BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4987.p         (50 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_334545.1| rubredoxin [Burkholderia pseudomallei 1710b] >g...   103   9e-21
ref|YP_003777228.1| rubredoxin protein [Herbaspirillum seropedic...    96   2e-18
ref|YP_620265.1| rubredoxin-type Fe(Cys)4 protein [Burkholderia ...    95   3e-18
ref|YP_004751449.1| Rubredoxin [Collimonas fungivorans Ter331] >...    93   1e-17
ref|YP_557237.1| rubredoxin [Burkholderia xenovorans LB400] >gi|...    91   5e-17

>ref|YP_334545.1| rubredoxin [Burkholderia pseudomallei 1710b]
 gb|ABA47922.1| Rubredoxin [Burkholderia pseudomallei 1710b]
          Length = 91

 Score =  103 bits (257), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 48/50 (96%), Positives = 49/50 (98%)

Query: 1  MCLICGWIYDEEAGLPEEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 50
          MCLICGWIYDEEAGLPEEGIAPGTRW+DVPINWTCPECGARKEDFEMV I
Sbjct: 42 MCLICGWIYDEEAGLPEEGIAPGTRWEDVPINWTCPECGARKEDFEMVQI 91


>ref|YP_003777228.1| rubredoxin protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ65320.1| rubredoxin protein [Herbaspirillum seropedicae SmR1]
          Length = 61

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/50 (98%), Positives = 50/50 (100%)

Query: 1  MCLICGWIYDEEAGLPEEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 50
          MCLICGWIYDEEAGLP+EGIAPGTRWDDVPINWTCPECGARKEDFEMVAI
Sbjct: 12 MCLICGWIYDEEAGLPDEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 61


>ref|YP_620265.1| rubredoxin-type Fe(Cys)4 protein [Burkholderia cenocepacia AU
          1054]
 ref|YP_772628.1| rubredoxin-type Fe(Cys)4 protein [Burkholderia ambifaria AMMD]
 ref|YP_834508.1| rubredoxin-type Fe(Cys)4 protein [Burkholderia cenocepacia
          HI2424]
 ref|YP_001807464.1| rubredoxin-type Fe(Cys)4 protein [Burkholderia ambifaria MC40-6]
 gb|ABF75292.1| Rubredoxin-type Fe(Cys)4 protein [Burkholderia cenocepacia AU
          1054]
 gb|ABI86294.1| Rubredoxin-type Fe(Cys)4 protein [Burkholderia ambifaria AMMD]
 gb|ABK07615.1| Rubredoxin-type Fe(Cys)4 protein [Burkholderia cenocepacia
          HI2424]
 gb|ACB63248.1| Rubredoxin-type Fe(Cys)4 protein [Burkholderia ambifaria MC40-6]
          Length = 70

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/50 (96%), Positives = 49/50 (98%)

Query: 1  MCLICGWIYDEEAGLPEEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 50
          MCLICGWIYDEEAGLPEEGIAPGTRW+DVPINWTCPECGARKEDFEMV I
Sbjct: 21 MCLICGWIYDEEAGLPEEGIAPGTRWEDVPINWTCPECGARKEDFEMVQI 70


>ref|YP_004751449.1| Rubredoxin [Collimonas fungivorans Ter331]
 gb|AEK60626.1| Rubredoxin [Collimonas fungivorans Ter331]
          Length = 64

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/50 (94%), Positives = 49/50 (98%)

Query: 1  MCLICGWIYDEEAGLPEEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 50
          MCLICGW+YDEEAGLPEEGIAPGT WDDVP+NWTCPECGARKEDFEMVAI
Sbjct: 15 MCLICGWVYDEEAGLPEEGIAPGTLWDDVPMNWTCPECGARKEDFEMVAI 64


>ref|YP_557237.1| rubredoxin [Burkholderia xenovorans LB400]
 ref|ZP_06843133.1| Rubredoxin-type Fe(Cys)4 protein [Burkholderia sp. Ch1-1]
 gb|ABE29185.1| Rubredoxin [Burkholderia xenovorans LB400]
 gb|EFG69326.1| Rubredoxin-type Fe(Cys)4 protein [Burkholderia sp. Ch1-1]
          Length = 56

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/50 (96%), Positives = 49/50 (98%)

Query: 1  MCLICGWIYDEEAGLPEEGIAPGTRWDDVPINWTCPECGARKEDFEMVAI 50
          MCLICGWIYDEEAGLPEEGIAPGTRW+DVPINWTCPECGARKEDFEMV I
Sbjct: 7  MCLICGWIYDEEAGLPEEGIAPGTRWEDVPINWTCPECGARKEDFEMVQI 56