BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5036.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777266.1| signal peptide protein [Herbaspirillum serop... 352 2e-95 ref|YP_004754650.1| hypothetical protein CFU_4005 [Collimonas fu... 207 1e-51 gb|EEC66864.1| hypothetical protein OsI_33362 [Oryza sativa Indi... 204 7e-51 ref|ZP_04579537.1| conserved hypothetical protein [Oxalobacter f... 175 4e-42 ref|ZP_04577383.1| conserved hypothetical protein [Oxalobacter f... 159 2e-37 >ref|YP_003777266.1| signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ65358.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 184 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 177/184 (96%), Positives = 183/184 (99%) Query: 34 MTKLKSLVAKIAFAGVAAIAIQSPSYAIDGMSLEYGTGNNTQLARIGAQFNWGPDWNFWQ 93 MTKLKSLVAKIAFAGVAAIA+QSPSYAIDGMSLEYGTGN+TQL R+GAQFNWGP+WNFWQ Sbjct: 1 MTKLKSLVAKIAFAGVAAIAVQSPSYAIDGMSLEYGTGNSTQLVRLGAQFNWGPNWNFWQ 60 Query: 94 SNGTHVGGYWDLSLANWRMNHYNNTNDSGNLIDLGLTPVLRFQRDDGKGFYGEAGIGVHL 153 SNGTH+GGYWDLSLANWRMNHYNNTNDSGNL+DLGLTPVLRFQRDDGKGFYGEAGIGVHL Sbjct: 61 SNGTHIGGYWDLSLANWRMNHYNNTNDSGNLVDLGLTPVLRFQRDDGKGFYGEAGIGVHL 120 Query: 154 FSKLYRNNDKVLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARV 213 FSKLYRNNDKVLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARV Sbjct: 121 FSKLYRNNDKVLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARV 180 Query: 214 AYKF 217 AYKF Sbjct: 181 AYKF 184 >ref|YP_004754650.1| hypothetical protein CFU_4005 [Collimonas fungivorans Ter331] gb|AAT42436.1| hypothetical protein [Collimonas fungivorans Ter331] gb|AEK63827.1| hypothetical protein CFU_4005 [Collimonas fungivorans Ter331] Length = 182 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 104/165 (63%), Positives = 122/165 (73%), Gaps = 3/165 (1%) Query: 54 IQSPSYAIDGMSLEYGTGNNTQLARIGAQFNWGPDWNFWQSNGTHVGGYWDLSLANWRMN 113 + S S+A+D S E GTGN +QLAR+ AQ+NW + WQ + T +GGYWDLSLA +R N Sbjct: 20 VHSTSFAVDSASFELGTGNKSQLARVAAQWNW--NTALWQGSSTQLGGYWDLSLAEFRQN 77 Query: 114 HYNNT-NDSGNLIDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQFG 172 Y N NL D+G TPV RFQ +D KG YGEAGIGVHL S LY NN + STAF+FG Sbjct: 78 QYQNIPGQKKNLTDIGFTPVFRFQANDKKGLYGEAGIGVHLMSHLYDNNSRRFSTAFEFG 137 Query: 173 DHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 217 DHIG GYVFSNGLD+G++LQHFSNGGIK+PN G NFAV RVAY F Sbjct: 138 DHIGTGYVFSNGLDIGLKLQHFSNGGIKKPNSGANFAVLRVAYPF 182 >gb|EEC66864.1| hypothetical protein OsI_33362 [Oryza sativa Indica Group] Length = 106 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 102/106 (96%), Positives = 104/106 (98%) Query: 112 MNHYNNTNDSGNLIDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQF 171 MNHYN TNDS NL+DLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQF Sbjct: 1 MNHYNKTNDSANLVDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQF 60 Query: 172 GDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 217 GDH+GAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF Sbjct: 61 GDHVGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 106 >ref|ZP_04579537.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gb|EEO30510.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 179 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 91/174 (52%), Positives = 116/174 (66%), Gaps = 6/174 (3%) Query: 44 IAFAGVAAIAIQSPSYAIDGMSLEYGTGNNTQLARIGAQFNWGPDWNFWQSNGTHVGGYW 103 IA G AAI P++A+DG S E G G + QL R+G Q++W W Q+ G H+ GYW Sbjct: 12 IAVLGFAAI----PAHAVDGTSFEVGMGEHVQLYRVGLQWDWNKKW--LQTGGMHLNGYW 65 Query: 104 DLSLANWRMNHYNNTNDSGNLIDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDK 163 DL+L W + Y + N S N+ +G+TPV R++ D+ KG Y E GIG LFSK Y NN Sbjct: 66 DLNLGYWHGDRYEDRNASQNIGVIGITPVFRWENDNKKGIYVEGGIGASLFSKTYNNNGN 125 Query: 164 VLSTAFQFGDHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 217 +STAF+F DHIG GYVF+N DLG+RLQH+SN GIK+PN G NF V R AY+F Sbjct: 126 RMSTAFEFADHIGVGYVFNNNFDLGLRLQHYSNAGIKKPNSGENFVVLRGAYRF 179 >ref|ZP_04577383.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28345.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 177 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 81/165 (49%), Positives = 110/165 (66%), Gaps = 1/165 (0%) Query: 53 AIQSPSYAIDGMSLEYGTGNNTQLARIGAQFNWGPDWNFWQSNGTHVGGYWDLSLANWRM 112 A Q+ + +DG+S E G G + QLAR+G Q++W DW F + G H+ GYWDL+L W Sbjct: 14 ADQNTNSFVDGVSFEVGVGEHVQLARVGFQWDWNKDW-FRTAGGWHLNGYWDLNLGWWHG 72 Query: 113 NHYNNTNDSGNLIDLGLTPVLRFQRDDGKGFYGEAGIGVHLFSKLYRNNDKVLSTAFQFG 172 YN+ +++ N+ +G+TPV R++ KG Y EAGIG LFS+ Y NN + T+F+F Sbjct: 73 TRYNDEHETQNIGVIGITPVFRWENASKKGAYVEAGIGASLFSENYNNNGNKMGTSFEFA 132 Query: 173 DHIGAGYVFSNGLDLGIRLQHFSNGGIKQPNGGVNFAVARVAYKF 217 DHIG GYVF N DLG+R+QH+SN GI +PN G NF V R AY+F Sbjct: 133 DHIGVGYVFRNNFDLGLRVQHYSNAGISKPNDGENFIVLRGAYRF 177