BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5022.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777254.1| hypothetical protein Hsero_3868 [Herbaspiril... 428 e-118 ref|ZP_04952112.1| conserved hypothetical protein [Burkholderia ... 208 5e-52 ref|ZP_04898476.1| conserved hypothetical protein [Burkholderia ... 207 1e-51 ref|ZP_04887745.1| conserved hypothetical protein [Burkholderia ... 206 2e-51 ref|ZP_03793522.1| conserved hypothetical protein [Burkholderia ... 206 2e-51 >ref|YP_003777254.1| hypothetical protein Hsero_3868 [Herbaspirillum seropedicae SmR1] gb|ADJ65346.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 239 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 221/239 (92%), Positives = 234/239 (97%) Query: 1 MKQIKLILKDDIYDSLERDYHNFVRLSTKIDSGFVKPSFDSYLLAKLSENTNFLTEEAVQ 60 MKQIKLILKD+IYDSLERDY NFVR STKIDSGFVKPSFD+YLLAKLSEN+NFLTEEAVQ Sbjct: 1 MKQIKLILKDEIYDSLERDYQNFVRFSTKIDSGFVKPSFDNYLLAKLSENSNFLTEEAVQ 60 Query: 61 HLMLSGQYAWARRAMDKEFPDVVQILIEQAANYGFWIAVRHDWGTEELVNASRAWAGAII 120 HLMLSGQYAWARRAMDK+FPDVVQILIEQAANYGFWIAVRHDWGT+ELV AS+AWA AII Sbjct: 61 HLMLSGQYAWARRAMDKDFPDVVQILIEQAANYGFWIAVRHDWGTDELVAASKAWAMAII 120 Query: 121 KQAKGDETQIDVLASQIKASATNIAVVQERLKTPASQLAHAMVQELRETHIAIEHASGVV 180 KQAKGDE+Q+DVLA+QIKASAT+IAVVQERLKTPASQLAHAMVQELRETHIAIEHASG+V Sbjct: 121 KQAKGDESQVDVLAAQIKASATSIAVVQERLKTPASQLAHAMVQELRETHIAIEHASGMV 180 Query: 181 AREKLGAMRTLLKLGRAYGNVSEKAEQDMMDKLKREKPWLFETGPKGFWGHVAAWWRGV 239 AREKLGAMRTLLKLGRAYGNVSEKAEQDMM+KLKREKPWLF+ GPKGFWGHVAAWWRGV Sbjct: 181 AREKLGAMRTLLKLGRAYGNVSEKAEQDMMEKLKREKPWLFDEGPKGFWGHVAAWWRGV 239 >ref|ZP_04952112.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] gb|EET09131.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] Length = 399 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 114/239 (47%), Positives = 159/239 (66%) Query: 1 MKQIKLILKDDIYDSLERDYHNFVRLSTKIDSGFVKPSFDSYLLAKLSENTNFLTEEAVQ 60 M QI L LKDD SL +DY FVR+S K+D FV PSF+ +L AKL ++ LTE AVQ Sbjct: 138 MGQITLTLKDDTVVSLRKDYDAFVRVSLKLDPQFVTPSFEDFLRAKLLDSMVPLTEHAVQ 197 Query: 61 HLMLSGQYAWARRAMDKEFPDVVQILIEQAANYGFWIAVRHDWGTEELVNASRAWAGAII 120 L+ GQYAWA+R +DKEFPDVV ILI QA ++GF A R +W +EL A R WA A++ Sbjct: 198 RLLQGGQYAWAKRTLDKEFPDVVSILIRQAGDFGFGFASRSEWTPDELAKACRDWAAAVV 257 Query: 121 KQAKGDETQIDVLASQIKASATNIAVVQERLKTPASQLAHAMVQELRETHIAIEHASGVV 180 A+GD +D LA+QIK++ T+I ++ER++TPA +LA ++ Q + E +A E + G V Sbjct: 258 SGAQGDAALVDPLAAQIKSAVTDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSV 317 Query: 181 AREKLGAMRTLLKLGRAYGNVSEKAEQDMMDKLKREKPWLFETGPKGFWGHVAAWWRGV 239 AREKLG +R LL+LG A+G+ ++ Q +M+ L+ KP +F P + +AAW R + Sbjct: 318 AREKLGELRGLLRLGIAHGSFQKQEAQQIMEYLRLLKPEIFIEEPYDIFTRIAAWLRSM 376 >ref|ZP_04898476.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] gb|EDO95563.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] Length = 385 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 114/239 (47%), Positives = 159/239 (66%) Query: 1 MKQIKLILKDDIYDSLERDYHNFVRLSTKIDSGFVKPSFDSYLLAKLSENTNFLTEEAVQ 60 M QI L LKDD SL +DY FVR+S K+D FV PSF+ +L AKL ++ LTE AVQ Sbjct: 124 MGQITLTLKDDTVVSLRKDYDAFVRVSLKLDPQFVTPSFEDFLRAKLLDSMVPLTEHAVQ 183 Query: 61 HLMLSGQYAWARRAMDKEFPDVVQILIEQAANYGFWIAVRHDWGTEELVNASRAWAGAII 120 L+ GQYAWA+R +DKEFPDVV ILI QA ++GF A R +W +EL A R WA A++ Sbjct: 184 RLLQGGQYAWAKRTLDKEFPDVVSILIRQAGDFGFGFASRSEWTPDELAKACRDWAAAVV 243 Query: 121 KQAKGDETQIDVLASQIKASATNIAVVQERLKTPASQLAHAMVQELRETHIAIEHASGVV 180 A+GD +D LA+QIK++ T+I ++ER++TPA +LA ++ Q + E +A E + G V Sbjct: 244 SGAQGDAALVDPLAAQIKSAVTDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSV 303 Query: 181 AREKLGAMRTLLKLGRAYGNVSEKAEQDMMDKLKREKPWLFETGPKGFWGHVAAWWRGV 239 AREKLG +R LL+LG A+G+ ++ Q +M+ L+ KP +F P + +AAW R + Sbjct: 304 AREKLGELRGLLRLGIAHGSFQKQEAQQIMEYLRLLKPEIFIEEPYDIFTRIAAWLRSM 362 >ref|ZP_04887745.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] gb|EDU08729.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] Length = 385 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 114/239 (47%), Positives = 159/239 (66%) Query: 1 MKQIKLILKDDIYDSLERDYHNFVRLSTKIDSGFVKPSFDSYLLAKLSENTNFLTEEAVQ 60 M QI L LKDD SL +DY FVR+S K+D FV PSF+ +L AKL ++ LTE AVQ Sbjct: 124 MGQITLTLKDDTVVSLRKDYDAFVRVSLKLDPQFVTPSFEDFLRAKLLDSMVPLTEHAVQ 183 Query: 61 HLMLSGQYAWARRAMDKEFPDVVQILIEQAANYGFWIAVRHDWGTEELVNASRAWAGAII 120 L+ GQYAWA+R +DKEFPDVV ILI QA ++GF A R +W +EL A R WA A++ Sbjct: 184 RLLQGGQYAWAKRTLDKEFPDVVSILIRQAGDFGFGFASRSEWTPDELAKACRDWAAAVV 243 Query: 121 KQAKGDETQIDVLASQIKASATNIAVVQERLKTPASQLAHAMVQELRETHIAIEHASGVV 180 A+GD +D LA+QIK++ T+I ++ER++TPA +LA ++ Q + E +A E + G V Sbjct: 244 SGAQGDAALVDPLAAQIKSAVTDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSV 303 Query: 181 AREKLGAMRTLLKLGRAYGNVSEKAEQDMMDKLKREKPWLFETGPKGFWGHVAAWWRGV 239 AREKLG +R LL+LG A+G+ ++ Q +M+ L+ KP +F P + +AAW R + Sbjct: 304 AREKLGELRGLLRLGIAHGSFQKQEAQQIMEYLRLLKPEIFIEEPYDIFTRIAAWLRSM 362 >ref|ZP_03793522.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] gb|EEH26149.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] Length = 385 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 114/239 (47%), Positives = 159/239 (66%) Query: 1 MKQIKLILKDDIYDSLERDYHNFVRLSTKIDSGFVKPSFDSYLLAKLSENTNFLTEEAVQ 60 M QI L LKDD SL +DY FVR+S K+D FV PSF+ +L AKL ++ LTE AVQ Sbjct: 124 MGQITLTLKDDTVVSLRKDYDAFVRVSLKLDPQFVTPSFEDFLRAKLLDSMVPLTEHAVQ 183 Query: 61 HLMLSGQYAWARRAMDKEFPDVVQILIEQAANYGFWIAVRHDWGTEELVNASRAWAGAII 120 L+ GQYAWA+R +DKEFPDVV ILI QA ++GF A R +W +EL A R WA A++ Sbjct: 184 RLLQGGQYAWAKRTLDKEFPDVVSILIRQAGDFGFGFASRSEWTPDELAKACRDWAAAVV 243 Query: 121 KQAKGDETQIDVLASQIKASATNIAVVQERLKTPASQLAHAMVQELRETHIAIEHASGVV 180 A+GD +D LA+QIK++ T+I ++ER++TPA +LA ++ Q + E +A E + G V Sbjct: 244 SGAQGDAALVDPLAAQIKSAVTDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSV 303 Query: 181 AREKLGAMRTLLKLGRAYGNVSEKAEQDMMDKLKREKPWLFETGPKGFWGHVAAWWRGV 239 AREKLG +R LL+LG A+G+ ++ Q +M+ L+ KP +F P + +AAW R + Sbjct: 304 AREKLGELRGLLRLGIAHGSFQKQEAQQIMEYLRLLKPEIFIEEPYDIFTRIAAWLRSM 362