BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4992.p (234 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777233.1| hypothetical protein Hsero_3847 [Herbaspiril... 360 9e-98 ref|YP_001098601.1| putative signal peptide [Herminiimonas arsen... 221 5e-56 ref|YP_001351987.1| hypothetical protein mma_0297 [Janthinobacte... 213 2e-53 ref|YP_004754611.1| hypothetical protein CFU_3965 [Collimonas fu... 195 5e-48 ref|ZP_08275139.1| putative signal peptide containing protein [O... 176 3e-42 >ref|YP_003777233.1| hypothetical protein Hsero_3847 [Herbaspirillum seropedicae SmR1] gb|ADJ65325.1| conserved hypothetical transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 236 Score = 360 bits (924), Expect = 9e-98, Method: Composition-based stats. Identities = 211/236 (89%), Positives = 219/236 (92%), Gaps = 2/236 (0%) Query: 1 MTISAPKMTIKRHLPLPLLILLWTAVVAVGAAAAVWTYQLGRNNLPGLH--GDAGEQIEQ 58 MTISAPKMTIKRHLP PL+ LLW VVAVGAAAAVWTYQLGRN+LPGL GDA EQ+EQ Sbjct: 1 MTISAPKMTIKRHLPWPLMALLWAVVVAVGAAAAVWTYQLGRNHLPGLQLQGDASEQVEQ 60 Query: 59 LSEQVKKLTAENERLQSASNASQNELKIAQTAQATLATQVKNMEAEINRQKEDLAFFDSL 118 LSEQVKKL+AENERLQSASNASQNELKIAQ+AQA LATQVKN+EAEINRQKEDLAFFDSL Sbjct: 61 LSEQVKKLSAENERLQSASNASQNELKIAQSAQAQLATQVKNLEAEINRQKEDLAFFDSL 120 Query: 119 LPTNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNMVQGGKGVTI 178 LPTNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVN+VQGGK I Sbjct: 121 LPTNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNIVQGGKSAII 180 Query: 179 NFPEGNSGDQARYRLAFKYYQRVEGLLTIPEGAIVKSVAVRVLDRGQVRAQQSVDL 234 NFPE NS D ARYRLAFKYYQRVEGLL IPEGA +KSVAVRVLDRGQVRAQQSVDL Sbjct: 181 NFPESNSTDLARYRLAFKYYQRVEGLLNIPEGASIKSVAVRVLDRGQVRAQQSVDL 236 >ref|YP_001098601.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL60472.1| conserved hypothetical protein ; putative exported protein [Herminiimonas arsenicoxydans] Length = 255 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 112/233 (48%), Positives = 168/233 (72%), Gaps = 2/233 (0%) Query: 2 TISAPKMTIKRHLPLPLLILLWTAVVAVGAAAAVWTYQLGRNNLPGLHGDAGEQIEQLSE 61 +ISAP+MTIK HLP PL +++ V+ + AA A+W Y LGR+ G + Q+ ++ E Sbjct: 25 SISAPRMTIKNHLPWPLRVIVIAVVLGLSAAIAMWAYDLGRSFTGLNKGASAPQLAEIQE 84 Query: 62 QVKKLTAENERLQSASNASQNELKIAQTAQATLATQVKNMEAEINRQKEDLAFFDSLLPT 121 Q+K+++AE +R Q+ NA++++L I ++ QA L Q+K +E+E ++ K+DL+FF+SLLPT Sbjct: 85 QIKQISAERDRFQTTVNAAESQLNIERSLQAQLTWQIKTLESENSKLKDDLSFFESLLPT 144 Query: 122 NLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNMVQGGKGVTINFP 181 N G GITI+RFKA+ A P QLRYR+L+MQGG F G+ QL V +VQ GK + P Sbjct: 145 NTGVQGITIRRFKADIAEPGQLRYRLLLMQGGKLVSDFIGHYQLVVTLVQEGKSAIMTLP 204 Query: 182 EGNSGDQARYRLAFKYYQRVEGLLTIPEGAIVKSVAVRVLDRGQVRAQQSVDL 234 + ++ D ++RL+F++YQR+EG+L +PEGA VKSV ++VL++G +RAQQS DL Sbjct: 205 KPDAAD--KFRLSFRHYQRIEGVLALPEGATVKSVQIKVLEKGTMRAQQSTDL 255 >ref|YP_001351987.1| hypothetical protein mma_0297 [Janthinobacterium sp. Marseille] gb|ABR91099.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 251 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 110/233 (47%), Positives = 161/233 (69%), Gaps = 2/233 (0%) Query: 2 TISAPKMTIKRHLPLPLLILLWTAVVAVGAAAAVWTYQLGRNNLPGLHGDAGEQIEQLSE 61 +ISAP+MTIK HLP PL + VV +G A A+W Y LGR+ G Q+ ++ E Sbjct: 21 SISAPRMTIKNHLPWPLRAVFIAIVVGLGGAMAMWAYDLGRSFTGFKPGATSAQLAEVQE 80 Query: 62 QVKKLTAENERLQSASNASQNELKIAQTAQATLATQVKNMEAEINRQKEDLAFFDSLLPT 121 Q+++ +AE ++ ++ NA++++L I ++ QA L+ Q+K +E+E + KEDLAFF+SLLPT Sbjct: 81 QLQQTSAERDKFETTVNAAESQLNIERSLQAQLSRQIKTLESENAKLKEDLAFFESLLPT 140 Query: 122 NLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNMVQGGKGVTINFP 181 + GA GITI+R KAE P QLRYR+L+MQGG F GN QL V +VQ GK + FP Sbjct: 141 DTGAQGITIRRLKAEMVEPAQLRYRLLLMQGGKAGHDFTGNYQLIVTLVQDGKSAMMTFP 200 Query: 182 EGNSGDQARYRLAFKYYQRVEGLLTIPEGAIVKSVAVRVLDRGQVRAQQSVDL 234 + + D +++L+F++YQR+EG IP GA+VKSV ++VL++G +RAQQS +L Sbjct: 201 KPDEVD--KFKLSFRHYQRIEGEFAIPAGAVVKSVQIKVLEKGSLRAQQSSNL 251 >ref|YP_004754611.1| hypothetical protein CFU_3965 [Collimonas fungivorans Ter331] gb|AEK63788.1| conserved hypothetical protein , putative signal peptide [Collimonas fungivorans Ter331] Length = 244 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 109/236 (46%), Positives = 150/236 (63%), Gaps = 3/236 (1%) Query: 1 MTISAPKMTIKRHLPLPLLILLWTAVVAVGAAAAVWTYQLGRNNLPGLHGDAGEQIEQLS 60 M+ISAPKMT+K H P PL L V+ G A A+W Y LGR+ + +Q+ +L+ Sbjct: 10 MSISAPKMTVKSHYPWPLKALFLVLVLGFGGAIALWIYDLGRDFTGHSPAVSKQQLAELN 69 Query: 61 EQVKKLTAENERLQSASNASQNELKIAQTAQATLATQVKNMEAEINRQKEDLAFFDSLLP 120 E+V LTAE +R S NA+++ L I + AQ L Q+K +E + + KEDLAFF+ LLP Sbjct: 70 EKVGALTAERDRFSSTVNAAESRLNIEKAAQEQLGQQIKVLEIQNAKLKEDLAFFEGLLP 129 Query: 121 TNLGAPGITIQRFKAEQAAPNQLRYRVLVMQGGGGTQQFAGNLQLSVNMVQGGKGVTINF 180 G+ GITIQR AE P QLRYR+L+MQGG G F GN+QL V GK + F Sbjct: 130 NATGSQGITIQRLTAELLTPTQLRYRMLIMQGGKGA-NFVGNVQLLVTATVAGKSTVLTF 188 Query: 181 P--EGNSGDQARYRLAFKYYQRVEGLLTIPEGAIVKSVAVRVLDRGQVRAQQSVDL 234 P + ++ +L FKYYQRVE LT+PEGA+VK++ +V+++GQ+RAQQ+ +L Sbjct: 189 PGASATAAEKTASQLDFKYYQRVEAELTLPEGAVVKAIQAKVMEKGQMRAQQTSNL 244 >ref|ZP_08275139.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31398.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] Length = 211 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 95/208 (45%), Positives = 134/208 (64%), Gaps = 1/208 (0%) Query: 27 VAVGAAAAVWTYQLGRNNLPGLHGDAGEQIEQLSEQVKKLTAENERLQSASNASQNELKI 86 +A+G AAA+W Y LGR G + +Q+ KL+AE +R S NAS+++L I Sbjct: 5 IALGGAAALWIYDLGRQ-FTGSGQPVQQNASAYQQQLDKLSAERDRYSSTVNASESQLMI 63 Query: 87 AQTAQATLATQVKNMEAEINRQKEDLAFFDSLLPTNLGAPGITIQRFKAEQAAPNQLRYR 146 ++AQ LA QVK +E E R KEDLAFF+SLLPT G P ++I+R + NQ+RYR Sbjct: 64 ERSAQTQLAAQVKVLETENARLKEDLAFFESLLPTGTGGPEVSIRRLTVDMVGQNQVRYR 123 Query: 147 VLVMQGGGGTQQFAGNLQLSVNMVQGGKGVTINFPEGNSGDQARYRLAFKYYQRVEGLLT 206 +L+MQG G F G LQL+V +Q G+ I FP NS D A+++L F++YQRVEG+LT Sbjct: 124 LLLMQGARGKSDFIGTLQLAVTTLQAGRSTVILFPAANSADAAQFKLGFRHYQRVEGVLT 183 Query: 207 IPEGAIVKSVAVRVLDRGQVRAQQSVDL 234 +P+G +SV R+ ++GQ+R Q S +L Sbjct: 184 LPDGMSARSVQARIYEKGQMRTQASANL 211