BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4988.p (250 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777229.1| phosphomethylpyrimidine kinase [Herbaspirill... 394 e-108 ref|YP_004751448.1| phosphomethylpyrimidine kinase [Collimonas f... 323 1e-86 ref|YP_001354648.1| phosphomethylpyrimidine kinase [Janthinobact... 314 6e-84 ref|YP_001100987.1| hydroxymethylpyrimidine kinase [Herminiimona... 310 1e-82 ref|ZP_08275966.1| Phospho methyl pyrimidine kinase [Oxalobacter... 302 3e-80 >ref|YP_003777229.1| phosphomethylpyrimidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ65321.1| phosphomethylpyrimidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 282 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 230/250 (92%), Positives = 242/250 (96%) Query: 1 MGCHGLSVVTALLIGDTARVEDVQVVDVDWVADQARVILEDMAVAAFKVGALGSIENISV 60 MGCHGLSV+T+LLIGDTARVEDVQVV+VDWVADQARVILEDMAVAAFKVG +GSIENISV Sbjct: 33 MGCHGLSVITSLLIGDTARVEDVQVVEVDWVADQARVILEDMAVAAFKVGNVGSIENISV 92 Query: 61 IAEIVSDYPDVPLILDPFISALANQEDEDDRLIAIRELLIPQATVLICSAGELTRLAETW 120 IAEIVSDYPDVPLILDPF SALANQEDEDDRLIAIRELLIPQAT+++ SAGEL RLAETW Sbjct: 93 IAEIVSDYPDVPLILDPFTSALANQEDEDDRLIAIRELLIPQATLMVASAGELARLAETW 152 Query: 121 REPVPGDALELDAMRIIEMGCEYLLVTNTQTDLQEVANSLFDESGLVRQDAWPRLPGSFV 180 REPVPGDAL LDAMRIIEMGCEYLLVTNTQTDLQE+ANSLFDESGLVRQDAW RLPGSFV Sbjct: 153 REPVPGDALMLDAMRIIEMGCEYLLVTNTQTDLQEIANSLFDESGLVRQDAWQRLPGSFV 212 Query: 181 GAGSTLSAAMAAMLANDLEVPLAASEAQEFTLAALANAQRIGMGKLLPDRYFWARESEDP 240 GAG+TLSAAMAAMLAN LEVPLAA+EAQEFTLAALANAQRIGMGKL+PDRYFWARESEDP Sbjct: 213 GAGTTLSAAMAAMLANGLEVPLAAAEAQEFTLAALANAQRIGMGKLVPDRYFWARESEDP 272 Query: 241 ADLDAPPSIN 250 DLDAPPS+N Sbjct: 273 TDLDAPPSLN 282 >ref|YP_004751448.1| phosphomethylpyrimidine kinase [Collimonas fungivorans Ter331] gb|AEK60625.1| Phosphomethylpyrimidine kinase [Collimonas fungivorans Ter331] Length = 283 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 168/235 (71%), Positives = 202/235 (85%), Gaps = 1/235 (0%) Query: 1 MGCHGLSVVTALLIGDTARVEDVQVVDVDWVADQARVILEDMAVAAFKVGALGSIENISV 60 MGCHGLSV+T++LIGDTAR+ED Q +D DWVADQARV+LEDM VAAFKVGA+GSIE++SV Sbjct: 33 MGCHGLSVITSILIGDTARIEDTQQIDADWVADQARVLLEDMPVAAFKVGAVGSIESVSV 92 Query: 61 IAEIVSDYPDVPLILDPFISALANQ-EDEDDRLIAIRELLIPQATVLICSAGELTRLAET 119 IAEIVSDYP++PLILDPF+SA+ +Q +D +D L AIRELL+PQ TV++ SA EL RLAET Sbjct: 93 IAEIVSDYPEIPLILDPFLSAMPDQGQDSEDLLTAIRELLVPQTTVMLLSAVELARLAET 152 Query: 120 WREPVPGDALELDAMRIIEMGCEYLLVTNTQTDLQEVANSLFDESGLVRQDAWPRLPGSF 179 WREP D + LDAMRIIE+GCEYL VT T T E+ N+LF+++G+VRQD WPR+ GSF Sbjct: 153 WREPSSEDMMSLDAMRIIELGCEYLFVTGTPTPAAEIGNTLFNDTGVVRQDNWPRISGSF 212 Query: 180 VGAGSTLSAAMAAMLANDLEVPLAASEAQEFTLAALANAQRIGMGKLLPDRYFWA 234 GAG+TLSAA+AAMLAN L+VP A SEAQEFTLAA+ AQR+GMGKL+PDRYFWA Sbjct: 213 SGAGTTLSAAIAAMLANGLDVPEAVSEAQEFTLAAVTAAQRLGMGKLIPDRYFWA 267 >ref|YP_001354648.1| phosphomethylpyrimidine kinase [Janthinobacterium sp. Marseille] gb|ABR90013.1| phosphomethylpyrimidine kinase [Janthinobacterium sp. Marseille] Length = 282 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 167/248 (67%), Positives = 205/248 (82%), Gaps = 1/248 (0%) Query: 1 MGCHGLSVVTALLIGDTARVEDVQVVDVDWVADQARVILEDMAVAAFKVGALGSIENISV 60 MGCHGLSV+T+L IGDTAR+ED Q++D DWVADQARV+LEDM VAAFKVGA+GSIEN+S Sbjct: 33 MGCHGLSVITSLFIGDTARIEDTQIIDSDWVADQARVVLEDMPVAAFKVGAVGSIENVSA 92 Query: 61 IAEIVSDYPDVPLILDPFISALANQ-EDEDDRLIAIRELLIPQATVLICSAGELTRLAET 119 IAEIVSDYPD+PLI DPF+S+L +Q D +D L+A RELLIPQ TVLI S EL R+AET Sbjct: 93 IAEIVSDYPDIPLIFDPFLSSLPDQGPDGEDMLMATRELLIPQTTVLILSTVELARMAET 152 Query: 120 WREPVPGDALELDAMRIIEMGCEYLLVTNTQTDLQEVANSLFDESGLVRQDAWPRLPGSF 179 WREP D + +DAMR+IEMGCEY+ VT T +DL +VAN+LFDESG++R D W R+ GS+ Sbjct: 153 WREPSEEDMMAVDAMRLIEMGCEYVFVTGTPSDLTDVANTLFDESGVIRHDNWQRISGSY 212 Query: 180 VGAGSTLSAAMAAMLANDLEVPLAASEAQEFTLAALANAQRIGMGKLLPDRYFWARESED 239 GAG TL+A +AA+LAN L+VP A EAQEFT+A++ANAQR+GMGKL+ DRYFWARE ++ Sbjct: 213 SGAGGTLAATIAALLANGLDVPEAVFEAQEFTIASIANAQRLGMGKLVLDRYFWAREFDE 272 Query: 240 PADLDAPP 247 D+ PP Sbjct: 273 NIDILPPP 280 >ref|YP_001100987.1| hydroxymethylpyrimidine kinase [Herminiimonas arsenicoxydans] emb|CAL62866.1| Putative phosphomethylpyrimidine kinase [Herminiimonas arsenicoxydans] Length = 281 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 165/247 (66%), Positives = 208/247 (84%), Gaps = 1/247 (0%) Query: 1 MGCHGLSVVTALLIGDTARVEDVQVVDVDWVADQARVILEDMAVAAFKVGALGSIENISV 60 MGCHGLSVVTAL IGDTAR+ED+Q++D DWV+DQARV+LEDM VAAFKVGA+GS+EN+S Sbjct: 33 MGCHGLSVVTALFIGDTARIEDMQIIDADWVSDQARVVLEDMPVAAFKVGAVGSVENVSA 92 Query: 61 IAEIVSDYPDVPLILDPFISALANQEDE-DDRLIAIRELLIPQATVLICSAGELTRLAET 119 IAEIVSDYPD+PLI DPF+S+L +Q E +D L+AIRELL+PQ TVL+ S EL R+AET Sbjct: 93 IAEIVSDYPDIPLIFDPFLSSLPDQGAEGEDMLMAIRELLVPQTTVLVLSNVELARMAET 152 Query: 120 WREPVPGDALELDAMRIIEMGCEYLLVTNTQTDLQEVANSLFDESGLVRQDAWPRLPGSF 179 WREP D + +DAMR+IEMGCEY+ VT T ++L +VAN+LFDE G++R D W R+ GS+ Sbjct: 153 WREPSEEDMMAVDAMRLIEMGCEYVFVTGTPSELTDVANTLFDEGGVIRHDNWQRISGSY 212 Query: 180 VGAGSTLSAAMAAMLANDLEVPLAASEAQEFTLAALANAQRIGMGKLLPDRYFWARESED 239 GAG+TL+A +AA+LAN L++P A EAQEFT+A++ANAQR+GMGKL+PDRYFWARES++ Sbjct: 213 SGAGATLAATIAALLANGLDIPEAVFEAQEFTVASIANAQRLGMGKLVPDRYFWARESDE 272 Query: 240 PADLDAP 246 DL P Sbjct: 273 EIDLTPP 279 >ref|ZP_08275966.1| Phospho methyl pyrimidine kinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30566.1| Phospho methyl pyrimidine kinase [Oxalobacteraceae bacterium IMCC9480] Length = 285 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 165/247 (66%), Positives = 206/247 (83%), Gaps = 1/247 (0%) Query: 1 MGCHGLSVVTALLIGDTARVEDVQVVDVDWVADQARVILEDMAVAAFKVGALGSIENISV 60 MGCHGLSV+TAL+I DT ++ED+++ + DWV+DQARV+LEDMAVAAFKV A+GSIEN+SV Sbjct: 33 MGCHGLSVITALMISDTTKIEDMEITESDWVSDQARVVLEDMAVAAFKVSAVGSIENVSV 92 Query: 61 IAEIVSDYPDVPLILDPFISALANQ-EDEDDRLIAIRELLIPQATVLICSAGELTRLAET 119 IAEIVSDYP++PLILDPFI+A+ + +D DD L+A+RELL+PQAT+L+ SAGEL RLAET Sbjct: 93 IAEIVSDYPEIPLILDPFITAIPDDVQDGDDVLMAVRELLLPQATLLLLSAGELDRLAET 152 Query: 120 WREPVPGDALELDAMRIIEMGCEYLLVTNTQTDLQEVANSLFDESGLVRQDAWPRLPGSF 179 WREP D LE+DA+ +IE+GC +LLVT T QEV N+L+ + G++RQD WPRLPG+F Sbjct: 153 WREPTVEDTLEVDALHVIELGCAFLLVTGTPGAAQEVTNTLYSDGGVIRQDNWPRLPGAF 212 Query: 180 VGAGSTLSAAMAAMLANDLEVPLAASEAQEFTLAALANAQRIGMGKLLPDRYFWARESED 239 GAGST+SAA+AA++AN LE P A EAQEFT AAL AQR+GMGKL+PDRYFWARE+ Sbjct: 213 TGAGSTMSAAIAALMANGLEAPEAVFEAQEFTHAALLGAQRLGMGKLIPDRYFWAREAMQ 272 Query: 240 PADLDAP 246 D DAP Sbjct: 273 DIDADAP 279