +S+ R+ + AV V+ + L A + RA + A ++ LA + + D+P Sbjct: 1 MSHVRSAVRAWRLAAVAFVVLVCAL-AWNRRATAGAVESEASTPPLAIIYPRYVESGDDP 59 Query: 192 LINYRKAVLELAMRASGRPFSIKGCRVANVATSDQRYVQLIQAGQYCNLITTSAGSGMTR 251 +Y +L LA+ G +++ R ++ R V ++AG NL + + + R Sbjct: 60 RADYPLGLLRLALDKMGARYTL---RPSDTLMERTRAVAALKAGAVINLAWVGSNAELER 116 Query: 252 TLEPIPFPIYLGGGGYRVLLARRESLEPARSIRTLADLRAFTIGSGIGWVDTSIMQANQL 311 L PI PIY G GYR+ + R++ + TL DLR T G G+GW D I QA L Sbjct: 117 ELRPIRIPIYRGLLGYRLFIIRKQDQARFTDVHTLDDLRRLTAGQGLGWTDVDIFQAAGL 176 Query: 312 KVAQSNYLNLFEMLKAGRFDFYNRSIFEATSELEAYDS-AHQLAIVPDLVLYYPTDLFFY 370 V Y LF +++ GR D++ RS E +EL A+ + L + L+L Y L+F+ Sbjct: 177 PVETFRYDLLFRLMQQGRLDYFPRSASEIYAELAAHSADCPDLTVEDSLLLVYRLPLYFF 236 Query: 371 TSPGRDDIRDALLEGLKKIHRNGALLDLIQKHSSTRQVRQAMRGTRPRVIELHNDRLTPI 430 TS + + + EGL++ + +G+ L +H + R++ R I++ N +P Sbjct: 237 TSKKDEALAATIEEGLRRAYDDGSFLKYFNEHPAIRKLLAEAHLETRRRIDIPNPVQSPE 296 Query: 431 ERQAIETYKMDWF 443 + Y WF Sbjct: 297 TAALPDKY---WF 306