BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5034.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777264.1| short-chain alcohol dehydrogenase [Herbaspir... 428 e-118 ref|YP_003608620.1| short-chain dehydrogenase/reductase SDR [Bur... 317 1e-84 ref|ZP_03270446.1| short-chain dehydrogenase/reductase SDR [Burk... 313 2e-83 ref|ZP_06841381.1| short-chain dehydrogenase/reductase SDR [Burk... 312 3e-83 ref|YP_001890576.1| short-chain dehydrogenase/reductase SDR [Bur... 311 6e-83 >ref|YP_003777264.1| short-chain alcohol dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65356.1| short-chain alcohol dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 245/254 (96%), Positives = 250/254 (98%) Query: 1 MSASTGRLAGKTVLITAAAQGIGRASTELFAREGARVIATDISKTHLEELASIAGVETHL 60 MSASTGRLAGKTVLITAAAQGIGRASTELFAREGARVIATDISK HL+ELA IAGVETHL Sbjct: 1 MSASTGRLAGKTVLITAAAQGIGRASTELFAREGARVIATDISKPHLDELAGIAGVETHL 60 Query: 61 LDVTDDDAIKALVAKVGTVDVLFNCAGYVAAGNILECDDKAWDFSFNLNAKAMFHTIRAV 120 LDVTDD AIKALVAK+GT+DVLFNCAGYVAAGNILECDDKAWDFSFNLNAKAMFHTIRAV Sbjct: 61 LDVTDDAAIKALVAKIGTIDVLFNCAGYVAAGNILECDDKAWDFSFNLNAKAMFHTIRAV 120 Query: 121 LPGMLAKKAGSIVNIASAASSVKGVANRFAYGASKAAVVGLTKSVAADFVSQGIRCNAIC 180 LPGMLAKKAGSIVNIASAASSVKGVANRFAYGASKAAVVGLTKSVAADFV+QGIRCNAIC Sbjct: 121 LPGMLAKKAGSIVNIASAASSVKGVANRFAYGASKAAVVGLTKSVAADFVAQGIRCNAIC 180 Query: 181 PGTIESPSLNQRISTQAKETGKSEDEVRAAFVARQPMGRIGKAEEVAALALYLASDESNF 240 PGTIESPSLNQRISTQAKETGKSE+EVRAAFV RQPMGRIGKAEEVAALALYLASDESNF Sbjct: 181 PGTIESPSLNQRISTQAKETGKSEEEVRAAFVGRQPMGRIGKAEEVAALALYLASDESNF 240 Query: 241 TTGSIHMIDGGWSN 254 TTGSIHMIDGGWSN Sbjct: 241 TTGSIHMIDGGWSN 254 >ref|YP_003608620.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002] gb|ADG19109.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002] Length = 247 Score = 317 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 183/252 (72%), Positives = 208/252 (82%), Gaps = 8/252 (3%) Query: 5 TGRLAGKTVLITAAAQGIGRASTELFAREGARVIATDISKTHLEELASIAG--VETHLLD 62 T RLAGKT LITAA QGIG A+ ELFAREGARVIATDI + +AG VE LD Sbjct: 2 TQRLAGKTALITAAGQGIGLATAELFAREGARVIATDI------RIDGLAGKPVEARKLD 55 Query: 63 VTDDDAIKALVAKVGTVDVLFNCAGYVAAGNILECDDKAWDFSFNLNAKAMFHTIRAVLP 122 V D AIKAL A+VGT+DVLFNCAGYV AGNILEC ++ WDF+F+LNAKAM+ IRA LP Sbjct: 56 VLDGAAIKALAAEVGTIDVLFNCAGYVHAGNILECSEEDWDFAFDLNAKAMYRMIRAFLP 115 Query: 123 GMLAKKAGSIVNIASAASSVKGVANRFAYGASKAAVVGLTKSVAADFVSQGIRCNAICPG 182 ML + GSI+N++SAASSVKGV NRFAYGASKAAVVGLTKSVAADFV++G+RCNAICPG Sbjct: 116 AMLERGGGSIINMSSAASSVKGVPNRFAYGASKAAVVGLTKSVAADFVTRGVRCNAICPG 175 Query: 183 TIESPSLNQRISTQAKETGKSEDEVRAAFVARQPMGRIGKAEEVAALALYLASDESNFTT 242 T+ SPSL QRI+ QA+ G S D V+AAFVARQPMGRIGK EE+AALALYLASDES+FTT Sbjct: 176 TVSSPSLEQRIAAQAQAQGASVDAVQAAFVARQPMGRIGKPEEIAALALYLASDESSFTT 235 Query: 243 GSIHMIDGGWSN 254 G +H+IDGGWSN Sbjct: 236 GQLHVIDGGWSN 247 >ref|ZP_03270446.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] gb|EDZ97974.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. H160] Length = 247 Score = 313 bits (802), Expect = 2e-83, Method: Composition-based stats. Identities = 182/252 (72%), Positives = 208/252 (82%), Gaps = 8/252 (3%) Query: 5 TGRLAGKTVLITAAAQGIGRASTELFAREGARVIATDISKTHLEELASIAG--VETHLLD 62 T RLAGKT LITAA QGIG A+ ELFAREGARVIATDI + +AG VE LD Sbjct: 2 TQRLAGKTALITAAGQGIGLATAELFAREGARVIATDI------RIDGLAGKPVEARKLD 55 Query: 63 VTDDDAIKALVAKVGTVDVLFNCAGYVAAGNILECDDKAWDFSFNLNAKAMFHTIRAVLP 122 V D AIKAL A+VGT+DVLFNCAG+V AG+ILEC ++ WDF+F+LNAKAM+ IRA LP Sbjct: 56 VLDGAAIKALAAEVGTIDVLFNCAGFVHAGSILECSEEDWDFAFDLNAKAMYRMIRAFLP 115 Query: 123 GMLAKKAGSIVNIASAASSVKGVANRFAYGASKAAVVGLTKSVAADFVSQGIRCNAICPG 182 ML K GSI+N++SAASSVKGV NRFAYGASKAAVVGLTKSVAADFV++G+RCNAICPG Sbjct: 116 AMLEKGGGSIINMSSAASSVKGVPNRFAYGASKAAVVGLTKSVAADFVTRGVRCNAICPG 175 Query: 183 TIESPSLNQRISTQAKETGKSEDEVRAAFVARQPMGRIGKAEEVAALALYLASDESNFTT 242 T+ SPSL QRI+ QA+ G S D V+AAFVARQPMGRIGK EE+AALALYLASDES+FTT Sbjct: 176 TVSSPSLEQRIAAQAQAQGASLDAVQAAFVARQPMGRIGKPEEIAALALYLASDESSFTT 235 Query: 243 GSIHMIDGGWSN 254 G +H+IDGGWSN Sbjct: 236 GQLHVIDGGWSN 247 >ref|ZP_06841381.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. Ch1-1] gb|EFG70907.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. Ch1-1] Length = 247 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 177/250 (70%), Positives = 206/250 (82%), Gaps = 4/250 (1%) Query: 5 TGRLAGKTVLITAAAQGIGRASTELFAREGARVIATDISKTHLEELASIAGVETHLLDVT 64 T RLAGKT LITAA QGIG A+ ELFAREGARVIATDI ++ELA V+ LDV Sbjct: 2 TQRLAGKTALITAAGQGIGLATAELFAREGARVIATDI---RIDELAG-KPVDARKLDVR 57 Query: 65 DDDAIKALVAKVGTVDVLFNCAGYVAAGNILECDDKAWDFSFNLNAKAMFHTIRAVLPGM 124 D+ AIKAL A++G +DVLFNCAG+V AGNILEC ++ WDF+F+LNAKAM+ TIRA LP M Sbjct: 58 DNAAIKALAAELGAIDVLFNCAGFVHAGNILECSEEDWDFAFDLNAKAMYRTIRAFLPAM 117 Query: 125 LAKKAGSIVNIASAASSVKGVANRFAYGASKAAVVGLTKSVAADFVSQGIRCNAICPGTI 184 L GSI+N++SAASSVKGV NRFAY ASKAAV+GLTKSVAADF+++G+RCNAICPGT+ Sbjct: 118 LDNGGGSIINMSSAASSVKGVPNRFAYSASKAAVIGLTKSVAADFITRGVRCNAICPGTV 177 Query: 185 ESPSLNQRISTQAKETGKSEDEVRAAFVARQPMGRIGKAEEVAALALYLASDESNFTTGS 244 SPSL QRI QA+ G + D V+AAFVARQPMGRIGK EE+AALALYLASDES+FTTG Sbjct: 178 ASPSLEQRIVDQAQAQGATLDAVQAAFVARQPMGRIGKPEEIAALALYLASDESSFTTGH 237 Query: 245 IHMIDGGWSN 254 H+IDGGWSN Sbjct: 238 AHVIDGGWSN 247 >ref|YP_001890576.1| short-chain dehydrogenase/reductase SDR [Burkholderia phytofirmans PsJN] gb|ACD21205.1| short-chain dehydrogenase/reductase SDR [Burkholderia phytofirmans PsJN] Length = 247 Score = 311 bits (797), Expect = 6e-83, Method: Composition-based stats. Identities = 177/252 (70%), Positives = 203/252 (80%), Gaps = 8/252 (3%) Query: 5 TGRLAGKTVLITAAAQGIGRASTELFAREGARVIATDISKTHLEELASIAG--VETHLLD 62 T RLAGKT LITAA QGIG A+ ELFAREGARVIATDI + +AG VE LD Sbjct: 2 TQRLAGKTALITAAGQGIGLATAELFAREGARVIATDI------RIDGLAGKPVEARKLD 55 Query: 63 VTDDDAIKALVAKVGTVDVLFNCAGYVAAGNILECDDKAWDFSFNLNAKAMFHTIRAVLP 122 V DD AIKAL A++G VDVLFNCAG+V AGNILEC ++ WDF+F+LN KAM+ IRA LP Sbjct: 56 VRDDAAIKALAAEIGAVDVLFNCAGFVHAGNILECSEEDWDFAFDLNVKAMYRMIRAFLP 115 Query: 123 GMLAKKAGSIVNIASAASSVKGVANRFAYGASKAAVVGLTKSVAADFVSQGIRCNAICPG 182 ML K GSI+N++SAASSVKGV NRFAY ASKAAV+GLTKSVAADF+++G+RCNAICPG Sbjct: 116 AMLDKGGGSIINMSSAASSVKGVPNRFAYSASKAAVIGLTKSVAADFITRGVRCNAICPG 175 Query: 183 TIESPSLNQRISTQAKETGKSEDEVRAAFVARQPMGRIGKAEEVAALALYLASDESNFTT 242 T+ SPSL QRI QA+ G + D V+AAFVARQPMGRIGK EE+AALALYL SDES+FTT Sbjct: 176 TVASPSLEQRIVAQAQAQGATLDAVQAAFVARQPMGRIGKPEEIAALALYLGSDESSFTT 235 Query: 243 GSIHMIDGGWSN 254 G H+IDGGWSN Sbjct: 236 GHAHVIDGGWSN 247