BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4979.p (305 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777221.1| drug/metabolite transporter (DMT) superfamil... 471 e-131 ref|YP_004751387.1| putative permease [Collimonas fungivorans Te... 352 6e-95 emb|CAL60501.2| putative permease of the drug/metabolite transpo... 303 3e-80 ref|YP_001352017.1| transporter of the DMT superfamily [Janthino... 298 5e-79 ref|ZP_08274831.1| putative permease of the drug/metabolite tran... 291 1e-76 >ref|YP_003777221.1| drug/metabolite transporter (DMT) superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ65313.1| permease of the drug/metabolite transporter (DMT) superfamily protein [Herbaspirillum seropedicae SmR1] Length = 305 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 261/305 (85%), Positives = 283/305 (92%) Query: 1 MQSLWMLVASFLFSIMGVCVKLSSDYYSTAEVVLCRGIVGVAFIYGLVKIRGGTLRTPYP 60 MQSLWMLVASFLFSIMGVCVKL+SDYYST+E+VLCRG++G++ I LV++RGGT RTP+P Sbjct: 1 MQSLWMLVASFLFSIMGVCVKLASDYYSTSEIVLCRGLIGISVIAALVRVRGGTFRTPFP 60 Query: 61 RDHLIRGGVGVISLWLWFYSFGLLPVATATTLNYMSSIWIAAMLFGVAWWQGHKKFEWGL 120 RDHLIRGGVGVISLWLWFYSF LLPVATATTLNYMSSIWIA MLF AWWQG+KKFEWGL Sbjct: 61 RDHLIRGGVGVISLWLWFYSFSLLPVATATTLNYMSSIWIAVMLFAAAWWQGNKKFEWGL 120 Query: 121 AGTVALSFLGVALLMRPSLNAEQLLGGAISLASGVLSALVYLQVRKLGLLGEPEYRVVFY 180 A TV LSF+GVALLMRPSL+A+QLLGGAISL SGVLSALVYLQVRKLGLLGEPEYRVVFY Sbjct: 121 AATVVLSFIGVALLMRPSLDADQLLGGAISLFSGVLSALVYLQVRKLGLLGEPEYRVVFY 180 Query: 181 FSATGVLAGLVGSVVTGRVPLWHSHSWIGALLVLMIGLTATTAQIAMTRAYRLGNTLVTA 240 FS TGVLAGLVGSV TGRVPLWHSHSW GA LV+MIGLTAT AQIAMTRAYRLGNTLVTA Sbjct: 181 FSLTGVLAGLVGSVATGRVPLWHSHSWQGAALVIMIGLTATLAQIAMTRAYRLGNTLVTA 240 Query: 241 NLQYTGIVFSSLFGVLIWDDAPGWIGWLGMAIILASGMLATYRNQRKSQAVAKNVPKVDP 300 NLQYTGIVFSSLFGVL+W+DAPGW+GWLGM +ILASG+LATY N R SQ A+N+PKVDP Sbjct: 241 NLQYTGIVFSSLFGVLVWNDAPGWLGWLGMGVILASGLLATYHNHRSSQIAARNLPKVDP 300 Query: 301 IATEV 305 IATEV Sbjct: 301 IATEV 305 >ref|YP_004751387.1| putative permease [Collimonas fungivorans Ter331] gb|AEK60564.1| putative permease of the drug/metabolite transporter (DMT) superfamily [Collimonas fungivorans Ter331] Length = 313 Score = 352 bits (902), Expect = 6e-95, Method: Composition-based stats. Identities = 193/291 (66%), Positives = 241/291 (82%), Gaps = 2/291 (0%) Query: 1 MQSLWMLVASFLFSIMGVCVKLSSDYYSTAEVVLCRGIVGVAFIYGLVKIRGGTLRTPYP 60 MQSLWML AS +FSIMGVCVKL++D+YS AE+VL RG++G+ FI L+ ++GGTL+TP P Sbjct: 1 MQSLWMLFASLMFSIMGVCVKLAADHYSIAEIVLSRGLIGMLFIVVLILLKGGTLKTPMP 60 Query: 61 RDHLIRGGVGVISLWLWFYSFGLLPVATATTLNYMSSIWIAAMLFGVAWWQGHKKFEWGL 120 R HL RG +GVI+L +WFYSF LLPVATATTLNY SSIW+AA+LFG AWW+G+ +FEWG+ Sbjct: 61 RQHLWRGVIGVIALSMWFYSFSLLPVATATTLNYTSSIWLAAILFGAAWWRGNSRFEWGM 120 Query: 121 AGTVALSFLGVALLMRPSLNAEQLLGGAISLASGVLSALVYLQVRKLGLLGEPEYRVVFY 180 A T+ LSF+GV LL+RPS +AEQ GG I+LASG+LSA+ YLQVR+LG LGEPEYRVVFY Sbjct: 121 AFTILLSFIGVMLLLRPSFDAEQTSGGMIALASGLLSAVAYLQVRRLGKLGEPEYRVVFY 180 Query: 181 FSATGVLAGLVGSVVT--GRVPLWHSHSWIGALLVLMIGLTATTAQIAMTRAYRLGNTLV 238 FS+T LAGL GS++ G +PLWH HS G L++ + L+AT AQ+AMTRAYRLGN L+ Sbjct: 181 FSSTSALAGLAGSILLSGGGIPLWHPHSAQGLALLITLSLSATLAQMAMTRAYRLGNPLL 240 Query: 239 TANLQYTGIVFSSLFGVLIWDDAPGWIGWLGMAIILASGMLATYRNQRKSQ 289 TANLQYTGIVFSS++G+LIW D W GWLG A+IL SG+LAT+ NQ+K++ Sbjct: 241 TANLQYTGIVFSSIWGILIWHDQMDWRGWLGTAVILISGLLATFYNQKKAR 291 >emb|CAL60501.2| putative permease of the drug/metabolite transporter (DMT) superfamily [Herminiimonas arsenicoxydans] Length = 309 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 182/310 (58%), Positives = 235/310 (75%), Gaps = 6/310 (1%) Query: 1 MQSLWMLVASFLFSIMGVCVKLSSDYYSTAEVVLCRGIVGVAFIYGLVKIRGGTLRTPYP 60 MQ+LWML A+F+FSIMGVCVKL+S+ Y+ AE+V+ RG +G+ FIY L+ +GGTL+T Sbjct: 1 MQALWMLFATFVFSIMGVCVKLASETYTVAEIVMYRGFIGIIFIYALILQQGGTLKTRLA 60 Query: 61 RDHLIRGGVGVISLWLWFYSFGLLPVATATTLNYMSSIWIAAMLFGVAWWQGHKKFEWGL 120 HL R VGV SLWLWF + LLP+ATA TLNYM+ IWI+ +LF +AW G ++FEWGL Sbjct: 61 WQHLWRCVVGVTSLWLWFCAIALLPLATAMTLNYMAPIWISGILFVIAWRSGKRRFEWGL 120 Query: 121 AGTVALSFLGVALLMRPSLNAEQLLGGAISLASGVLSALVYLQVRKLGLLGEPEYRVVFY 180 + +SF G+ LL+RPS++AEQL+G + L SG+LSAL YLQVR LG LGEPE RVVFY Sbjct: 121 VAAIFMSFAGLTLLLRPSIHAEQLIGALLGLCSGILSALAYLQVRHLGQLGEPESRVVFY 180 Query: 181 FSATGVLAGLVGSV---VTG--RVPLWHSHSWIGALLVLMIGLTATTAQIAMTRAYRLGN 235 FSATG +AGL G + +TG L H+ G +L+L IG+ A AQ+AMTRAYRLGN Sbjct: 181 FSATGFVAGLAGCLFDAITGGTTFTLLRPHTSYGLILLLGIGVLAAMAQMAMTRAYRLGN 240 Query: 236 TLVTANLQYTGIVFSSLFGVLIWDDAPGWIGWLGMAIILASGMLATYRNQRKSQAVAKNV 295 LVTANLQYTGIVF+S++G+LIW+D GW+ WLG+ IILASG++AT+ N R S A +K++ Sbjct: 241 ALVTANLQYTGIVFASIWGILIWNDVLGWLSWLGIVIILASGIVATFYNIR-STAASKSM 299 Query: 296 PKVDPIATEV 305 P +DPIA E+ Sbjct: 300 PPLDPIAAEL 309 >ref|YP_001352017.1| transporter of the DMT superfamily [Janthinobacterium sp. Marseille] gb|ABR89079.1| transporter of the DMT superfamily [Janthinobacterium sp. Marseille] Length = 304 Score = 298 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 182/305 (59%), Positives = 223/305 (73%), Gaps = 6/305 (1%) Query: 6 MLVASFLFSIMGVCVKLSSDYYSTAEVVLCRGIVGVAFIYGLVKIRGGTLRTPYPRDHLI 65 MLVA+ +FSIMGVCVKL+S+ YS AE+++ RG +GV FIY L+ +GG+LRT HL Sbjct: 1 MLVATLMFSIMGVCVKLASETYSVAEIIMYRGFIGVIFIYILILQQGGSLRTHLIWQHLW 60 Query: 66 RGGVGVISLWLWFYSFGLLPVATATTLNYMSSIWIAAMLFGVAWWQGHKKFEWGLAGTVA 125 R VGV +LWLWF + GLLP+ATA TLNYM+ IWI+ +LF AW G ++FEWGL + Sbjct: 61 RCVVGVTALWLWFCAIGLLPLATAMTLNYMAPIWISGILFVAAWRAGKRRFEWGLVLAIT 120 Query: 126 LSFLGVALLMRPSLNAEQLLGGAISLASGVLSALVYLQVRKLGLLGEPEYRVVFYFSATG 185 SF+GV LL+RPS++A+Q LGG + L SG LSAL YLQVR LG LGEPE RVVFYFSATG Sbjct: 121 ASFVGVTLLLRPSIHADQWLGGFLGLCSGALSALAYLQVRHLGQLGEPESRVVFYFSATG 180 Query: 186 VLAGLVGSVV-----TGRVPLWHSHSWIGALLVLMIGLTATTAQIAMTRAYRLGNTLVTA 240 +AGL G + + L SHS G L+L IG+ A AQ+AMTRAYRLGNTLVTA Sbjct: 181 FIAGLAGCLFGPGLHGESISLLRSHSTYGMFLLLSIGVFAAIAQMAMTRAYRLGNTLVTA 240 Query: 241 NLQYTGIVFSSLFGVLIWDDAPGWIGWLGMAIILASGMLATYRNQRKSQAVAKNVPKVDP 300 NLQYTGIVFSS++GVLIW D G+ WLG+AIIL SG++AT+ N R S A K V DP Sbjct: 241 NLQYTGIVFSSIWGVLIWSDILGFFSWLGIAIILVSGIVATFYNIRNS-ATVKAVTPADP 299 Query: 301 IATEV 305 I+TE+ Sbjct: 300 ISTEL 304 >ref|ZP_08274831.1| putative permease of the drug/metabolite transporter (DMT) superfamily [Oxalobacteraceae bacterium IMCC9480] gb|EGF31702.1| putative permease of the drug/metabolite transporter (DMT) superfamily [Oxalobacteraceae bacterium IMCC9480] Length = 309 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 179/309 (57%), Positives = 224/309 (72%), Gaps = 4/309 (1%) Query: 1 MQSLWMLVASFLFSIMGVCVKLSSDYYSTAEVVLCRGIVGVAFIYGLVKIRGGTLRTPYP 60 MQSLWML+A+FLF+IMGVCVKL+SDYYS AE+V+ RG +GV I LV +RG TLRT + Sbjct: 1 MQSLWMLLATFLFAIMGVCVKLASDYYSIAEIVMARGAIGVIVIGALVLLRGDTLRTRFA 60 Query: 61 RDHLIRGGVGVISLWLWFYSFGLLPVATATTLNYMSSIWIAAMLFGVAWWQGHKKFEWGL 120 R HL RG VGV + W+WFY+ LP++ A TLNYM+ IWIAA+LF WW+G + FE G+ Sbjct: 61 RHHLWRGTVGVTAFWMWFYAIATLPLSMAMTLNYMAPIWIAAILFTGGWWRGVRSFEPGM 120 Query: 121 AGTVALSFLGVALLMRPSLNAEQLLGGAISLASGVLSALVYLQVRKLGLLGEPEYRVVFY 180 + SF+GV LL++P+++A Q +G I+LASG+L+AL YLQVR+LG +GEPE RVVFY Sbjct: 121 ILAIMASFIGVTLLLQPAMHASQWMGALIALASGMLAALAYLQVRELGKMGEPESRVVFY 180 Query: 181 FSATGVLAGLVGSVVT----GRVPLWHSHSWIGALLVLMIGLTATTAQIAMTRAYRLGNT 236 FS T LAGL G ++ LWH S G LL+L IG AT AQ+AMTRAYRLG Sbjct: 181 FSLTSTLAGLGGVLLAPGPLADAALWHVPSTRGLLLLLAIGGCATVAQMAMTRAYRLGKI 240 Query: 237 LVTANLQYTGIVFSSLFGVLIWDDAPGWIGWLGMAIILASGMLATYRNQRKSQAVAKNVP 296 LVTANLQYTGIVFSS +GVL+W D GW GW G+A+IL+SG++ATY N R + +V Sbjct: 241 LVTANLQYTGIVFSSFWGVLLWQDVLGWKGWSGIAVILSSGLVATYYNTRSISSTDVSVT 300 Query: 297 KVDPIATEV 305 DPI EV Sbjct: 301 SSDPIVAEV 309