BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4999.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777238.1| 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoqui... 380 e-104 ref|YP_004754616.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoqui... 283 8e-75 ref|ZP_08275134.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin... 237 8e-61 ref|YP_001098596.1| putative ubiquinone biosynthesis protein COQ... 237 9e-61 sp|A4G1T0|COQ7_HERAR RecName: Full=2-nonaprenyl-3-methyl-6-metho... 234 4e-60 >ref|YP_003777238.1| 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Herbaspirillum seropedicae SmR1] sp|A2RPN0|COQ7_HERSE RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; AltName: Full=5-demethoxyubiquinone hydroxylase; Short=DMQ hydroxylase emb|CAM32537.1| 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (ubiquinone biosynthesis) protein [Herbaspirillum seropedicae] gb|ADJ65330.1| 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (ubiquinone biosynthesis) protein [Herbaspirillum seropedicae SmR1] Length = 208 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 195/208 (93%), Positives = 203/208 (97%) Query: 1 MQVVDELITDFDKALRVISGVVFESRPNPGRGLPDGVMNEAEKRHAAGLMRVNNVGEVCA 60 MQ VDELI+DFDKALRVI+GVVFESRPNPGRGLPDGVM+EAEKRHAAGLMRVNNVGEVCA Sbjct: 1 MQFVDELISDFDKALRVINGVVFESRPNPGRGLPDGVMSEAEKRHAAGLMRVNNVGEVCA 60 Query: 61 QALYDAQGRFAQTEDIKAAFKRAGIEEEDHLAWTAERLRELGSHTSLLNPLWYGGAYVLG 120 QALYDAQGRFAQ +IK AF RAGIEEEDHLAWTAERLRELGSHTSLLNPLWYGGAYVLG Sbjct: 61 QALYDAQGRFAQKAEIKNAFARAGIEEEDHLAWTAERLRELGSHTSLLNPLWYGGAYVLG 120 Query: 121 SIAARLGDARNLGFVSETERQVEHHLLGHLDKLPAQDNRSRAIVDQMRLDEIEHGQAARD 180 SIAARLGDARNLGFVSETERQVEHHL+GHLDKLPAQDNRSRAIVDQMR+DEIEHGQAARD Sbjct: 121 SIAARLGDARNLGFVSETERQVEHHLMGHLDKLPAQDNRSRAIVDQMRIDEIEHGQAARD 180 Query: 181 LGAAEVPAPVRGLMKAMAKVMTTVAYRI 208 LGAAE+PAPV+GLMKAMAKVMTTVAYRI Sbjct: 181 LGAAEMPAPVKGLMKAMAKVMTTVAYRI 208 >ref|YP_004754616.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Collimonas fungivorans Ter331] gb|AEK63793.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Collimonas fungivorans Ter331] Length = 238 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 146/208 (70%), Positives = 169/208 (81%) Query: 1 MQVVDELITDFDKALRVISGVVFESRPNPGRGLPDGVMNEAEKRHAAGLMRVNNVGEVCA 60 M +D +I DFD ALRVI+G SRPNP DGV++ AE+RH+AGLMRVN+VGEVCA Sbjct: 31 MLFLDRVIADFDNALRVITGQASASRPNPALLAADGVLDAAEQRHSAGLMRVNHVGEVCA 90 Query: 61 QALYDAQGRFAQTEDIKAAFKRAGIEEEDHLAWTAERLRELGSHTSLLNPLWYGGAYVLG 120 QALYDAQGRFAQ + IK F AG EEEDHLAWTAERLRELGSH SLLNPLWY G+Y LG Sbjct: 91 QALYDAQGRFAQGDPIKQQFAAAGREEEDHLAWTAERLRELGSHVSLLNPLWYAGSYALG 150 Query: 121 SIAARLGDARNLGFVSETERQVEHHLLGHLDKLPAQDNRSRAIVDQMRLDEIEHGQAARD 180 ++AARLGD R+L FVSETERQVE HL HL++LP QD +SRAIV+QMR DEI HG AAR Sbjct: 151 TLAARLGDVRSLSFVSETERQVEAHLSSHLEQLPLQDAKSRAIVEQMRDDEIAHGAAARS 210 Query: 181 LGAAEVPAPVRGLMKAMAKVMTTVAYRI 208 LGAAE+P PV+ +M+AM+KVMTTVAY + Sbjct: 211 LGAAEMPRPVQKVMQAMSKVMTTVAYYV 238 >ref|ZP_08275134.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31393.1| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [Oxalobacteraceae bacterium IMCC9480] Length = 209 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 123/202 (60%), Positives = 151/202 (74%) Query: 5 DELITDFDKALRVISGVVFESRPNPGRGLPDGVMNEAEKRHAAGLMRVNNVGEVCAQALY 64 D I FD ALR+I+GV +R +P + D M+E ++RH+AGLMRVN+VGEVCAQALY Sbjct: 6 DNWIAGFDSALRIIAGVAVAARASPALAVEDVAMSEEDRRHSAGLMRVNHVGEVCAQALY 65 Query: 65 DAQGRFAQTEDIKAAFKRAGIEEEDHLAWTAERLRELGSHTSLLNPLWYGGAYVLGSIAA 124 AQG+FA++ + F A EEEDHLAWTAER+ +LGSHTS+LNP+W+ G+Y+LG AA Sbjct: 66 QAQGQFARSAALTGQFAHAAREEEDHLAWTAERIAQLGSHTSVLNPIWFAGSYLLGIAAA 125 Query: 125 RLGDARNLGFVSETERQVEHHLLGHLDKLPAQDNRSRAIVDQMRLDEIEHGQAARDLGAA 184 R GD R+LGFV ETERQVE HL HLD LPA D SRAIV QMR DEI HG AA++LGA+ Sbjct: 126 RAGDKRSLGFVVETERQVEAHLTHHLDTLPATDTMSRAIVLQMRDDEIAHGAAAQELGAS 185 Query: 185 EVPAPVRGLMKAMAKVMTTVAY 206 E+P P R LM ++KVMT AY Sbjct: 186 ELPKPARLLMGVISKVMTRTAY 207 >ref|YP_001098596.1| putative ubiquinone biosynthesis protein COQ7 [Herminiimonas arsenicoxydans] emb|CAL60467.1| Putative ubiquinone biosynthesis protein [Herminiimonas arsenicoxydans] Length = 224 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 130/204 (63%), Positives = 160/204 (78%) Query: 5 DELITDFDKALRVISGVVFESRPNPGRGLPDGVMNEAEKRHAAGLMRVNNVGEVCAQALY 64 D I FD ALRV+SGV SRP+P G+ DGV+++AE+RH+AGLMRVN+VGEVCAQALY Sbjct: 21 DRFIRHFDSALRVMSGVSAASRPSPASGVADGVLDDAERRHSAGLMRVNHVGEVCAQALY 80 Query: 65 DAQGRFAQTEDIKAAFKRAGIEEEDHLAWTAERLRELGSHTSLLNPLWYGGAYVLGSIAA 124 AQ +FA ++ IK F+ AG EEEDHLAWTA+RLRELGSH SLLNPLWY GAY LG++AA Sbjct: 81 QAQAQFAHSDAIKQQFELAGREEEDHLAWTAQRLRELGSHPSLLNPLWYAGAYALGTVAA 140 Query: 125 RLGDARNLGFVSETERQVEHHLLGHLDKLPAQDNRSRAIVDQMRLDEIEHGQAARDLGAA 184 +LGDAR+LGFV ETERQVE HL H+++LP QD +S A+V QM DE+ HG AA+ LGA Sbjct: 141 KLGDARSLGFVVETERQVEAHLNEHMNRLPPQDAKSLAVVAQMSADEVAHGSAAQALGAQ 200 Query: 185 EVPAPVRGLMKAMAKVMTTVAYRI 208 VP + M+A++K+MTT AY I Sbjct: 201 AVPPLAQKGMQAISKIMTTTAYYI 224 >sp|A4G1T0|COQ7_HERAR RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; AltName: Full=5-demethoxyubiquinone hydroxylase; Short=DMQ hydroxylase Length = 211 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 130/204 (63%), Positives = 160/204 (78%) Query: 5 DELITDFDKALRVISGVVFESRPNPGRGLPDGVMNEAEKRHAAGLMRVNNVGEVCAQALY 64 D I FD ALRV+SGV SRP+P G+ DGV+++AE+RH+AGLMRVN+VGEVCAQALY Sbjct: 8 DRFIRHFDSALRVMSGVSAASRPSPASGVADGVLDDAERRHSAGLMRVNHVGEVCAQALY 67 Query: 65 DAQGRFAQTEDIKAAFKRAGIEEEDHLAWTAERLRELGSHTSLLNPLWYGGAYVLGSIAA 124 AQ +FA ++ IK F+ AG EEEDHLAWTA+RLRELGSH SLLNPLWY GAY LG++AA Sbjct: 68 QAQAQFAHSDAIKQQFELAGREEEDHLAWTAQRLRELGSHPSLLNPLWYAGAYALGTVAA 127 Query: 125 RLGDARNLGFVSETERQVEHHLLGHLDKLPAQDNRSRAIVDQMRLDEIEHGQAARDLGAA 184 +LGDAR+LGFV ETERQVE HL H+++LP QD +S A+V QM DE+ HG AA+ LGA Sbjct: 128 KLGDARSLGFVVETERQVEAHLNEHMNRLPPQDAKSLAVVAQMSADEVAHGSAAQALGAQ 187 Query: 185 EVPAPVRGLMKAMAKVMTTVAYRI 208 VP + M+A++K+MTT AY I Sbjct: 188 AVPPLAQKGMQAISKIMTTTAYYI 211