BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5039.p (273 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07025848.1| hypothetical protein AfiDRAFT_0977 [Afipia sp... 283 2e-74 ref|ZP_07260925.1| hypothetical protein PsyrptN_26322 [Pseudomon... 202 5e-50 ref|ZP_02157423.1| hypothetical protein KT99_09983 [Shewanella b... 110 3e-22 ref|ZP_08471344.1| hypothetical protein HMPREF9456_02939 [Dysgon... 107 2e-21 ref|NP_622326.1| hypothetical protein TTE0664 [Thermoanaerobacte... 80 4e-13 >ref|ZP_07025848.1| hypothetical protein AfiDRAFT_0977 [Afipia sp. 1NLS2] gb|EFI52990.1| hypothetical protein AfiDRAFT_0977 [Afipia sp. 1NLS2] Length = 271 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 160/272 (58%), Positives = 188/272 (69%), Gaps = 6/272 (2%) Query: 1 MRTNQFTRPTLAAATELLGVSLTQGLFGQMLFRLTLGTRIPADDKISVTKKVVLLNAILE 60 MRT FTRPTL AA ELL +QG F QM+ RL L IP+ +SVTKK LL I+ Sbjct: 1 MRTMPFTRPTLIAAVELLE-GHSQGRFNQMVLRLGLEDDIPSSTGLSVTKKCDLLGRIVV 59 Query: 61 TDGQVQVATLDGQMTLIEAVVMEAVSVTQENSRQHAEHQSLLERALALDGFVIEWAQGHG 120 + T +G MTL EAVV EA+ + +S Q+ R LA DG+V+ W +G Sbjct: 60 QRPAAVLETTEGSMTLAEAVVREALQLA--HSEPTLPIQTAFARGLARDGYVLSW-DDYG 116 Query: 121 SKPRLRAALPSEVDLPDTDDEVHLLLKHFNFTVSLGHLDQAIDAHTRGNWAGANSQTRTF 180 P LRAALP E++LP TDDEVH LLK F F LGHL QAI+AHTRG+WA ANSQ RTF Sbjct: 117 RNPTLRAALPDELNLPVTDDEVHQLLKGFRFETPLGHLGQAIEAHTRGDWAAANSQLRTF 176 Query: 181 MESLFDSIAIHIDASTASGNS--ENRRAFLATKQFFSVDRNEWTADGKNYINGLFKMLHT 238 MESLFD IA ++ + A+ ENRRA LA F ++DRNEWT DGKNYING+FKMLHT Sbjct: 177 MESLFDDIARNVRPAEAAQRPTVENRRALLAEIGFLAIDRNEWTQDGKNYINGVFKMLHT 236 Query: 239 EGSHPGLSDEDRSTFRLHVVLVTARTFLRRLK 270 EGSHPGLSDED STFRLH+VL+TARTFLRRL+ Sbjct: 237 EGSHPGLSDEDHSTFRLHLVLITARTFLRRLQ 268 >ref|ZP_07260925.1| hypothetical protein PsyrptN_26322 [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 237 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 120/235 (51%), Positives = 143/235 (60%), Gaps = 9/235 (3%) Query: 44 DKISVTKKVVLLN-AILETDGQVQVATLDGQMTLIEAVVMEAVSVTQENSRQHAEHQSLL 102 DK S KK V N A+LE G V A +GQMT EA++ EA + S E Q Sbjct: 5 DKWSAPKKRVAFNKALLERAGLVFPAR-EGQMTHGEALIREAARLMSLPSLH--EEQEQF 61 Query: 103 ERALALDGFVIEWAQG---HGSKPRLRAALPSEVDLPDTDDEVHLLLKHFNFTVSLGHLD 159 ER LA DGF + W G G+ P LR +LP VDLP +DD+VH LK F F S GHLD Sbjct: 62 ERCLARDGFTVSWDAGDCGQGTPPWLRRSLPQNVDLPASDDQVHQHLKRFGFVRSCGHLD 121 Query: 160 QAIDAHTRGNWAGANSQTRTFMESLFDSIAIHIDASTASGNSENRRAF--LATKQFFSVD 217 QAIDAHTRG+WA AN+Q RTF+ESL IA I ++ S F LA + F S Sbjct: 122 QAIDAHTRGDWAAANAQIRTFIESLVLEIATQIASANLPPQSGLNNGFQALANRGFLSES 181 Query: 218 RNEWTADGKNYINGLFKMLHTEGSHPGLSDEDRSTFRLHVVLVTARTFLRRLKNN 272 R+EW DGK +NGL +MLH++GSH GLSDED ST RLH+ LVT+R L RL NN Sbjct: 182 RSEWNQDGKGMLNGLMRMLHSDGSHKGLSDEDHSTMRLHIALVTSRALLNRLANN 236 >ref|ZP_02157423.1| hypothetical protein KT99_09983 [Shewanella benthica KT99] gb|EDQ01021.1| hypothetical protein KT99_09983 [Shewanella benthica KT99] Length = 220 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 8/178 (4%) Query: 92 SRQHAEHQSLLERALALDGFVIEWAQGHGSKPRLRAALPSEVDLPDTDDEVHLLLKHFNF 151 +R H + + LE LA DG+ + S +R +LPS + L +++++ +L Sbjct: 46 NRTHQTNTTELENTLAKDGYEL-------SDSSVRKSLPSAIPLVQSENKLLDILNRRGL 98 Query: 152 TVSLGHLDQAIDAHTRGNWAGANSQTRTFMESLFDSIAIHIDASTASGNSENRRAFLATK 211 V++GH +QAI AH RG+WA AN+Q R+F+E F+ I + A + +++ R+ LA Sbjct: 99 VVAVGHYEQAIAAHGRGDWAAANAQLRSFVEDFFNQCHILLSAGPGT-STQQRKEDLART 157 Query: 212 QFFSVDRNEWTADGKNYINGLFKMLHTEGSHPGLSDEDRSTFRLHVVLVTARTFLRRL 269 FFS NE+ +G ++ G +K LH EGSHPGLS+ S+FRLH+VL+ + RL Sbjct: 158 GFFSSSYNEFLNNGTGFVEGFWKRLHPEGSHPGLSESADSSFRLHLVLLVLHHYAERL 215 >ref|ZP_08471344.1| hypothetical protein HMPREF9456_02939 [Dysgonomonas mossii DSM 22836] gb|EGK05269.1| hypothetical protein HMPREF9456_02939 [Dysgonomonas mossii DSM 22836] Length = 294 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 65/151 (43%), Positives = 91/151 (60%), Gaps = 12/151 (7%) Query: 129 LPSEVDLPDTDDEVHLLLKHFNFTVSLGHLDQAIDAHTRGNWAGANSQTRTFMESLFDSI 188 LP E+ + +T++E+ LL HFNF+ S HL QAI H+ NWA AN Q RTF+ESL I Sbjct: 143 LPEELLVTNTENELIRLLDHFNFSTSKAHLVQAISNHSSSNWAAANGQFRTFIESLLIEI 202 Query: 189 AIHIDASTAS---GNSENRRA------FLATKQFFSVDRNEWTADGKNYINGLFKMLHTE 239 A ++++++ G+++N + L T S+ N K+Y+ GL+K LH Sbjct: 203 AHNLNSTSTCTDFGSAQNELSNLNPPFLLRTLNEVSISTNPLD---KSYVAGLWKRLHPT 259 Query: 240 GSHPGLSDEDRSTFRLHVVLVTARTFLRRLK 270 GSHPG+SDE+ STFR H V V AR L RL+ Sbjct: 260 GSHPGISDEEDSTFRYHTVSVFARYLLARLE 290 >ref|NP_622326.1| hypothetical protein TTE0664 [Thermoanaerobacter tengcongensis MB4] gb|AAM23930.1| hypothetical protein TTE0664 [Thermoanaerobacter tengcongensis MB4] Length = 266 Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 42/281 (14%) Query: 5 QFTRPTLAAATELLGVSLTQGLFGQMLFR---LTLGTRIP-ADDKISVTKKVV-LLNAIL 59 +F+ T+A E+L + G L R L + R+P K+ ++V+ LN + Sbjct: 4 KFSDRTMAICGEILSELFSDGELQNFLSRFGLLDIYRRLPQGTGKLKRIQEVIAYLNQLN 63 Query: 60 ETDGQVQVATLDGQMTLIEAVVMEAVSVTQENSRQHAEHQSL-------LERALALDGFV 112 T+ + ++ + +V+E V T + + A SL LE LALDG+ Sbjct: 64 NTENKDKIW---------DDIVIETVK-TIKQIEERAPVSSLVMEKIRKLEECLALDGYQ 113 Query: 113 IEWAQGHGSKPRLRAALPSEVDLPDTDDEVHLLLKHFNFTVSLGHLDQAIDAHTRGNWAG 172 IE ++ ALP+ + D + L + V L HL A + + WA Sbjct: 114 IE-------NGKIIKALPAPTETIHIRDRLEQKLLDLGWFVPLQHLQDARENYAEERWAA 166 Query: 173 ANSQTRTFMESLFDSIAIHI----DASTASGNSENRRAFLATKQFFSVDRNEWTADGKNY 228 AN+ R+F++++FD+IA + G + RR FL T F + + E Sbjct: 167 ANASIRSFLQAIFDNIAEAMPNFPKEELVPGGA--RRQFLETIGFLTKEEAE-------L 217 Query: 229 INGLFKMLHTEGSHPGLSDEDRSTFRLHVVLVTARTFLRRL 269 + LFK+L T+GSHPGLSDE + R+ + + A FL R Sbjct: 218 VRALFKILATKGSHPGLSDESDCSSRILMSIGIAWRFLSRF 258