BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5010.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777248.1| D-2-hydroxyacid dehydrogenase [Herbaspirillu... 529 e-148 ref|YP_550337.1| D-isomer specific 2-hydroxyacid dehydrogenase [... 340 2e-91 gb|EGL73439.1| hypothetical protein CSE899_06142 [Cronobacter sa... 329 4e-88 ref|YP_001439986.1| hypothetical protein ESA_03964 [Cronobacter ... 324 9e-87 ref|YP_003208413.1| Glyoxylate reductase [Cronobacter turicensis... 323 2e-86 >ref|YP_003777248.1| D-2-hydroxyacid dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65340.1| D-2-hydroxyacid dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 316 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 277/316 (87%), Positives = 299/316 (94%) Query: 1 MTSSSRPVVLIVARLPQHLLDLLQQNFTCHNLILDPLTDEALAAIAPQVRGIAANGEAKV 60 MT+++RP VLIVARLPQHLLDLLQQ++TCHNLIL P ++ LAAIAPQ+RGIAANGEAKV Sbjct: 1 MTTNNRPHVLIVARLPQHLLDLLQQHYTCHNLILQPHSEAELAAIAPQIRGIAANGEAKV 60 Query: 61 GREFMARFPALEIVSVFGVGYDGVDVPAARERGIHVTHTPDVLTEDVADMAIALMLAVAR 120 REFMARFPALEIVSVFGVGYDGVDVPAARERGIHVTHTPDVL +DVAD+A+ALMLA AR Sbjct: 61 SREFMARFPALEIVSVFGVGYDGVDVPAARERGIHVTHTPDVLNDDVADLAMALMLATAR 120 Query: 121 NVVRADRFARSGEWKKGPFPFTTKVSGARLGIVGLGRIGQAIAQRAAAFDMQIAYHNRSR 180 NVVRADRFARSGEWKKGPFPFTTKVSGARLGIVGLGRIGQAIA+RAAAFDMQI+YHNRSR Sbjct: 121 NVVRADRFARSGEWKKGPFPFTTKVSGARLGIVGLGRIGQAIAKRAAAFDMQISYHNRSR 180 Query: 181 KDVPYTYVEDIVSLAREVDFLVMITPGGAGTRALVNAEVLEALGPKGFLINVARGSVVDE 240 KDVPYTYV+ I +LAREVDFLVMITPGGAGTRALVNAEVLEALGPKGFLINVARGSVVDE Sbjct: 181 KDVPYTYVDSITALAREVDFLVMITPGGAGTRALVNAEVLEALGPKGFLINVARGSVVDE 240 Query: 241 KALIAALQAGTIAGAGLDVFENEPNIPAELAALENVVLTPHMASGTLVTRTAMAELAFTN 300 ALIAAL+ G IAGAGLDVF +EPN+PAELAAL+NVVLTPHMASGTLVTRTAMA+LAF N Sbjct: 241 AALIAALKTGVIAGAGLDVFADEPNVPAELAALDNVVLTPHMASGTLVTRTAMADLAFNN 300 Query: 301 LQAHFSGKPVVTPVPD 316 LQAHFSG V++PVPD Sbjct: 301 LQAHFSGAGVISPVPD 316 >ref|YP_550337.1| D-isomer specific 2-hydroxyacid dehydrogenase [Polaromonas sp. JS666] gb|ABE45439.1| D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein [Polaromonas sp. JS666] Length = 315 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 190/315 (60%), Positives = 236/315 (74%), Gaps = 6/315 (1%) Query: 5 SRPVVLIVARLPQHLLDLLQQNFTCHNLI--LDPLTDEALAAIAPQVRGIAANGEAKVGR 62 S+P +L VA+LP +L++ L++ F H I DP A A + G +GE+KV R Sbjct: 2 SKPEILAVAKLPPYLIEPLREIFVVHEQIHQTDPAAFAAAAGRIRAIVG---SGESKVPR 58 Query: 63 EFMARFPALEIVSVFGVGYDGVDVPAARERGIHVTHTPDVLTEDVADMAIALMLAVARNV 122 MA+ PALE++S+ GVGYDGVDV AA ER I VTHTP VL +DVAD+AI LML+VAR + Sbjct: 59 SLMAQLPALEMISIMGVGYDGVDVTAALERNIRVTHTPGVLNDDVADLAIGLMLSVARRI 118 Query: 123 VRADRFARSGEWKKGPFPFTTKVSGARLGIVGLGRIGQAIAQRAAAFDMQIAYHNRSRK- 181 +AD++ RSG W +GP P KVSG RLGIVGLGRIGQAIA RA AF M +AY RSRK Sbjct: 119 PQADQYVRSGRWPEGPMPLARKVSGERLGIVGLGRIGQAIATRAEAFGMSVAYTARSRKA 178 Query: 182 DVPYTYVEDIVSLAREVDFLVMITPGGAGTRALVNAEVLEALGPKGFLINVARGSVVDEK 241 ++PY Y +LA EVDFLV+ITPGGAGTR L+NA+VL+ALGP+G+LINVARGSVVDE Sbjct: 179 ELPYAYYPSAQALAAEVDFLVLITPGGAGTRKLINADVLKALGPQGYLINVARGSVVDEA 238 Query: 242 ALIAALQAGTIAGAGLDVFENEPNIPAELAALENVVLTPHMASGTLVTRTAMAELAFTNL 301 AL+ ALQ G IAGA LDVFENEP +P+ L L+NVVL PH+ S T TR AMA+LA +NL Sbjct: 239 ALVEALQQGVIAGAALDVFENEPVVPSALWTLDNVVLAPHIGSATRQTRGAMADLAASNL 298 Query: 302 QAHFSGKPVVTPVPD 316 +AHF+G+P++TPVP+ Sbjct: 299 RAHFAGEPLLTPVPE 313 >gb|EGL73439.1| hypothetical protein CSE899_06142 [Cronobacter sakazakii E899] Length = 310 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 179/311 (57%), Positives = 223/311 (71%), Gaps = 3/311 (0%) Query: 6 RPVVLIVARLPQHLLDLLQQNFTCHNLILDPLTDEALAAIAPQVRGIAANGEAKVGREFM 65 +P+VL A LP L L++ + ++D AIA + + NGEA V REF+ Sbjct: 2 KPIVLKHAYLPDALTTGLRERYDLREF--SQMSDADFVAIAGDITALVTNGEAVVTREFI 59 Query: 66 ARFPALEIVSVFGVGYDGVDVPAARERGIHVTHTPDVLTEDVADMAIALMLAVARNVVRA 125 AR PAL +++VFGVGYDGVDV AARERGI VTHTP VLT+DVAD+AI LMLA +R +V A Sbjct: 60 ARLPALSLIAVFGVGYDGVDVAAARERGIAVTHTPGVLTDDVADLAIGLMLATSRRIVAA 119 Query: 126 DRFARSGEWKKGPFPFTTKVSGARLGIVGLGRIGQAIAQRAAAFDMQIAYHNRS-RKDVP 184 +F G W++G F +T KVSGARLGI G+GRIGQAIA+RA AFDM+I Y +R +P Sbjct: 120 QKFIEQGGWQQGGFTWTRKVSGARLGIFGMGRIGQAIARRARAFDMEIRYTSRQPHSALP 179 Query: 185 YTYVEDIVSLAREVDFLVMITPGGAGTRALVNAEVLEALGPKGFLINVARGSVVDEKALI 244 Y +V + LARE DFL++ PGG TR +VNA VLEALGP+G LINVARGSVVDE ALI Sbjct: 180 YRFVPGLAQLARESDFLMLCAPGGDATRGVVNAAVLEALGPQGILINVARGSVVDETALI 239 Query: 245 AALQAGTIAGAGLDVFENEPNIPAELAALENVVLTPHMASGTLVTRTAMAELAFTNLQAH 304 AAL++G IAGAGLDVF +EPN+PA L +NVV+TPHMAS T TR M+ L N+ A Sbjct: 240 AALESGKIAGAGLDVFTDEPNVPAPLQQRDNVVITPHMASATWETRREMSRLVLENVNAW 299 Query: 305 FSGKPVVTPVP 315 +G+P++TPVP Sbjct: 300 CAGEPLITPVP 310 >ref|YP_001439986.1| hypothetical protein ESA_03964 [Cronobacter sakazakii ATCC BAA-894] gb|ABU79150.1| hypothetical protein ESA_03964 [Cronobacter sakazakii ATCC BAA-894] Length = 310 Score = 324 bits (831), Expect = 9e-87, Method: Composition-based stats. Identities = 177/311 (56%), Positives = 221/311 (71%), Gaps = 3/311 (0%) Query: 6 RPVVLIVARLPQHLLDLLQQNFTCHNLILDPLTDEALAAIAPQVRGIAANGEAKVGREFM 65 +P+VL A LP L L++ + ++D AIA + + NGEA V EF+ Sbjct: 2 KPMVLKHAYLPDALTAELRERYDLREF--SQMSDADFGAIAGDITALVTNGEAVVTGEFI 59 Query: 66 ARFPALEIVSVFGVGYDGVDVPAARERGIHVTHTPDVLTEDVADMAIALMLAVARNVVRA 125 AR PAL +++VFGVGYDGVDV AARERGI VTHTP VLT+DVAD+AI LMLA +R +V A Sbjct: 60 ARLPALSLIAVFGVGYDGVDVAAARERGIAVTHTPGVLTDDVADLAIGLMLATSRRIVAA 119 Query: 126 DRFARSGEWKKGPFPFTTKVSGARLGIVGLGRIGQAIAQRAAAFDMQIAYHNRS-RKDVP 184 +F G W++G F ++ KVSGARLGI G+GRIGQAIA+RA AFDM+I Y R +P Sbjct: 120 QKFIEQGGWQQGGFTWSRKVSGARLGIFGMGRIGQAIARRAQAFDMEIRYTGRQPHSALP 179 Query: 185 YTYVEDIVSLAREVDFLVMITPGGAGTRALVNAEVLEALGPKGFLINVARGSVVDEKALI 244 Y +V + LARE DFL++ PGG TR +VNA VLEALGP+G LINVARGSVVDE ALI Sbjct: 180 YRFVPGLAQLARESDFLMLCAPGGDATRGVVNAAVLEALGPQGILINVARGSVVDETALI 239 Query: 245 AALQAGTIAGAGLDVFENEPNIPAELAALENVVLTPHMASGTLVTRTAMAELAFTNLQAH 304 AAL++G IAGAGLDVF +EPN+PA L +NVV+TPHMAS T TR M+ L N+ A Sbjct: 240 AALESGKIAGAGLDVFTDEPNVPAPLQQRDNVVITPHMASATWETRREMSRLVLENINAW 299 Query: 305 FSGKPVVTPVP 315 +G+P++TPVP Sbjct: 300 CAGEPLITPVP 310 >ref|YP_003208413.1| Glyoxylate reductase [Cronobacter turicensis z3032] emb|CBA26691.1| Glyoxylate reductase [Cronobacter turicensis z3032] Length = 310 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 176/311 (56%), Positives = 222/311 (71%), Gaps = 3/311 (0%) Query: 6 RPVVLIVARLPQHLLDLLQQNFTCHNLILDPLTDEALAAIAPQVRGIAANGEAKVGREFM 65 +P+VL A LP L L++ + ++D + AIA + + NGEA V R F+ Sbjct: 2 KPIVLKHAYLPDALTVELRERYDLREF--SQMSDADVEAIAGDITALVTNGEAVVTRAFI 59 Query: 66 ARFPALEIVSVFGVGYDGVDVPAARERGIHVTHTPDVLTEDVADMAIALMLAVARNVVRA 125 R PAL +++VFGVGYDGVDV AARERGI VTHTP VLT+DVAD+AI LMLA +R +V A Sbjct: 60 TRLPALSLIAVFGVGYDGVDVAAARERGIAVTHTPGVLTDDVADLAIGLMLATSRRIVAA 119 Query: 126 DRFARSGEWKKGPFPFTTKVSGARLGIVGLGRIGQAIAQRAAAFDMQIAYHNRS-RKDVP 184 +F G W++G F +T KVSGARLGI G+GRIGQAIA+RA AFDM I+Y R R +P Sbjct: 120 QKFIEQGGWQQGGFTWTRKVSGARLGIFGMGRIGQAIARRAQAFDMAISYTGRQPRSALP 179 Query: 185 YTYVEDIVSLAREVDFLVMITPGGAGTRALVNAEVLEALGPKGFLINVARGSVVDEKALI 244 Y +V D+ LA+E DFL++ PGG TR +VNA VLEALGP+G LIN+ARGSVV+E ALI Sbjct: 180 YRFVPDLQQLAQESDFLMLCAPGGDATRGVVNAAVLEALGPQGILINIARGSVVNETALI 239 Query: 245 AALQAGTIAGAGLDVFENEPNIPAELAALENVVLTPHMASGTLVTRTAMAELAFTNLQAH 304 AAL+ G IAGAGLDVF +EPN+PA L +NVV+TPHMAS T TR M+ L N+ A Sbjct: 240 AALERGAIAGAGLDVFTDEPNVPAALQQRDNVVITPHMASATWETRREMSRLVLENVNAW 299 Query: 305 FSGKPVVTPVP 315 +G+P++TPVP Sbjct: 300 CTGEPLITPVP 310