BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.5000.p (344 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777239.1| dihydroorotase [Herbaspirillum seropedicae S... 679 0.0 ref|YP_001351973.1| dihydroorotase [Janthinobacterium sp. Marsei... 592 e-167 ref|YP_004754623.1| dihydroorotase [Collimonas fungivorans Ter33... 580 e-163 ref|YP_001098587.1| dihydroorotase [Herminiimonas arsenicoxydans... 579 e-163 ref|YP_294690.1| dihydroorotase [Ralstonia eutropha JMP134] >gi|... 553 e-155 >ref|YP_003777239.1| dihydroorotase [Herbaspirillum seropedicae SmR1] gb|ADJ65331.1| dihydroorotase protein [Herbaspirillum seropedicae SmR1] Length = 344 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 333/344 (96%), Positives = 343/344 (99%) Query: 1 MSNVLTITRPDDWHLHLRDGATMQDVLPHTARQFARAIVMPNLKPPVTTTAQAGAYRDRI 60 MSNVLTITRPDDWHLHLRDGATMQDVLPHTARQFARAIVMPNLKPPVTTTAQAGAYR+RI Sbjct: 1 MSNVLTITRPDDWHLHLRDGATMQDVLPHTARQFARAIVMPNLKPPVTTTAQAGAYRERI 60 Query: 61 LAALPAGMSFEPLMVLYLTDNTPPEEIRRAKESGFVKAVKLYPAGATTNSDAGVTDLSKC 120 LAALP GMSFEPLMVLYLTDNTPP+EIRRAKESGFVKAVKLYPAGATTNSDAGVTDLSKC Sbjct: 61 LAALPQGMSFEPLMVLYLTDNTPPDEIRRAKESGFVKAVKLYPAGATTNSDAGVTDLSKC 120 Query: 121 YKTLEVLQEVGMPFLVHGEVTDPEIDLFDREAVFIDRIMKPLRQAMPELKVVFEHITTKE 180 YKTLEVLQEVGMPFLVHGEVTDPEIDLFDREAVFI+RIMKPLRQAMPELKVVFEHITTKE Sbjct: 121 YKTLEVLQEVGMPFLVHGEVTDPEIDLFDREAVFIERIMKPLRQAMPELKVVFEHITTKE 180 Query: 181 AADYVLAGEGPTAATITAHHLLFNRNEIFKGGIRPHYYCLPVLKRETHRKALVAAATSGN 240 AADYVLAGEGPTAATITAHHLLFNRNEIFKGGIRPHYYCLPVLKRETHRKALVAAATSGN Sbjct: 181 AADYVLAGEGPTAATITAHHLLFNRNEIFKGGIRPHYYCLPVLKRETHRKALVAAATSGN 240 Query: 241 DKFFLGTDSAPHAKGAKEHACGCAGCYTALHALELYAQAFDSAGALDKFEAFASFNGPDF 300 +KFFLGTDSAPHAKGAKEHACGCAGCYTALHALELYAQAFDSAGALDKFEAFASFNGPDF Sbjct: 241 NKFFLGTDSAPHAKGAKEHACGCAGCYTALHALELYAQAFDSAGALDKFEAFASFNGPDF 300 Query: 301 YNLPRNTGTVTLQRETWAIPAELPMGDATVVPLSAGEQIHWKMV 344 Y+LPRNTGTVTL+RETW+IPAELPMG+ATVVPLSAGEQ++WKMV Sbjct: 301 YDLPRNTGTVTLKRETWSIPAELPMGEATVVPLSAGEQMNWKMV 344 >ref|YP_001351973.1| dihydroorotase [Janthinobacterium sp. Marseille] gb|ABR88863.1| dihydroorotase, homodimeric type [Janthinobacterium sp. Marseille] Length = 352 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 284/340 (83%), Positives = 309/340 (90%) Query: 5 LTITRPDDWHLHLRDGATMQDVLPHTARQFARAIVMPNLKPPVTTTAQAGAYRDRILAAL 64 +TITRPDDWHLHLRDGAT+ VLP TARQFARAIVMPNLKPPVTTTAQA AYRDRILAAL Sbjct: 13 ITITRPDDWHLHLRDGATIASVLPDTARQFARAIVMPNLKPPVTTTAQALAYRDRILAAL 72 Query: 65 PAGMSFEPLMVLYLTDNTPPEEIRRAKESGFVKAVKLYPAGATTNSDAGVTDLSKCYKTL 124 PAGMSFEPLMVLYLTDNTPPEEI+RAKESG V AVKLYPAGATTNSDAGV+DL+KCYKTL Sbjct: 73 PAGMSFEPLMVLYLTDNTPPEEIQRAKESGAVHAVKLYPAGATTNSDAGVSDLTKCYKTL 132 Query: 125 EVLQEVGMPFLVHGEVTDPEIDLFDREAVFIDRIMKPLRQAMPELKVVFEHITTKEAADY 184 E++Q+VGMPFLVHGEVTDP ID+FDREAVFIDR+MKPLR+ MPELKVVFEHITTK+AA Y Sbjct: 133 EMMQKVGMPFLVHGEVTDPAIDIFDREAVFIDRVMKPLRRDMPELKVVFEHITTKDAAQY 192 Query: 185 VLAGEGPTAATITAHHLLFNRNEIFKGGIRPHYYCLPVLKRETHRKALVAAATSGNDKFF 244 V +G ATITAHHLL+NRNE+FKGGIRPHYYCLPVLKRE HR+ALVAAA SG++KFF Sbjct: 193 VAEADGHVGATITAHHLLYNRNELFKGGIRPHYYCLPVLKREIHRQALVAAAISGSNKFF 252 Query: 245 LGTDSAPHAKGAKEHACGCAGCYTALHALELYAQAFDSAGALDKFEAFASFNGPDFYNLP 304 LGTDSAPHAKG KEHACGCAGCYTALHA+ELY QAFD A ALDK E FASFNGPDFY LP Sbjct: 253 LGTDSAPHAKGLKEHACGCAGCYTALHAMELYTQAFDQADALDKLEQFASFNGPDFYQLP 312 Query: 305 RNTGTVTLQRETWAIPAELPMGDATVVPLSAGEQIHWKMV 344 RNTGT+TLQRE W IPAE+P+G+ T+VPL+ GE I WK V Sbjct: 313 RNTGTITLQREEWQIPAEVPLGNTTLVPLNGGETIGWKFV 352 >ref|YP_004754623.1| dihydroorotase [Collimonas fungivorans Ter331] gb|AEK63800.1| Dihydroorotase [Collimonas fungivorans Ter331] Length = 354 Score = 580 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 275/342 (80%), Positives = 307/342 (89%) Query: 1 MSNVLTITRPDDWHLHLRDGATMQDVLPHTARQFARAIVMPNLKPPVTTTAQAGAYRDRI 60 +++ LTITRPDDWHLHLRDG + VLPH+ARQF RAIVMPNLKPPVTTTAQA AYRDRI Sbjct: 11 LTDTLTITRPDDWHLHLRDGVALAAVLPHSARQFGRAIVMPNLKPPVTTTAQAAAYRDRI 70 Query: 61 LAALPAGMSFEPLMVLYLTDNTPPEEIRRAKESGFVKAVKLYPAGATTNSDAGVTDLSKC 120 LA LP ++FEPLM LYLT+NTPP+EIRRAK+SGFV AVKLYPAGATTNSDAGVTDLSKC Sbjct: 71 LAVLPPDLAFEPLMTLYLTNNTPPDEIRRAKDSGFVHAVKLYPAGATTNSDAGVTDLSKC 130 Query: 121 YKTLEVLQEVGMPFLVHGEVTDPEIDLFDREAVFIDRIMKPLRQAMPELKVVFEHITTKE 180 YKTLEV+QE+GMPFLVHGEVTDP ID+FDREAVFIDR+M+PLR+ MPELKVVFEHITTK+ Sbjct: 131 YKTLEVMQELGMPFLVHGEVTDPAIDIFDREAVFIDRVMQPLRRDMPELKVVFEHITTKD 190 Query: 181 AADYVLAGEGPTAATITAHHLLFNRNEIFKGGIRPHYYCLPVLKRETHRKALVAAATSGN 240 AA YV + GP AAT+TAHHLL+NRNEIFKGGIRPHYYCLPVLKRE HR+ALV A TSG+ Sbjct: 191 AAQYVESAGGPVAATVTAHHLLYNRNEIFKGGIRPHYYCLPVLKREEHRQALVQAVTSGS 250 Query: 241 DKFFLGTDSAPHAKGAKEHACGCAGCYTALHALELYAQAFDSAGALDKFEAFASFNGPDF 300 +FFLGTDSAPH KG KEHACGCAGCYTALHA+ELYAQAFD AGALDK EAFASFNGP F Sbjct: 251 TRFFLGTDSAPHPKGLKEHACGCAGCYTALHAMELYAQAFDQAGALDKLEAFASFNGPAF 310 Query: 301 YNLPRNTGTVTLQRETWAIPAELPMGDATVVPLSAGEQIHWK 342 YNLPRN GTVTL+R+ W +PAELP+G+ T+VPL+ GE I W+ Sbjct: 311 YNLPRNQGTVTLKRQPWTLPAELPLGETTLVPLNGGETIDWQ 352 >ref|YP_001098587.1| dihydroorotase [Herminiimonas arsenicoxydans] emb|CAL60458.1| Dihydroorotase (DHOase) [Herminiimonas arsenicoxydans] Length = 352 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 275/340 (80%), Positives = 306/340 (90%) Query: 5 LTITRPDDWHLHLRDGATMQDVLPHTARQFARAIVMPNLKPPVTTTAQAGAYRDRILAAL 64 +TITRPDDWHLHLRDGAT+ VLP TARQFARAIVMPNLKPPVTTTAQA AYR+RILAAL Sbjct: 13 ITITRPDDWHLHLRDGATIASVLPDTARQFARAIVMPNLKPPVTTTAQAVAYRERILAAL 72 Query: 65 PAGMSFEPLMVLYLTDNTPPEEIRRAKESGFVKAVKLYPAGATTNSDAGVTDLSKCYKTL 124 PAGM FEPLM LYLT+NTPPEEI+RA++SG V AVKLYPAGATTNSDAGV+DLSKCYKTL Sbjct: 73 PAGMQFEPLMTLYLTNNTPPEEIQRARDSGVVHAVKLYPAGATTNSDAGVSDLSKCYKTL 132 Query: 125 EVLQEVGMPFLVHGEVTDPEIDLFDREAVFIDRIMKPLRQAMPELKVVFEHITTKEAADY 184 E +Q++GMPFLVHGEVTDP +D+FDREAVFIDR+M+PLR+ MPELKVVFEHITTK+AA Y Sbjct: 133 EAMQKIGMPFLVHGEVTDPNVDIFDREAVFIDRVMQPLRRDMPELKVVFEHITTKDAAQY 192 Query: 185 VLAGEGPTAATITAHHLLFNRNEIFKGGIRPHYYCLPVLKRETHRKALVAAATSGNDKFF 244 V + AATITAHHLL+NRNEIFKGGIRPHYYCLPVLKRE HR+ALVAAATSG++KFF Sbjct: 193 VAEADRHVAATITAHHLLYNRNEIFKGGIRPHYYCLPVLKRELHRQALVAAATSGSNKFF 252 Query: 245 LGTDSAPHAKGAKEHACGCAGCYTALHALELYAQAFDSAGALDKFEAFASFNGPDFYNLP 304 LGTDSAPH KG KEHACGCAGCYTALHA+ELY QAFD A ALDK E FASFNGPDFY+LP Sbjct: 253 LGTDSAPHPKGLKEHACGCAGCYTALHAMELYTQAFDQADALDKLEQFASFNGPDFYSLP 312 Query: 305 RNTGTVTLQRETWAIPAELPMGDATVVPLSAGEQIHWKMV 344 RNTGT+TL+RE W +P ELP+G+ T+VPL+ GE I WK V Sbjct: 313 RNTGTITLRREEWQVPGELPLGETTLVPLNGGETIGWKFV 352 >ref|YP_294690.1| dihydroorotase [Ralstonia eutropha JMP134] sp|Q475T7|PYRC_RALEJ RecName: Full=Dihydroorotase; Short=DHOase gb|AAZ59846.1| dihydroorotase [Ralstonia eutropha JMP134] Length = 344 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 268/342 (78%), Positives = 294/342 (85%) Query: 1 MSNVLTITRPDDWHLHLRDGATMQDVLPHTARQFARAIVMPNLKPPVTTTAQAGAYRDRI 60 M+ LTITRPDDWHLHLRDGA + VLP TARQF RAI+MPNLKPPVTT QA AYR RI Sbjct: 1 MTQKLTITRPDDWHLHLRDGAALAAVLPDTARQFGRAIIMPNLKPPVTTVEQAQAYRARI 60 Query: 61 LAALPAGMSFEPLMVLYLTDNTPPEEIRRAKESGFVKAVKLYPAGATTNSDAGVTDLSKC 120 LAALPAGMSFEPLM LYLTDNTP EEI AK SGFV VKLYPAGATTNSDAGVTD+ +C Sbjct: 61 LAALPAGMSFEPLMTLYLTDNTPAEEIVAAKASGFVHGVKLYPAGATTNSDAGVTDIRRC 120 Query: 121 YKTLEVLQEVGMPFLVHGEVTDPEIDLFDREAVFIDRIMKPLRQAMPELKVVFEHITTKE 180 LE +Q VG+P LVHGEVTD +ID+FDREAVFIDR+M PLR+ PELKVVFEHITT++ Sbjct: 121 AGALEAMQRVGLPLLVHGEVTDGDIDIFDREAVFIDRVMTPLRRDFPELKVVFEHITTRD 180 Query: 181 AADYVLAGEGPTAATITAHHLLFNRNEIFKGGIRPHYYCLPVLKRETHRKALVAAATSGN 240 AA YV GP ATITAHHLL+NRN IF GGIRPHYYCLPVLKRETHR+ALVAAATSG+ Sbjct: 181 AAQYVRDASGPVGATITAHHLLYNRNAIFTGGIRPHYYCLPVLKRETHREALVAAATSGS 240 Query: 241 DKFFLGTDSAPHAKGAKEHACGCAGCYTALHALELYAQAFDSAGALDKFEAFASFNGPDF 300 D+FFLGTDSAPHA+G KEHACGCAGCYTALHA+ELYA+AFD+AGALDK EAFASFNGP F Sbjct: 241 DRFFLGTDSAPHARGLKEHACGCAGCYTALHAMELYAEAFDAAGALDKLEAFASFNGPAF 300 Query: 301 YNLPRNTGTVTLQRETWAIPAELPMGDATVVPLSAGEQIHWK 342 Y LPRNTGT+TL+RE W +PAELP GDAT+VPL AGE + WK Sbjct: 301 YGLPRNTGTLTLEREDWQLPAELPYGDATLVPLRAGETLRWK 342