BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5004.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777243.1| glutamate/aspartate ABC transporter periplas... 564 e-159 ref|YP_004754627.1| glutamate aspartate periplasmic binding prot... 429 e-118 ref|ZP_08274376.1| Glutamate Aspartate periplasmic binding prote... 418 e-115 ref|YP_001208013.1| glutamate/aspartate ABC transporter substrat... 329 4e-88 ref|NP_774240.1| ABC transporter amino-acid-binding protein [Bra... 323 1e-86 >ref|YP_003777243.1| glutamate/aspartate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ65335.1| ABC-type glutamate/aspartate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 315 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 306/315 (97%), Positives = 311/315 (98%) Query: 1 MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG 60 MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG Sbjct: 1 MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG 60 Query: 61 YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQV 120 YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQV Sbjct: 61 YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQV 120 Query: 121 AFSVTEFVTANKFLSKKSANLKTLDDLKGKTVVSTSGTSNLKQITALNAERNLGMNILAA 180 AFSVTEFVTANKFLSKK+ANLKTL+DLKGKTVVSTSGTSNLKQITALNAERNLGMNILAA Sbjct: 121 AFSVTEFVTANKFLSKKAANLKTLEDLKGKTVVSTSGTSNLKQITALNAERNLGMNILAA 180 Query: 181 KDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPADYQVSSEALSVEPYGLILPKGDND 240 KDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAP DYQVSSEALSVEPYGLILPKGD + Sbjct: 181 KDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPGDYQVSSEALSVEPYGLILPKGDKE 240 Query: 241 FKKVVDEALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPAA 300 FK VVD+ALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPAA Sbjct: 241 FKTVVDDALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPAA 300 Query: 301 YAAVPEAQKNLGKKK 315 YA VPEAQKN+GKKK Sbjct: 301 YAVVPEAQKNMGKKK 315 >ref|YP_004754627.1| glutamate aspartate periplasmic binding protein gltI [Collimonas fungivorans Ter331] gb|AEK63804.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Collimonas fungivorans Ter331] Length = 317 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 230/303 (75%), Positives = 262/303 (86%) Query: 5 KLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQGYSID 64 KL L+G V++ SV A+E TG LKKIKD+GT+TLGVRDSSIPFSYLDDKQSYQGYSID Sbjct: 5 KLVVALLGLGVMVGSVQAQELTGTLKKIKDTGTITLGVRDSSIPFSYLDDKQSYQGYSID 64 Query: 65 LCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQVAFSV 124 LCLKAATAIQK+LGLT+LN+KMVPVTSATRIPLI+NGT D+SCDSATNN ER V+F+ Sbjct: 65 LCLKAATAIQKQLGLTALNVKMVPVTSATRIPLISNGTIDLSCDSATNNAERQKVVSFAP 124 Query: 125 TEFVTANKFLSKKSANLKTLDDLKGKTVVSTSGTSNLKQITALNAERNLGMNILAAKDHA 184 T +VTAN+ L+KKS+N+KTLDDLKGKT+VSTSGTSNLKQ+T LN ERNLGMNILAAKDHA Sbjct: 125 TMYVTANRILAKKSSNIKTLDDLKGKTIVSTSGTSNLKQVTILNGERNLGMNILAAKDHA 184 Query: 185 EAFLMVETGRAAAFVMDDILLSSLAANSKAPADYQVSSEALSVEPYGLILPKGDNDFKKV 244 EAFLMVETGRA AFVMDDILL+SLAA+S+APADY+++ EALSVEPYG+I K D FKK Sbjct: 185 EAFLMVETGRATAFVMDDILLASLAASSRAPADYEITKEALSVEPYGIIERKDDLPFKKA 244 Query: 245 VDEALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPAAYAAV 304 VD AL+ VY I IYAKWF IPPKG+NLNVP+SP+L+A AKPTDS DPAAYAAV Sbjct: 245 VDTALSNVYTSGQINDIYAKWFLKAIPPKGINLNVPISPELKAAFAKPTDSGDPAAYAAV 304 Query: 305 PEA 307 PEA Sbjct: 305 PEA 307 >ref|ZP_08274376.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] gb|EGF32154.1| Glutamate Aspartate periplasmic binding protein precursor gltI [Oxalobacteraceae bacterium IMCC9480] Length = 313 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 220/314 (70%), Positives = 267/314 (85%), Gaps = 1/314 (0%) Query: 1 MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG 60 MKL K+ VL+G+ ++ S+ A+E TG LKKIKDSG +TLGVRDSSIPFSYLDDKQSYQG Sbjct: 1 MKLAKMMLVLIGSGLIASAAQAQE-TGTLKKIKDSGQITLGVRDSSIPFSYLDDKQSYQG 59 Query: 61 YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQV 120 YSID+C+K T+IQK+LG+TSLN+K+ PVTSATRIPL+ANGT D+ C SATNN ER QV Sbjct: 60 YSIDICMKIVTSIQKELGMTSLNVKLNPVTSATRIPLMANGTVDLVCGSATNNIERQKQV 119 Query: 121 AFSVTEFVTANKFLSKKSANLKTLDDLKGKTVVSTSGTSNLKQITALNAERNLGMNILAA 180 +F+ T FVTAN+ L+KKS+N+KTLDD+KGK++VSTSGTSNLKQ+ LN +RNLGMN++ A Sbjct: 120 SFAPTTFVTANRLLAKKSSNIKTLDDMKGKSLVSTSGTSNLKQLVQLNGDRNLGMNVMTA 179 Query: 181 KDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPADYQVSSEALSVEPYGLILPKGDND 240 KDHAEAFLMVETGRA AF MDDILL+SLAA+SK+PADY +++EALS EPYG++L + D Sbjct: 180 KDHAEAFLMVETGRAVAFGMDDILLASLAASSKSPADYSITTEALSTEPYGIMLRREDPA 239 Query: 241 FKKVVDEALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPAA 300 FKK VD A+ ++K DI +IYAKWFQSPIPPKG+NLN+PMS QL+AV+A PTDS DPAA Sbjct: 240 FKKSVDTAVINLFKSGDINRIYAKWFQSPIPPKGINLNIPMSDQLKAVIAHPTDSGDPAA 299 Query: 301 YAAVPEAQKNLGKK 314 YAAVPEAQK KK Sbjct: 300 YAAVPEAQKGSTKK 313 >ref|YP_001208013.1| glutamate/aspartate ABC transporter substrate binding protein [Bradyrhizobium sp. ORS 278] emb|CAL79798.1| glutamate/aspartate ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS 278] Length = 304 Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats. Identities = 173/302 (57%), Positives = 226/302 (74%), Gaps = 1/302 (0%) Query: 1 MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG 60 MK L+L G+ A++ V AE+ TG LK IK++G +TLGVRDSSIPFSYLDD Q G Sbjct: 1 MKQLRLFGLAFAAALCAGQVQAEDLTGTLKTIKETGAITLGVRDSSIPFSYLDDNQKPVG 60 Query: 61 YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQV 120 ++ID+C+ A++K+L L L +K+ PVTS+TRIPL+ANGT D+ C S TNN ER Q+ Sbjct: 61 FAIDICMGIVDAVKKELKLDKLEVKLNPVTSSTRIPLLANGTIDLECGSTTNNAERQKQI 120 Query: 121 AFSVTEFVTANKFLSKKSANLKTLDDLKGKTVVSTSGTSNLKQITALNAERNLGMNILAA 180 +F+ T F+TA++++SKK++N+ +DDLKGK VVST+GT+N+KQ+T NA R LG+NI+ A Sbjct: 121 SFTNTHFLTASRYVSKKASNITKIDDLKGKPVVSTAGTTNIKQLTEANAARGLGINIIPA 180 Query: 181 KDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPADYQVSSEALSV-EPYGLILPKGDN 239 KDHAEAFLMVET RA AFVMDDILL+SL A+SK PA Y +SS+A S EPYG++L K D Sbjct: 181 KDHAEAFLMVETDRAVAFVMDDILLASLVASSKDPAAYVISSDAFSKPEPYGIMLRKDDP 240 Query: 240 DFKKVVDEALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPA 299 FKKVVD A +Y + K+Y KWF IPPKG+NLN P+S +L+A AKP+DS DP Sbjct: 241 QFKKVVDAATAKIYTSGEGAKLYDKWFMQKIPPKGLNLNTPISAELKAEFAKPSDSPDPE 300 Query: 300 AY 301 +Y Sbjct: 301 SY 302 >ref|NP_774240.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52865.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] Length = 303 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 171/302 (56%), Positives = 223/302 (73%), Gaps = 1/302 (0%) Query: 1 MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG 60 MK + G+ + A+ ++S A+E TG LK IKD+G +TLG RDSSIPFSYLDD Q G Sbjct: 1 MKHFRHIGLALAATFVVSQAGAQELTGTLKNIKDTGAITLGFRDSSIPFSYLDDNQKPIG 60 Query: 61 YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQV 120 +++D+C K A++K+L L L +K+ PVTSATRIPL+ANGT D+ C S TNN +R QV Sbjct: 61 FAMDICYKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTIDLECGSTTNNADRQKQV 120 Query: 121 AFSVTEFVTANKFLSKKSANLKTLDDLKGKTVVSTSGTSNLKQITALNAERNLGMNILAA 180 AF+ T F+TA++++ KKS+ LK++DDLKGKTVVST+GT+N+KQ+T N + LG NI+ A Sbjct: 121 AFTNTHFLTASRYVFKKSSGLKSIDDLKGKTVVSTAGTTNIKQLTEANVAKGLGANIIPA 180 Query: 181 KDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPADYQVSSEALSV-EPYGLILPKGDN 239 KDHAE+FLMVET RA AFVMDDILL+SL A SK+P DY +S +A S EPYG++L K D Sbjct: 181 KDHAESFLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDA 240 Query: 240 DFKKVVDEALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPA 299 FKKVVD A +Y + +KIY KWF + IPPKG+NLN P+S +L+ AKPTDS +P Sbjct: 241 PFKKVVDAATAALYTSGEGQKIYEKWFTAKIPPKGLNLNTPISAELKNEFAKPTDSPNPD 300 Query: 300 AY 301 Y Sbjct: 301 DY 302