BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4983.p (893 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001354642.1| two-component hybrid sensor and regulator [J... 600 e-169 ref|YP_001100981.1| putative composite two component regulatory ... 596 e-168 ref|YP_004751454.1| chemotaxis protein [Collimonas fungivorans T... 576 e-162 ref|ZP_08273851.1| putative composite two component regulatory (... 575 e-162 ref|YP_003777225.1| CheA-like histidine kinase [Herbaspirillum s... 523 e-146 >ref|YP_001354642.1| two-component hybrid sensor and regulator [Janthinobacterium sp. Marseille] gb|ABR89484.1| two-component hybrid sensor and regulator [Janthinobacterium sp. Marseille] Length = 1901 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 379/802 (47%), Positives = 499/802 (62%), Gaps = 78/802 (9%) Query: 125 APASEPQAPEL--------------IDPLLLPVFLEEAQELIAGIGETLLVLSEGGQPGA 170 AP +EP P+L ID LLPVF+EE ++++ +G+ L Q Sbjct: 1099 APFAEPVYPQLDEELSDPSLLIRDEIDTDLLPVFIEEGRDMLPQMGQAL----RAWQQDL 1154 Query: 171 VDASLLAELARPLHTLKGSARMVGALHLSRCLHDMEGALQRLGE-GSPAPRSVAALLALY 229 + L L+R LHT+KGSARM GA+ L + +H+ME ++ + G P+ ++ LLA Y Sbjct: 1155 GNTLLPQSLSRLLHTVKGSARMAGAMSLGQHMHEMETRIENITHAGHPSAAALEDLLARY 1214 Query: 230 DQSVEHFSTLEQ-GMATLSATGTQ----AAPSALPGTAAA------------------EG 266 DQ + F L+ +SA+ T+ AA + LP +A Sbjct: 1215 DQGLHLFEQLQNTNKPAVSASETKPESAAAKAELPQIHSAMPVTPNKLAPIVPQAGALAA 1274 Query: 267 RLTAPLVRIRTAVLDKLLNQVGEVSISRAQLDNEIGALQGDARALGEQLGKLAEQPGQLQ 326 APLVR+R +LD+L+NQ GEVSISR++L+ E+G L+ L E + +L EQ +++ Sbjct: 1275 TAAAPLVRVRADILDRLVNQAGEVSISRSKLETEVGTLRQSMGELSENVVRLREQLREIE 1334 Query: 327 RHCGDTPWVAPPGQDPDSA-APLA---------LAGSMQEALGEALQHQKQLLQRVLKTR 376 ++ + G D PL L M E++ + Q+ L + + Sbjct: 1335 MQ-AESQITSRMGISADREFDPLEFDRFTRLQELTRMMAESVNDVGSVQQNLSRTIDSAS 1393 Query: 377 EGLRQQGRTTRELQQELMHARMVKFNSMEPRMQHLVRQVAAETGKPLVLDLSDCRLQIDR 436 L Q R TR+LQQ+LM RMV+F S+ R+ + RQ + ET K + LD+ ++IDR Sbjct: 1394 TDLTTQARLTRDLQQDLMRVRMVQFASISERLFRVTRQASKETDKRVNLDIRGSAVEIDR 1453 Query: 437 AILERLMGPLEHLLRNAAVHGIEGAEQRLAAGKDAVGRLLLEVRQEGNEAMIRLSDDGQG 496 +LE++ GP EHLLRNA VHGIE E+R AAGK+ G L +E+RQEGNE +I SDDGQG Sbjct: 1454 GVLEKMAGPFEHLLRNAIVHGIESREKRQAAGKNETGELRIEIRQEGNEVVIHFSDDGQG 1513 Query: 497 LDLARIHEKALLLGLIDPHHRLSDAELTSIIFHPGFSTNSNVTAIAGRGVGMDVVRSEVA 556 L+L I KAL GL+ LSD+E T +IFHPGFST +T +AGRG+GMDVVRSE A Sbjct: 1514 LNLDNIRNKALSSGLLTEDMALSDSETTDLIFHPGFSTAEEITELAGRGIGMDVVRSEAA 1573 Query: 557 SLGGRISIATIAGKGAQFIIHLPLSLAVAQVVLLELDQQSYAIPSLLVEQVLQIKRADQD 616 SLGGR++IA+ AGKGA F IHLPL+LAV QVVLL ++YAIPS+LVEQV Q+K Sbjct: 1574 SLGGRVAIASEAGKGANFTIHLPLTLAVTQVVLLSTGGKTYAIPSVLVEQVQQLKTGPLA 1633 Query: 617 RVLREGLLEWQGRALPLHYLSALLGDERNIP-QQQALPVLVIKSGHDFLAILVDRIVGNR 675 EG + WQ + +P+HYLS+LLGD + P QQ P+L++KSG++ +A+ VD I+GNR Sbjct: 1634 AAYNEGAVMWQSQRVPMHYLSSLLGDLQVAPVTQQYSPLLILKSGNERVALHVDEILGNR 1693 Query: 676 EVVTKSIGPQLTGMTGVVGATVLGSGSIVLILNPIQLAQRQGYQRMLRREQLQGAD---- 731 EVV K+IGPQL+ M G+ GATVLGSG IVLILNP+ LAQR + +R +L +D Sbjct: 1694 EVVVKNIGPQLSRMIGIAGATVLGSGEIVLILNPVPLAQRAALEN-IRAPRLTPSDAPDG 1752 Query: 732 -------------------GGVSRKIVLVVDDSLTVRRVMHRLLTREGYQVVLATDGVDA 772 G ++ IV+VVDDSLTVRRV RLLTREGYQVVLA DGVDA Sbjct: 1753 MGAIAEMVDSNLQSAARVQGLRTQSIVMVVDDSLTVRRVTQRLLTREGYQVVLAKDGVDA 1812 Query: 773 LHQMQAVRPDIVLLDIEMPRMDGFDLTRNIRDMAATATLPIIMITSRTAAKHRERAMELG 832 L +Q+V PD++L+DIEMPRMDGFDLTRNIRD T +PIIMITSRTA+KHR AMELG Sbjct: 1813 LQHLQSVTPDVMLVDIEMPRMDGFDLTRNIRDDERTRDIPIIMITSRTASKHRNYAMELG 1872 Query: 833 VNAYLGKPYQDDVLLNLIHGLI 854 VN YLGKPYQ+DVLL LI G + Sbjct: 1873 VNEYLGKPYQEDVLLELIAGFV 1894 >ref|YP_001100981.1| putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein [Herminiimonas arsenicoxydans] emb|CAL62860.1| Putative chemotaxis protein histidine kinase [Herminiimonas arsenicoxydans] Length = 1969 Score = 596 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 380/816 (46%), Positives = 493/816 (60%), Gaps = 93/816 (11%) Query: 125 APASEPQAP----ELIDPLL----------LPVFLEEAQELIAGIGETLLVLSEGGQPGA 170 AP EP P EL DP L LPVF+EE +++ +G+ L Q Sbjct: 1156 APFEEPVYPKDHDELSDPALTIKDEIDIDLLPVFIEEGSDMLPQMGQAL----RAWQQNL 1211 Query: 171 VDASLLAELARPLHTLKGSARMVGALHLSRCLHDMEGALQRLGE-GSPAPRSVAALLALY 229 DA+L + R LHT+KGSARM GA+ L + +H+ME ++ + G P+ +V LLA + Sbjct: 1212 GDAALPQSVLRILHTVKGSARMAGAMLLGQHMHEMETRIENITHAGYPSAAAVEDLLARH 1271 Query: 230 DQSVEHFSTLEQGMATLSATGTQAAPSAL------PGTAAAE------------GRLT-- 269 D ++ F L+ A QA+ +A+ P AAAE R T Sbjct: 1272 DHGLQLFEQLQNP----DAIRPQASAAAVTDEENTPAPAAAELPVIQSLMPVTDNRTTPI 1327 Query: 270 ----------------APLVRIRTAVLDKLLNQVGEVSISRAQLDNEIGALQGDARALGE 313 PLVR+R +LD+L+NQ GEVSISR++L+ E+G L+ L E Sbjct: 1328 AAEAAAASRTPATATPVPLVRVRADILDRLVNQAGEVSISRSKLETEVGTLRASMGELSE 1387 Query: 314 QLGKLAEQ--------PGQLQRHCGDTPWVAPPGQDPDSAAPLA-LAGSMQEALGEALQH 364 + +L EQ Q+ H G + + D L L M E++ + Sbjct: 1388 NVIRLREQLREIEMQAESQITSHMGVSSDREFDPLEFDRFTRLQELTRMMAESVNDVGSV 1447 Query: 365 QKQLLQRVLKTREGLRQQGRTTRELQQELMHARMVKFNSMEPRMQHLVRQVAAETGKPLV 424 Q+ L + + L Q R TR+LQQ+LM RMV+F S+ R+ + RQ A E K + Sbjct: 1448 QQNLSRTIDSASTDLTNQARLTRDLQQDLMRVRMVQFASISERLYRVTRQAAKEMDKRVN 1507 Query: 425 LDLSDCRLQIDRAILERLMGPLEHLLRNAAVHGIEGAEQRLAAGKDAVGRLLLEVRQEGN 484 LD+ +++DR++LE++ GP EHLLRNA VHGIE E+R AAGK G L +E+RQEGN Sbjct: 1508 LDIRGSAVEVDRSVLEKMAGPFEHLLRNAIVHGIESREKRRAAGKSETGELRIEIRQEGN 1567 Query: 485 EAMIRLSDDGQGLDLARIHEKALLLGLIDPHHRLSDAELTSIIFHPGFSTNSNVTAIAGR 544 E +I SDDGQGL+L I KAL GL+ LSDAE+T +IFHPGFST +T +AGR Sbjct: 1568 EVVIHFSDDGQGLNLNSIRSKALQNGLVKAEDALSDAEVTDLIFHPGFSTAEEITELAGR 1627 Query: 545 GVGMDVVRSEVASLGGRISIATIAGKGAQFIIHLPLSLAVAQVVLLELDQQSYAIPSLLV 604 G+GMDVVRSE ASLGGR++IA+ GKGA F IHLPL+LAV QVV+L ++YAIPS+LV Sbjct: 1628 GIGMDVVRSEAASLGGRVAIASEPGKGAYFTIHLPLTLAVTQVVILSTGGKTYAIPSVLV 1687 Query: 605 EQVLQIKRADQDRVLREGLLEWQGRALPLHYLSALLGDERNIP-QQQALPVLVIKSGHDF 663 EQV Q+K EG + WQ + +P+HYLSALLGD P QQ P++++KSG D Sbjct: 1688 EQVQQLKNGPLATAYNEGAVMWQSQRVPMHYLSALLGDTDAAPVTQQYSPLMILKSGSDR 1747 Query: 664 LAILVDRIVGNREVVTKSIGPQLTGMTGVVGATVLGSGSIVLILNPIQLAQRQGYQRM-- 721 +A+ VD I+GNREVV K+IGPQL+ M G+ GATVLGSG IVLILNP+ LAQR ++ + Sbjct: 1748 VALHVDEILGNREVVVKNIGPQLSRMIGIAGATVLGSGEIVLILNPVPLAQRVAHENIRA 1807 Query: 722 --LRREQLQGADGGV--------------------SRKIVLVVDDSLTVRRVMHRLLTRE 759 L + G G V ++ IV+VVDDSLTVRRV RLLTRE Sbjct: 1808 PRLTPSDVPGDMGAVAEMATFEPVARRVEPVQGLRTQHIVMVVDDSLTVRRVTQRLLTRE 1867 Query: 760 GYQVVLATDGVDALHQMQAVRPDIVLLDIEMPRMDGFDLTRNIRDMAATATLPIIMITSR 819 GYQVVLA DGVDAL +Q+V PD++L+DIEMPRMDGFDLTRNIRD T +PIIMITSR Sbjct: 1868 GYQVVLAKDGVDALQHLQSVTPDVMLVDIEMPRMDGFDLTRNIRDDERTRDIPIIMITSR 1927 Query: 820 TAAKHRERAMELGVNAYLGKPYQDDVLLNLIHGLIE 855 TA+KHR AMELGVN YLGKPYQ++ L+ LI G I+ Sbjct: 1928 TASKHRNYAMELGVNEYLGKPYQEEALVKLIAGFIK 1963 >ref|YP_004751454.1| chemotaxis protein [Collimonas fungivorans Ter331] gb|AEK60631.1| Chemotaxis protein [Collimonas fungivorans Ter331] Length = 1958 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 368/779 (47%), Positives = 481/779 (61%), Gaps = 63/779 (8%) Query: 136 IDPLLLPVFLEEAQELIAGIGETLLVLSEGGQPGAVDASLLAELARPLHTLKGSARMVGA 195 +D LLPVFLEE +++ IG L + P V S + R LHT+KGSARM GA Sbjct: 1177 LDADLLPVFLEEGSDMLPQIGSALRSWQQ--HPSDVKPS--QAILRHLHTIKGSARMAGA 1232 Query: 196 LHLSRCLHDMEGALQR-LGEGSPAPRSVAALLALYDQSVEHFSTLEQGMATLSATGTQAA 254 + L + +H+ME ++ L GS + +++ LLA YD+ V F L A A Sbjct: 1233 MVLGQHMHEMESHIEVILQSGSSSRQTIDELLAHYDRGVHMFENLRNPQAPQPVAAAVVA 1292 Query: 255 -----------PSALPGTAAAEGRLTA--------PLVRIRTAVLDKLLNQVGEVSISRA 295 PS +P AA + A VR+ VLD+L+NQ GEVSI+R+ Sbjct: 1293 PAPEAHDPVNLPSVMPSLAAGVAPVPAVAATTGLVSQVRVNAEVLDRLVNQAGEVSITRS 1352 Query: 296 QLDNEIGALQGDARALGEQLGKLAEQ--PGQLQRHCGDTPWVAPPGQ---DP---DSAAP 347 +L++ IG LQ L E + +L Q ++Q + + G+ DP D Sbjct: 1353 RLESGIGTLQISLSELTENVDRLRGQLREIEIQAEAQISSRMTLAGEREFDPLEFDRFTR 1412 Query: 348 LA-LAGSMQEALGEALQHQKQLLQRVLKTREGLRQQGRTTRELQQELMHARMVKFNSMEP 406 L L M E++ + QK L V L Q R TR+LQQ+LMH RMV+F S+ Sbjct: 1413 LQELTRMMAESVNDVASLQKNLTNTVDGANADLLTQRRLTRDLQQDLMHVRMVQFASIAE 1472 Query: 407 RMQHLVRQVAAETGKPLVLDLSDCRLQIDRAILERLMGPLEHLLRNAAVHGIEGAEQRLA 466 R+ L RQVA E K + LD+ ++IDR++LE+++ P EHLLRNA VHGIE E R A Sbjct: 1473 RLYRLTRQVAKELDKRVNLDIRGGNVEIDRSVLEKMIAPFEHLLRNAIVHGIESREARRA 1532 Query: 467 AGKDAVGRLLLEVRQEGNEAMIRLSDDGQGLDLARIHEKALLLGLIDPHHRLSDAELTSI 526 AGK+ G L +E+RQ+GNE +I+LSDDGQGL+L RI +KA +GL++ ++SD E T + Sbjct: 1533 AGKNETGELKIEIRQDGNEILIQLSDDGQGLNLQRIRDKARTIGLLENDEQISDLETTDL 1592 Query: 527 IFHPGFSTNSNVTAIAGRGVGMDVVRSEVASLGGRISIATIAGKGAQFIIHLPLSLAVAQ 586 IF PGFST +++T +AGRGVGMDVVRSE ASLGGR+++++ +G+G F IHLPL+LAV Q Sbjct: 1593 IFRPGFSTAADITELAGRGVGMDVVRSEAASLGGRVAVSSDSGQGTHFTIHLPLTLAVTQ 1652 Query: 587 VVLLELDQQSYAIPSLLVEQVLQIKRADQDRVLREGLLEWQGRALPLHYLSALLGDERNI 646 VVLL +YA+PS LVEQV Q+K +G L WQG +PL YLS LLGD + Sbjct: 1653 VVLLTTGGSTYAVPSALVEQVQQLKVKALAAAYNDGSLIWQGHKVPLQYLSTLLGDTEMV 1712 Query: 647 P-QQQALPVLVIKSGHDFLAILVDRIVGNREVVTKSIGPQLTGMTGVVGATVLGSGSIVL 705 P QQ P+++++SG+D +AI VD IVGNREVV K+IGPQL+ M G+ GATVLGSG IVL Sbjct: 1713 PVAQQYSPIIILRSGNDRVAIHVDEIVGNREVVVKNIGPQLSRMIGIAGATVLGSGDIVL 1772 Query: 706 ILNPIQLAQRQGYQ-----RMLRREQL------------------------QGADGGVSR 736 ILNP+ +A RQ R R+ L Q G S+ Sbjct: 1773 ILNPVPVAMRQLSNAAHELRAPRQSHLATHETLGAVAEMSVSAESDLPQAAQAVQGLRSQ 1832 Query: 737 KIVLVVDDSLTVRRVMHRLLTREGYQVVLATDGVDALHQMQAVRPDIVLLDIEMPRMDGF 796 +V+VVDDSLTVRRV RLL+REGYQVVLA DGVDAL Q+QA+ PD++L+DIEMPRMDGF Sbjct: 1833 NVVMVVDDSLTVRRVTQRLLSREGYQVVLAKDGVDALEQLQAITPDVMLVDIEMPRMDGF 1892 Query: 797 DLTRNIRDMAATATLPIIMITSRTAAKHRERAMELGVNAYLGKPYQDDVLLNLIHGLIE 855 DL+RNIR+ T +PIIMITSRTAAKHR AMELGVN YLGKPYQ+D L++ I I+ Sbjct: 1893 DLSRNIRNDERTRHIPIIMITSRTAAKHRSYAMELGVNEYLGKPYQEDELISTIKSFIK 1951 >ref|ZP_08273851.1| putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32687.1| putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein [Oxalobacteraceae bacterium IMCC9480] Length = 1331 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 365/764 (47%), Positives = 484/764 (63%), Gaps = 52/764 (6%) Query: 123 PLAPASEPQAPELIDPLLLPVFLEEAQELIAGIGETLLVLSEGGQPGAVDASLLAELARP 182 P +P + P + EL D LLP+FLEE ++++ +G L G Q +L + R Sbjct: 573 PSSPVTLPASDEL-DADLLPIFLEEGRDMLPQMGTAL----RGWQNELTSTALPQSVLRL 627 Query: 183 LHTLKGSARMVGALHLSRCLHDMEGALQRL-GEGSPAPRSVAALLALYDQSVEHFSTLEQ 241 LHT+KGSARM GA+ L + LHD E ++ L G P ++ ALLA +D S+ F L Sbjct: 628 LHTIKGSARMAGAMQLGQYLHDTESQIETLLHAGQPQHAALDALLARHDHSLYLFDLLHN 687 Query: 242 GMATLSATGTQAA-----------PSALPGTAAAEGRLTAPLVRIRTAVLDKLLNQVGEV 290 A + + A PS +PGT +A +VR+R +LD+L+NQ GEV Sbjct: 688 PAAPVDEVPSSAVVSPPETVAPALPSPVPGTG------SATMVRVRADILDRLVNQAGEV 741 Query: 291 SISRAQLDNEIGALQGDARALGEQLGKLAEQPGQLQRHCGDTPWVAPPGQDPDSA-APLA 349 SISR++L+ E+G L+ L + + +L +Q +++ D+ + PD PL Sbjct: 742 SISRSRLETEVGTLRQSLSELTDNVARLRDQLREIELQ-ADSQITSRRALSPDGEFDPLE 800 Query: 350 ---------LAGSMQEALGEALQHQKQLLQRVLKTREGLRQQGRTTRELQQELMHARMVK 400 L M E++ + Q+ L + V + + Q R TRELQQ+LM RMV Sbjct: 801 FDRYTRLQELTRMMAESVSDVASVQQNLTRTVDEASTEIVTQARLTRELQQDLMRVRMVP 860 Query: 401 FNSMEPRMQHLVRQVAAETGKPLVLDLSDCRLQIDRAILERLMGPLEHLLRNAAVHGIEG 460 F+S+ R+ + RQV+ E K + LD+ ++IDR +LE+++GP EHLLRNA VHGIE Sbjct: 861 FSSIAERLYRVTRQVSKEVDKRVNLDIRGGSVEIDRGVLEKMVGPFEHLLRNAIVHGIEH 920 Query: 461 AEQRLAAGKDAVGRLLLEVRQEGNEAMIRLSDDGQGLDLARIHEKALLLGLIDPHHRLSD 520 EQR AAGK+ G L +E+RQEGNE +++ SDDG GLDL RI KA GL+ +++ Sbjct: 921 REQRRAAGKNETGELRVEIRQEGNEVVLQFSDDGCGLDLQRIRSKAQATGLLAHGREVAE 980 Query: 521 AELTSIIFHPGFSTNSNVTAIAGRGVGMDVVRSEVASLGGRISIATIAGKGAQFIIHLPL 580 AELT +IF+PGFST + VT +AGRG+GMDVVRSE SLGGR++IAT AG+GAQF I LPL Sbjct: 981 AELTDLIFNPGFSTVAEVTELAGRGIGMDVVRSEAGSLGGRVAIATQAGQGAQFTIPLPL 1040 Query: 581 SLAVAQVVLLELDQQSYAIPSLLVEQVLQIKRADQDRVLREGLLEWQGRALPLHYLSALL 640 +LAV QVV+L + YA+PS+LVEQV Q+K +G ++WQG+ +PL YL LL Sbjct: 1041 TLAVTQVVVLRTGDKIYAVPSVLVEQVQQLKATALASAYNDGAIQWQGQRVPLFYLPTLL 1100 Query: 641 GDERNIP-QQQALPVLVIKSGHDFLAILVDRIVGNREVVTKSIGPQLTGMTGVVGATVLG 699 GD + I QQ PV++++SG+D +AI VD I GNREVV K+IGPQL M G+ GATVLG Sbjct: 1101 GDRQTIAVTQQYTPVIILRSGNDRVAIHVDDIQGNREVVVKNIGPQLARMVGIAGATVLG 1160 Query: 700 SGSIVLILNPIQLAQRQGYQRMLRREQL-------------QGADGGVSRKIVLVVDDSL 746 SG IVLILNP+ LAQR +L +L Q G ++ IV+VVDDSL Sbjct: 1161 SGEIVLILNPVPLAQRV----LLETARLPLLDDIGAVADTRQPVPGLRAQSIVMVVDDSL 1216 Query: 747 TVRRVMHRLLTREGYQVVLATDGVDALHQMQAVRPDIVLLDIEMPRMDGFDLTRNIRDMA 806 TVRRV RLL REG+QVVLA DG+DAL Q+Q++ PDI+L+DIEMPRMDGFDLTRN+R Sbjct: 1217 TVRRVTQRLLAREGFQVVLAKDGIDALEQLQSITPDIMLVDIEMPRMDGFDLTRNVRGDE 1276 Query: 807 ATATLPIIMITSRTAAKHRERAMELGVNAYLGKPYQDDVLLNLI 850 T +PIIMITSRTAAKHR AMELGV+AYLGKPYQ+ LL I Sbjct: 1277 RTRAIPIIMITSRTAAKHRNYAMELGVDAYLGKPYQEADLLGEI 1320 >ref|YP_003777225.1| CheA-like histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ65317.1| CheA-like histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 744 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 368/734 (50%), Positives = 461/734 (62%), Gaps = 66/734 (8%) Query: 23 GDERLRETLRPLLAIVRQQSAAWCARLDQQQARPGLPALALRTLAALRDYAGASGATAFA 82 ++ L+ETL+PLL I+RQQ ++W AR+D P P L LRTL A+RD ++GA Sbjct: 19 ANDALQETLQPLLKILRQQGSSWRARVDSGLVCPA-PPLYLRTLTAVRDCTRSAGAADLE 77 Query: 83 SSASALLETLQ-----QQGSD---------GISHAGTRSLLEAGIHSLASQLEGPL---A 125 + ASA+L L+ QG D ++ R + LA+ + P + Sbjct: 78 ACASAILRVLECAQPPGQGLDIPALDIIERAVAALAQRGSNRVALEELAALSQPPRMRSS 137 Query: 126 PASEPQAP---------------ELIDPLLLPVFLEEAQELIAGIGETLLVLSEGGQPGA 170 PA+ AP + +D LLPVFLEEAQEL++ IGE L L +G Sbjct: 138 PAARDTAPAPWLAPREQQWEGLQDELDQALLPVFLEEAQELMSSIGEGLEALRQG----- 192 Query: 171 VDASLLAELARPLHTLKGSARMVGALHLSRCLHDMEGALQRLGEG--------SPAPRSV 222 V + LA LARPLHTLKGSARMVGA LS CLH ME AL+ + G S ++ Sbjct: 193 VADAELAGLARPLHTLKGSARMVGARRLSHCLHQMETALRGVQTGIEGVHDRSSATLAAL 252 Query: 223 AALLALYDQSVEHFSTLEQGMATLSATGTQAAPSALPGTAAAEGRLTAPLVRIRTAVLDK 282 LL L+D +++HF+ L Q LSA G AP L APL+RIRT VLDK Sbjct: 253 ETLLGLHDLALDHFAALTQAALLLSADGGARAPV-----------LPAPLIRIRTTVLDK 301 Query: 283 LLNQVGEVSISRAQLDNEIGALQGDARALGEQLGKLAEQPGQLQRHCGDTPWVAPPGQDP 342 LLNQVGEVSI+R++LDNE+G+LQ +++ALGEQL +L+ + Q R G Sbjct: 302 LLNQVGEVSIARSRLDNEVGSLQSESKALGEQLMRLSGELRQWLRQSGTQAQDGGDAAAA 361 Query: 343 DSAAPLALAGSMQEALGEALQHQKQLLQRVLKTREGLRQQGRTTRELQQELMHARMVKFN 402 A +LA +++A HQ++L + V TREGLRQQ TRELQQELM+ARMVKFN Sbjct: 362 MQALAHSLAARLEQAS----LHQRRLQEGVSSTREGLRQQAAHTRELQQELMYARMVKFN 417 Query: 403 SMEPRMQHLVRQVAAETGKPLVLDLSDCRLQIDRAILERLMGPLEHLLRNAAVHGIEGAE 462 SME RMQHLVRQVAAETGKPL LDLS+CRLQIDRAILERLMGPLEHLLRNAAVHGIE AE Sbjct: 418 SMEVRMQHLVRQVAAETGKPLALDLSNCRLQIDRAILERLMGPLEHLLRNAAVHGIESAE 477 Query: 463 QRLAAGKDAVGRLLLEVRQEGNEAMIRLSDDGQGLDLARIHEKALLLGLIDPHHRLSDAE 522 QRLA GK AVGRL ++ EGNEA+IR+SDDG+GLDL I +KAL LG S A Sbjct: 478 QRLAEGKPAVGRLTVQATHEGNEAVIRVSDDGRGLDLEAIRQKALELGAAG-LAEASQAR 536 Query: 523 LTSIIFHPGFSTNSNVTAIAGRGVGMDVVRSEVASLGGRISIATIAGKGAQFIIHLPLSL 582 L +IF PG ST+ V+A+AGRG+GMDVVRSEVA+LGG + + + G+G QF ++LPLSL Sbjct: 537 LADLIFQPGLSTSPQVSALAGRGIGMDVVRSEVAALGGWMRVHSQPGQGVQFTLYLPLSL 596 Query: 583 AVAQVVLLELDQQSYAIPSLLVEQVLQIKRADQDRVLREGLLEWQGRALPLHYLSALLGD 642 AV V LL QQ +AIPS+LV+ ++Q++ + L E LE QG L LH LL D Sbjct: 597 AVQHVCLLRHGQQHFAIPSMLVDSIVQLRGPQARQALAERSLEHQGSRLALHPWHCLL-D 655 Query: 643 ERNIPQQQ---ALPVLVIKSGHDFLAILVDRIVGNREVVTKSIGPQLTGMTGVVGATVLG 699 E P + + VL+IK +A+L D + GNREVV K +GPQL + GVVGATVLG Sbjct: 656 EAPEPAGEGSDSAYVLLIKRDDGLMAVLADHVSGNREVVVKPVGPQLATLAGVVGATVLG 715 Query: 700 SGSIVLILNPIQLA 713 G IVLI+NP+ LA Sbjct: 716 DGQIVLIINPLLLA 729