BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5032.p (511 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777262.1| altronate hydrolase [Herbaspirillum seropedi... 1013 0.0 ref|YP_001632556.1| UxaA family hydrolase [Bordetella petrii DSM... 759 0.0 ref|ZP_06689907.1| fumarate hydratase [Achromobacter piechaudii ... 751 0.0 ref|YP_003981562.1| D-galactarate dehydratase/altronate hydrolas... 746 0.0 ref|YP_727205.1| altronate dehydratase [Ralstonia eutropha H16] ... 743 0.0 >ref|YP_003777262.1| altronate hydrolase [Herbaspirillum seropedicae SmR1] gb|ADJ65354.1| altronate hydrolase (altronic acid hydratase) protein [Herbaspirillum seropedicae SmR1] Length = 511 Score = 1013 bits (2618), Expect = 0.0, Method: Composition-based stats. Identities = 503/511 (98%), Positives = 507/511 (99%) Query: 1 MKANSPIIRLNPVDDVVIARQQLISGTVLQDEGGLKVQGLIPAGHKMATRAISAGEPVKR 60 MKA+SP+IRLNPVDDVVIARQQLISGTVLQDEGGLKVQGLIPAGHKMATRAI+AGEPVKR Sbjct: 1 MKAHSPVIRLNPVDDVVIARQQLISGTVLQDEGGLKVQGLIPAGHKMATRAITAGEPVKR 60 Query: 61 YGQIIGTASQDIAPGQHVHTHNLAMAEFSREHHFGADVKPVDFVAEPATFMGIVRPDGRV 120 YGQIIGTASQDIAPGQHVHTHNLAMAEFSREHHFGADVKPVDFVA PATFMGIVRPDGRV Sbjct: 61 YGQIIGTASQDIAPGQHVHTHNLAMAEFSREHHFGADVKPVDFVATPATFMGIVRPDGRV 120 Query: 121 ATRNYIGVLTSVNCSATAARAIADYFRRDIHPEVLADYPNIDGVVALTHGQGCATDSQGE 180 ATRNYIGVLTSVNCSATAARAIADYFRRDIHPEVLADYPNIDGVVALTHGQGCA DSQGE Sbjct: 121 ATRNYIGVLTSVNCSATAARAIADYFRRDIHPEVLADYPNIDGVVALTHGQGCALDSQGE 180 Query: 181 PLQILRRTLAGYATHPNFAAVLVVGLGCETNQISGLMESHNLKEGEYFHTFTIQGTGGTA 240 PLQILRRTLAGYATHPNFAAVLVVGLGCETNQISGLMESHNLKEGEYFHTFTIQGTGGTA Sbjct: 181 PLQILRRTLAGYATHPNFAAVLVVGLGCETNQISGLMESHNLKEGEYFHTFTIQGTGGTA 240 Query: 241 KTVALGIEKIKKMLPKANDIKREPVSAKHLTLGLQCGGSDGYSGITANPALGAAVDLLVR 300 KTVALGIEKIKKMLPKANDIKREPVSAKHLTLGLQCGGSDGYSGITANPALGAAVDLLVR Sbjct: 241 KTVALGIEKIKKMLPKANDIKREPVSAKHLTLGLQCGGSDGYSGITANPALGAAVDLLVR 300 Query: 301 HGGTAILSETPEIYGAEHLLTRRAVSPEVGEKLLARIAWWEEYCAKNDAEMNNNPSAGNK 360 HGGTAILSETPEIYGAEHLLTRRAVSPEVGEKLLARIAWWEEYCAKNDAEMNNNPSAGNK Sbjct: 301 HGGTAILSETPEIYGAEHLLTRRAVSPEVGEKLLARIAWWEEYCAKNDAEMNNNPSAGNK 360 Query: 361 AGGLTTILEKSLGAVAKGGTTNLVDVYKYAETVTARGFVFMDTPGYDPISATGQVAGGAN 420 AGGLTTILEKSLGAVAKGGTTNLVDVYKYAE VTARGFVFMDTPGYDPISATGQVAGGAN Sbjct: 361 AGGLTTILEKSLGAVAKGGTTNLVDVYKYAEAVTARGFVFMDTPGYDPISATGQVAGGAN 420 Query: 421 MICFTTGRGSAYGCAPAPSLKLATNTALWQRQEEDMDINCGEIADSNVTPQEVGERFFQM 480 MICFTTGRGSAYGCAPAPSLKLATNTALWQRQEEDMDINCGEIAD NVTPQE+GERFFQM Sbjct: 421 MICFTTGRGSAYGCAPAPSLKLATNTALWQRQEEDMDINCGEIADGNVTPQEIGERFFQM 480 Query: 481 ILDTASGKKTKSELHGYGQDEFVPWHIGVYT 511 ILDTASGKKTKSELHGYGQDEFVPWHIGVYT Sbjct: 481 ILDTASGKKTKSELHGYGQDEFVPWHIGVYT 511 >ref|YP_001632556.1| UxaA family hydrolase [Bordetella petrii DSM 12804] emb|CAP44288.1| Hydrolase, UxaA family [Bordetella petrii] Length = 512 Score = 759 bits (1960), Expect = 0.0, Method: Composition-based stats. Identities = 368/505 (72%), Positives = 428/505 (84%), Gaps = 1/505 (0%) Query: 4 NSPIIRLNPVDDVVIARQQLISGTVLQDEGGLKVQGLIPAGHKMATRAISAGEPVKRYGQ 63 ++P+IR++P D+VVIAR+QL+ GT L EG + V GL+P GHK+A RAI+AG+PV+RY Q Sbjct: 6 DTPVIRIHPADNVVIARRQLVGGTPLPGEG-VTVAGLVPPGHKVAVRAIAAGQPVRRYNQ 64 Query: 64 IIGTASQDIAPGQHVHTHNLAMAEFSREHHFGADVKPVDFVAEPATFMGIVRPDGRVATR 123 +IG A QDI PGQHVHTHNLA ++F R++ G D D+V PATF GIVRPDGRVATR Sbjct: 65 VIGVARQDIVPGQHVHTHNLAFSDFERDYAVGHDAHATDYVDRPATFDGIVRPDGRVATR 124 Query: 124 NYIGVLTSVNCSATAARAIADYFRRDIHPEVLADYPNIDGVVALTHGQGCATDSQGEPLQ 183 NYIGVLTSVNCSAT ARAIAD+FRRDI PE LA YP++DGVVALTHG GCAT S GEPL+ Sbjct: 125 NYIGVLTSVNCSATVARAIADHFRRDIRPEALAAYPHVDGVVALTHGLGCATGSDGEPLR 184 Query: 184 ILRRTLAGYATHPNFAAVLVVGLGCETNQISGLMESHNLKEGEYFHTFTIQGTGGTAKTV 243 +LRRTL GYA H NF A++VVGLGCETNQISGLME L+E TF+IQGTGGT V Sbjct: 185 VLRRTLGGYARHVNFGALMVVGLGCETNQISGLMEQEGLQESGQLQTFSIQGTGGTRHAV 244 Query: 244 ALGIEKIKKMLPKANDIKREPVSAKHLTLGLQCGGSDGYSGITANPALGAAVDLLVRHGG 303 A GIE +++ML AN ++R+PV A HLT+GLQCGGSDGYSGI+ANPALGAAVDLLVRHGG Sbjct: 245 ARGIELVEQMLADANRVQRQPVPASHLTVGLQCGGSDGYSGISANPALGAAVDLLVRHGG 304 Query: 304 TAILSETPEIYGAEHLLTRRAVSPEVGEKLLARIAWWEEYCAKNDAEMNNNPSAGNKAGG 363 AILSETPEIYG EHLLTRRAVSP V +KLLAR+ WWE+YCA+NDAEM+NNPSAGNKAGG Sbjct: 305 AAILSETPEIYGGEHLLTRRAVSPAVADKLLARLRWWEDYCARNDAEMDNNPSAGNKAGG 364 Query: 364 LTTILEKSLGAVAKGGTTNLVDVYKYAETVTARGFVFMDTPGYDPISATGQVAGGANMIC 423 LTTILEKSLGA+AK GTTNLVDV +YAE V ARG VFMDTPGYDP+SATGQVAGGAN+IC Sbjct: 365 LTTILEKSLGAIAKSGTTNLVDVLEYAEPVRARGLVFMDTPGYDPVSATGQVAGGANLIC 424 Query: 424 FTTGRGSAYGCAPAPSLKLATNTALWQRQEEDMDINCGEIADSNVTPQEVGERFFQMILD 483 FTTGRGSAYGCAP+PSLKLATNT LW RQ +D+DINCGE+ D Q +GER F+++LD Sbjct: 425 FTTGRGSAYGCAPSPSLKLATNTELWLRQADDIDINCGEVVDGRSDVQTMGERIFRLMLD 484 Query: 484 TASGKKTKSELHGYGQDEFVPWHIG 508 TASG+++KSE+HGYGQ+EFVPW +G Sbjct: 485 TASGRRSKSEIHGYGQNEFVPWQLG 509 >ref|ZP_06689907.1| fumarate hydratase [Achromobacter piechaudii ATCC 43553] gb|EFF73153.1| fumarate hydratase [Achromobacter piechaudii ATCC 43553] Length = 511 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 361/505 (71%), Positives = 427/505 (84%), Gaps = 1/505 (0%) Query: 4 NSPIIRLNPVDDVVIARQQLISGTVLQDEGGLKVQGLIPAGHKMATRAISAGEPVKRYGQ 63 ++ +IR++P D+VVIAR+QL+SGT ++ EG + VQGL+P GHK+A RAI+AGEPV+RY Q Sbjct: 5 DTAVIRIHPADNVVIARRQLVSGTRIESEG-VTVQGLVPPGHKLAVRAIAAGEPVRRYNQ 63 Query: 64 IIGTASQDIAPGQHVHTHNLAMAEFSREHHFGADVKPVDFVAEPATFMGIVRPDGRVATR 123 IIG A Q IA GQHVHT NL ++F R++ G P D+VA+PATF GIVR DGR+ATR Sbjct: 64 IIGVARQPIAAGQHVHTQNLEFSDFERDYAVGQGAHPTDYVAQPATFEGIVRADGRIATR 123 Query: 124 NYIGVLTSVNCSATAARAIADYFRRDIHPEVLADYPNIDGVVALTHGQGCATDSQGEPLQ 183 NYIG+LTSVNCSAT ARAIAD+FRRDIHP+ LA PN+DGVVALTHG GCAT S+GEPL+ Sbjct: 124 NYIGILTSVNCSATVARAIADHFRRDIHPDALAACPNVDGVVALTHGAGCATGSEGEPLK 183 Query: 184 ILRRTLAGYATHPNFAAVLVVGLGCETNQISGLMESHNLKEGEYFHTFTIQGTGGTAKTV 243 +LRRTL GYA H NF ++VVGLGCETNQI GLME L+E HTF IQ TGGT KTV Sbjct: 184 VLRRTLGGYARHANFGGLMVVGLGCETNQIGGLMEQEGLRESGLLHTFNIQDTGGTRKTV 243 Query: 244 ALGIEKIKKMLPKANDIKREPVSAKHLTLGLQCGGSDGYSGITANPALGAAVDLLVRHGG 303 A GIE +++ML +AN ++R+PV A HLT+GLQCGGSDGYSGI+ANPALGAAVDLLVRHGG Sbjct: 244 ARGIELVEQMLEQANQVRRQPVPASHLTVGLQCGGSDGYSGISANPALGAAVDLLVRHGG 303 Query: 304 TAILSETPEIYGAEHLLTRRAVSPEVGEKLLARIAWWEEYCAKNDAEMNNNPSAGNKAGG 363 TAILSETPEIYG EHLLTRRA + V +KLLAR+ WWE+YC +NDAEM+NNPSAGNKAGG Sbjct: 304 TAILSETPEIYGGEHLLTRRAQTQAVADKLLARVRWWEDYCERNDAEMDNNPSAGNKAGG 363 Query: 364 LTTILEKSLGAVAKGGTTNLVDVYKYAETVTARGFVFMDTPGYDPISATGQVAGGANMIC 423 LTTILEKSLGA+AK GTTNL DV++YAE V RG VFMDTPGYDP+SATGQVAGGAN+IC Sbjct: 364 LTTILEKSLGAIAKSGTTNLTDVFEYAEPVRTRGLVFMDTPGYDPVSATGQVAGGANLIC 423 Query: 424 FTTGRGSAYGCAPAPSLKLATNTALWQRQEEDMDINCGEIADSNVTPQEVGERFFQMILD 483 FTTGRGSAYGCAPAPSLKL+TNTALWQRQ +D+DINCGE+ D + ++GER FQ++L Sbjct: 424 FTTGRGSAYGCAPAPSLKLSTNTALWQRQSDDIDINCGEVVDGAQSVAQMGERIFQLMLQ 483 Query: 484 TASGKKTKSELHGYGQDEFVPWHIG 508 TASG++T+SE HGYGQ+EFVPW +G Sbjct: 484 TASGRRTRSEEHGYGQNEFVPWQLG 508 >ref|YP_003981562.1| D-galactarate dehydratase/altronate hydrolase family protein 4 [Achromobacter xylosoxidans A8] gb|ADP18847.1| D-galactarate dehydratase/altronate hydrolase family protein 4 [Achromobacter xylosoxidans A8] Length = 511 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 362/507 (71%), Positives = 428/507 (84%), Gaps = 1/507 (0%) Query: 2 KANSPIIRLNPVDDVVIARQQLISGTVLQDEGGLKVQGLIPAGHKMATRAISAGEPVKRY 61 + ++ +IR++P D+VVIAR+QL GT L E + V+GL+P GHK+ATRAI+AG+PV+RY Sbjct: 3 ETDNVVIRIHPADNVVIARRQLAGGTRLAGEN-VVVRGLVPPGHKVATRAIAAGQPVRRY 61 Query: 62 GQIIGTASQDIAPGQHVHTHNLAMAEFSREHHFGADVKPVDFVAEPATFMGIVRPDGRVA 121 QIIG A DI G HVHT NL ++F R++ GAD + D+V +PA F GIVR DGRVA Sbjct: 62 NQIIGVARCDIPAGSHVHTQNLEFSDFERDYAVGADARATDYVDKPAQFDGIVRADGRVA 121 Query: 122 TRNYIGVLTSVNCSATAARAIADYFRRDIHPEVLADYPNIDGVVALTHGQGCATDSQGEP 181 TRNYIG+LTSVNCSATAARAIAD+FRRDIHP+VLA YPN+DGVVALTHG GCAT S+GEP Sbjct: 122 TRNYIGILTSVNCSATAARAIADHFRRDIHPDVLAAYPNVDGVVALTHGAGCATGSEGEP 181 Query: 182 LQILRRTLAGYATHPNFAAVLVVGLGCETNQISGLMESHNLKEGEYFHTFTIQGTGGTAK 241 L++LRRTL GYA HPNFA +LV+GLGCETNQI GLME L+E HTF IQ TGGT K Sbjct: 182 LRLLRRTLGGYARHPNFAGLLVLGLGCETNQIGGLMEQEGLRESGLLHTFNIQETGGTRK 241 Query: 242 TVALGIEKIKKMLPKANDIKREPVSAKHLTLGLQCGGSDGYSGITANPALGAAVDLLVRH 301 TV GIE ++ ML +A+ ++R+PV A LT+GLQCGGSDGYSGI+ANPALGAAVDLLVRH Sbjct: 242 TVEHGIELVRAMLAQADQVRRQPVPAGKLTVGLQCGGSDGYSGISANPALGAAVDLLVRH 301 Query: 302 GGTAILSETPEIYGAEHLLTRRAVSPEVGEKLLARIAWWEEYCAKNDAEMNNNPSAGNKA 361 GGTAILSETPEIYG EHLLTRRA +PEV KLLAR+ WWE+YCA+NDAEM+NNPSAGNKA Sbjct: 302 GGTAILSETPEIYGGEHLLTRRAATPEVAAKLLARLRWWEDYCARNDAEMDNNPSAGNKA 361 Query: 362 GGLTTILEKSLGAVAKGGTTNLVDVYKYAETVTARGFVFMDTPGYDPISATGQVAGGANM 421 GGLTTILEKSLGA+AK GTT L DVY+YAETV RG VFMDTPGYDP+SATGQVAGGAN+ Sbjct: 362 GGLTTILEKSLGAIAKSGTTRLADVYEYAETVRERGLVFMDTPGYDPVSATGQVAGGANL 421 Query: 422 ICFTTGRGSAYGCAPAPSLKLATNTALWQRQEEDMDINCGEIADSNVTPQEVGERFFQMI 481 ICFTTGRGSAYGCAPAPSLKL+TNTALWQRQ +D+DINCGE+ D + ++GER F+++ Sbjct: 422 ICFTTGRGSAYGCAPAPSLKLSTNTALWQRQSDDIDINCGEVVDGAQSVAQMGERIFRLM 481 Query: 482 LDTASGKKTKSELHGYGQDEFVPWHIG 508 L+TASG++T+SE HGYGQ+EFVPW +G Sbjct: 482 LETASGRRTRSEEHGYGQNEFVPWQLG 508 >ref|YP_727205.1| altronate dehydratase [Ralstonia eutropha H16] emb|CAJ93837.1| altronate dehydratase [Ralstonia eutropha H16] Length = 522 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 362/505 (71%), Positives = 426/505 (84%), Gaps = 1/505 (0%) Query: 7 IIRLNPVDDVVIARQQLISGTVLQDEGGLKVQGLIPAGHKMATRAISAGEPVKRYGQIIG 66 +IRL+P DDVVIAR QL++GT L DE + V GL+P GHK+ATRAI AGE V+RYGQIIG Sbjct: 19 VIRLHPEDDVVIARDQLVAGTTL-DEEDVTVLGLVPPGHKVATRAIGAGEAVRRYGQIIG 77 Query: 67 TASQDIAPGQHVHTHNLAMAEFSREHHFGADVKPVDFVAEPATFMGIVRPDGRVATRNYI 126 ASQDI PGQHVHTHNLAM +F+R++ +GAD + + V PATF GIVR DGRVATRNYI Sbjct: 78 FASQDIRPGQHVHTHNLAMGDFTRDYAYGADARAPEPVPAPATFAGIVRADGRVATRNYI 137 Query: 127 GVLTSVNCSATAARAIADYFRRDIHPEVLADYPNIDGVVALTHGQGCATDSQGEPLQILR 186 G+LTSVNCSAT ARAIAD+FRRDIHPE LA YPN+DGVVALTHG GCA D QGE L +L+ Sbjct: 138 GILTSVNCSATVARAIADHFRRDIHPEALAAYPNVDGVVALTHGVGCAVDPQGEGLALLQ 197 Query: 187 RTLAGYATHPNFAAVLVVGLGCETNQISGLMESHNLKEGEYFHTFTIQGTGGTAKTVALG 246 RTL GYA HPNFA+VLV+GLGCETNQIS L+ + L + TFTIQ +GGT +T+A G Sbjct: 198 RTLGGYACHPNFASVLVIGLGCETNQISALLATQGLAHDDRLQTFTIQDSGGTTRTIARG 257 Query: 247 IEKIKKMLPKANDIKREPVSAKHLTLGLQCGGSDGYSGITANPALGAAVDLLVRHGGTAI 306 I I++MLP AN ++R+PV A HL +GLQCGGSDGYSGI+ANP LGAAVDLLVRHGGTAI Sbjct: 258 IAMIQEMLPAANAVQRQPVPASHLVVGLQCGGSDGYSGISANPVLGAAVDLLVRHGGTAI 317 Query: 307 LSETPEIYGAEHLLTRRAVSPEVGEKLLARIAWWEEYCAKNDAEMNNNPSAGNKAGGLTT 366 LSETPEIYGAEHLLTRRA +PE+G KL+ARI WWE+YCA++ A M+NNPSAGNKAGGLTT Sbjct: 318 LSETPEIYGAEHLLTRRAQTPEIGRKLVARIRWWEDYCARHGASMDNNPSAGNKAGGLTT 377 Query: 367 ILEKSLGAVAKGGTTNLVDVYKYAETVTARGFVFMDTPGYDPISATGQVAGGANMICFTT 426 +LEKSLG +AKGG+ NL +VY+YA+ V ARG VFMDTPGYDPISATGQVAGGAN+ICFTT Sbjct: 378 VLEKSLGGIAKGGSANLAEVYEYAQPVRARGLVFMDTPGYDPISATGQVAGGANLICFTT 437 Query: 427 GRGSAYGCAPAPSLKLATNTALWQRQEEDMDINCGEIADSNVTPQEVGERFFQMILDTAS 486 GRGSAYGCAP+PS+KLATNTALWQRQ +DMD+NCG + D + T +GE F+++LDTAS Sbjct: 438 GRGSAYGCAPSPSVKLATNTALWQRQSDDMDLNCGAVLDGSATIGGLGEELFRLMLDTAS 497 Query: 487 GKKTKSELHGYGQDEFVPWHIGVYT 511 GK+++SELHGYGQ+EFVPW + T Sbjct: 498 GKRSRSELHGYGQNEFVPWQLSAIT 522