BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.5021.p         (172 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003123731.1| hypothetical protein Cpin_4070 [Chitinophaga...    74   1e-11
ref|ZP_08059341.1| hypothetical protein HMPREF9422_0706 [Strepto...    63   2e-08
ref|ZP_02162095.1| Hypothetical cytosolic protein [Kordia algici...    59   3e-07

>ref|YP_003123731.1| hypothetical protein Cpin_4070 [Chitinophaga pinensis DSM 2588]
 gb|ACU61530.1| protein of unknown function DUF1260 [Chitinophaga pinensis DSM
           2588]
          Length = 273

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 1/144 (0%)

Query: 23  EPEWWNYQAQRGDRLTVVKLDMGLRRSFPLSGFPYVVVTRVSYAPGTPDGLPALAEQDRL 82
           +P+W  Y     D+  ++ LD+GLRR  PL+  PY +   V      PDG P   E  +L
Sbjct: 26  QPDWDIYTCHIEDKPAIIGLDLGLRRFAPLTRKPYSIFISVYLKHPRPDGFPHGDEFSKL 85

Query: 83  EALSDQMAAAIGKKTRSIYAGTAFSQGQQQSWFYVTDPNGLEAVVAGVHAQLCQGCKTST 142
             + D +   +     + + G   S G +  +FY ++ +G E  +A   AQ     +   
Sbjct: 86  GVIEDCLVQQLETSLNAHFVGRTISNGVRDFYFYSSNTSGYEESIAEAMAQF-PDYRYEC 144

Query: 143 AILADPAWALYRDQLLPDGETRQR 166
            +  D  W LY D L PD +  QR
Sbjct: 145 GMKEDKTWELYFDYLFPDTQELQR 168


>ref|ZP_08059341.1| hypothetical protein HMPREF9422_0706 [Streptococcus cristatus ATCC
           51100]
 gb|EFX53351.1| hypothetical protein HMPREF9422_0706 [Streptococcus cristatus ATCC
           51100]
 gb|EGU66201.1| TIGR01619 family protein [Streptococcus cristatus ATCC 51100]
          Length = 274

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 25  EWWNYQAQRGDRLTVVKLDMGLRRSFPLSGFPYVVVTRVSYAPGTPD-GLPALAEQDRLE 83
           EW ++     DR+  ++L++ L    P S + Y +  R++     P+ G P   E   L 
Sbjct: 31  EWGSFSTLIDDRMASIRLNLALNSIAPYSSYTYALRLRIAILNVDPETGFPDYDEFSNLN 90

Query: 84  ALSDQMAAAIGKKTRSIYAGTAFSQGQQQSWFYVTDPNGLEAVVAGVHAQLCQGCKTSTA 143
            + D+++ A+ K+  +IY G   + G  + ++Y+ D      ++A V  Q  +  + ++A
Sbjct: 91  LIEDRLSEAM-KRIAAIYVGVVITDGHIEFYYYLRDRERHMPIIAQVMEQFSK-YQYNSA 148

Query: 144 ILADPAWALYRDQLLPD 160
            L DP W  Y D L P+
Sbjct: 149 TLVDPEWKQYFDFLYPN 165


>ref|ZP_02162095.1| Hypothetical cytosolic protein [Kordia algicida OT-1]
 gb|EDP96369.1| Hypothetical cytosolic protein [Kordia algicida OT-1]
          Length = 270

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 1/146 (0%)

Query: 20  QDPEPEWWN-YQAQRGDRLTVVKLDMGLRRSFPLSGFPYVVVTRVSYAPGTPDGLPALAE 78
           Q  E   WN YQA++   ++   L M L    P++G+ ++   ++ Y        P   +
Sbjct: 18  QAQETAVWNTYQAKQEKGVSSTNLRMDLIDKAPINGYDFLFYIKIKYRVTKESDFPVGNK 77

Query: 79  QDRLEALSDQMAAAIGKKTRSIYAGTAFSQGQQQSWFYVTDPNGLEAVVAGVHAQLCQGC 138
             ++  + D +   +     + Y G+    G +  ++YV D  G+E  +  +     +G 
Sbjct: 78  LKKMYLIKDAITDRMNSVGDNYYVGSFMYDGSRFEYYYVKDATGIERQIDKLFKNKFRGE 137

Query: 139 KTSTAILADPAWALYRDQLLPDGETR 164
           K    + ADP+W LY + L P+ E +
Sbjct: 138 KYDVFVKADPSWDLYINFLYPNDEIK 163