BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4978.p (380 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777220.1| dioxygenase subunit alpha oxidoreductase [He... 749 0.0 ref|YP_004751388.1| putative Choline monooxygenase with Rieske [... 670 0.0 ref|YP_001352018.1| dioxygenase (alpha subunit) oxidoreductase p... 654 0.0 ref|ZP_08274830.1| putative Choline monooxygenase with Rieske (2... 644 0.0 ref|YP_001098631.1| choline monooxygenase [Herminiimonas arsenic... 639 0.0 >ref|YP_003777220.1| dioxygenase subunit alpha oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ65312.1| dioxygenase (alpha subunit) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 374 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 350/360 (97%), Positives = 359/360 (99%) Query: 1 MSDLATFAKLARSNAQLPVHVYFDEPLHQRELKQLFQQGPRYVGHELMVPEAGDYSTLPW 60 MSDLATFAKLARSNAQLPVHVYFDEPL+QRELKQLFQQGPRYVGHELMVPEAGDYSTLPW Sbjct: 1 MSDLATFAKLARSNAQLPVHVYFDEPLYQRELKQLFQQGPRYVGHELMVPEAGDYSTLPW 60 Query: 61 ENEGRMLVRNAQGVELLSNVCRHRQAKMLDGRGHATNIVCPLHRWTYDLKGELIGAPHFG 120 ENEGRMLVRNAQG+EL+SNVCRHRQAKMLDGRGHA+NIVCPLHRWTYDLKGELIGAPHFG Sbjct: 61 ENEGRMLVRNAQGIELVSNVCRHRQAKMLDGRGHASNIVCPLHRWTYDLKGELIGAPHFG 120 Query: 121 ETPCMNLSKTPLQSWNGLLFENNGVNIADKLKHLGVTRDLDFSGYLYDHTEVHECDYNWK 180 +TPCMNLSKTPLQSWNGLLFE NGV+IADKLK+LGVTRDLDFSGYLYDHTEVHECDYNWK Sbjct: 121 QTPCMNLSKTPLQSWNGLLFEANGVDIADKLKNLGVTRDLDFSGYLYDHTEVHECDYNWK 180 Query: 181 TFIEVYLEDYHVEPFHPGLGNFVSCSDLKWEFGRDYSVQTVGVNHGLIKSGSPTYAKWQE 240 TFIEVYLEDYHVEPFHPGLGNFVSCSDLKWEFGRDYSVQTVGVNHGLIKSGSPTYAKWQE Sbjct: 181 TFIEVYLEDYHVEPFHPGLGNFVSCSDLKWEFGRDYSVQTVGVNHGLIKSGSPTYAKWQE 240 Query: 241 KLLQFSNGKPPKYGAIWLTLYPNIMVEWYPHVLVVSTLWPTGPQKTTNVVEFYYPEEIAL 300 KLLQFSNGKPPK+GAIWLTLYPNIMVEWYPHVLVVSTLWPTGPQKTTNVVEFYYPEEIAL Sbjct: 241 KLLQFSNGKPPKFGAIWLTLYPNIMVEWYPHVLVVSTLWPTGPQKTTNVVEFYYPEEIAL 300 Query: 301 FERELVEAERAAYMETCVEDDEIALRMDAGRRILMNRGTSEVGPYQSPMEDGMQHFHEWY 360 FERELVEAERAAYMETCVEDDEIALRMDAGRRILM+RGTSEVGPYQSPMEDGMQHFHEWY Sbjct: 301 FERELVEAERAAYMETCVEDDEIALRMDAGRRILMDRGTSEVGPYQSPMEDGMQHFHEWY 360 >ref|YP_004751388.1| putative Choline monooxygenase with Rieske [2Fe-2S] domain [Collimonas fungivorans Ter331] gb|AEK60565.1| putative Choline monooxygenase with Rieske [2Fe-2S] domain [Collimonas fungivorans Ter331] Length = 367 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 306/364 (84%), Positives = 334/364 (91%) Query: 1 MSDLATFAKLARSNAQLPVHVYFDEPLHQRELKQLFQQGPRYVGHELMVPEAGDYSTLPW 60 MSDLA+ KLARS+AQLPV+VYFDE L +RE++QLFQ GPRYVGHELMVP GDY+TL Sbjct: 1 MSDLASITKLARSDAQLPVNVYFDEALLKREIQQLFQNGPRYVGHELMVPNVGDYATLAS 60 Query: 61 ENEGRMLVRNAQGVELLSNVCRHRQAKMLDGRGHATNIVCPLHRWTYDLKGELIGAPHFG 120 ENEGRMLVRN QG+EL+SNVCRHRQAKM DGRG+A NIVCPLHRWTYDLKGELIGAPHFG Sbjct: 61 ENEGRMLVRNPQGIELVSNVCRHRQAKMFDGRGNARNIVCPLHRWTYDLKGELIGAPHFG 120 Query: 121 ETPCMNLSKTPLQSWNGLLFENNGVNIADKLKHLGVTRDLDFSGYLYDHTEVHECDYNWK 180 ETPCMNLS+TPLQ+WNGLLFE N ++ +KL LGV +DLDFSGYL+DH EVHECDYNWK Sbjct: 121 ETPCMNLSRTPLQNWNGLLFEQNAFHVGEKLAQLGVAKDLDFSGYLFDHVEVHECDYNWK 180 Query: 181 TFIEVYLEDYHVEPFHPGLGNFVSCSDLKWEFGRDYSVQTVGVNHGLIKSGSPTYAKWQE 240 TFIEVYLEDYHVEPFHPGLG+FVSC DL+W+FG+DYSVQTVGVNHGL KSGSP Y KWQE Sbjct: 181 TFIEVYLEDYHVEPFHPGLGSFVSCDDLEWQFGKDYSVQTVGVNHGLAKSGSPAYKKWQE 240 Query: 241 KLLQFSNGKPPKYGAIWLTLYPNIMVEWYPHVLVVSTLWPTGPQKTTNVVEFYYPEEIAL 300 ++L+FSNG+PPK+GAIWLTLYPNIMVEWYPHVLVVSTLWP GPQKTTNVVEFYYPEEIAL Sbjct: 241 QVLKFSNGEPPKFGAIWLTLYPNIMVEWYPHVLVVSTLWPRGPQKTTNVVEFYYPEEIAL 300 Query: 301 FERELVEAERAAYMETCVEDDEIALRMDAGRRILMNRGTSEVGPYQSPMEDGMQHFHEWY 360 FERE+VEAERAAYMETCVEDDEIALRMDAGRRILM RG +EVGPYQSPMEDGMQHFHEWY Sbjct: 301 FEREMVEAERAAYMETCVEDDEIALRMDAGRRILMERGVNEVGPYQSPMEDGMQHFHEWY 360 Query: 361 PVAD 364 D Sbjct: 361 RSQD 364 >ref|YP_001352018.1| dioxygenase (alpha subunit) oxidoreductase protein [Janthinobacterium sp. Marseille] gb|ABR88661.1| dioxygenase (alpha subunit) oxidoreductase protein [Janthinobacterium sp. Marseille] Length = 417 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 296/360 (82%), Positives = 323/360 (89%) Query: 1 MSDLATFAKLARSNAQLPVHVYFDEPLHQRELKQLFQQGPRYVGHELMVPEAGDYSTLPW 60 MSDLA AKLARSNAQLPV+VYFDE L ++E++QLF+ GPRY GHELMVP GD++TL W Sbjct: 52 MSDLANLAKLARSNAQLPVNVYFDEALLKQEIQQLFRAGPRYAGHELMVPNVGDFATLAW 111 Query: 61 ENEGRMLVRNAQGVELLSNVCRHRQAKMLDGRGHATNIVCPLHRWTYDLKGELIGAPHFG 120 ENEGRMLVR+ QG+ELLSNVCRHRQAKM +GRGHA NIVCPLHRWTYDLKGELIGAPHFG Sbjct: 112 ENEGRMLVRSQQGIELLSNVCRHRQAKMFNGRGHAKNIVCPLHRWTYDLKGELIGAPHFG 171 Query: 121 ETPCMNLSKTPLQSWNGLLFENNGVNIADKLKHLGVTRDLDFSGYLYDHTEVHECDYNWK 180 ETPC+NLS TPLQSWNGLLFE NGVN+A L LGVT+DLDFSGY+ DH EVHECDYNWK Sbjct: 172 ETPCLNLSNTPLQSWNGLLFEQNGVNVAKILGKLGVTKDLDFSGYMLDHVEVHECDYNWK 231 Query: 181 TFIEVYLEDYHVEPFHPGLGNFVSCSDLKWEFGRDYSVQTVGVNHGLIKSGSPTYAKWQE 240 TFIEVYLEDYHVEPFHPGLG+FVSC DLKWEFG +YSVQTVGV+H L KSGS Y KWQE Sbjct: 232 TFIEVYLEDYHVEPFHPGLGSFVSCDDLKWEFGDEYSVQTVGVHHALAKSGSEKYQKWQE 291 Query: 241 KLLQFSNGKPPKYGAIWLTLYPNIMVEWYPHVLVVSTLWPTGPQKTTNVVEFYYPEEIAL 300 ++LQF NG+ P YGAIWLTLYPNIMVEWYPHVLVVST+WP GPQKT NVVEFYYPEEI L Sbjct: 292 QILQFRNGETPPYGAIWLTLYPNIMVEWYPHVLVVSTVWPNGPQKTRNVVEFYYPEEIVL 351 Query: 301 FERELVEAERAAYMETCVEDDEIALRMDAGRRILMNRGTSEVGPYQSPMEDGMQHFHEWY 360 FER+ V AERAAYMETC EDDEIALRMDAGR+IL++RG +EVGPYQSPMEDGMQHFHEWY Sbjct: 352 FERDFVAAERAAYMETCEEDDEIALRMDAGRKILLDRGENEVGPYQSPMEDGMQHFHEWY 411 >ref|ZP_08274830.1| putative Choline monooxygenase with Rieske (2Fe-2S) domain [Oxalobacteraceae bacterium IMCC9480] gb|EGF31701.1| putative Choline monooxygenase with Rieske (2Fe-2S) domain [Oxalobacteraceae bacterium IMCC9480] Length = 368 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 293/360 (81%), Positives = 327/360 (90%) Query: 1 MSDLATFAKLARSNAQLPVHVYFDEPLHQRELKQLFQQGPRYVGHELMVPEAGDYSTLPW 60 MSDLAT AKLARS+AQLPV+VYFD L+Q+E++QLF+QGPRYVGH+LMVPEAGD+STLPW Sbjct: 3 MSDLATNAKLARSSAQLPVNVYFDAKLYQQEIQQLFRQGPRYVGHQLMVPEAGDFSTLPW 62 Query: 61 ENEGRMLVRNAQGVELLSNVCRHRQAKMLDGRGHATNIVCPLHRWTYDLKGELIGAPHFG 120 ENEGRMLVRNA G+ELLSNVCRHRQAKML+GRG+ATNIVCPLHRWTYDLKGEL+GAPHF Sbjct: 63 ENEGRMLVRNAHGIELLSNVCRHRQAKMLNGRGNATNIVCPLHRWTYDLKGELLGAPHFA 122 Query: 121 ETPCMNLSKTPLQSWNGLLFENNGVNIADKLKHLGVTRDLDFSGYLYDHTEVHECDYNWK 180 ETPC+NLSKT LQ+WNGLLFE NG ++A L L V LDF+GYL DH EVHEC+YNWK Sbjct: 123 ETPCLNLSKTALQNWNGLLFEQNGFDVAATLGQLDVMPALDFAGYLLDHVEVHECNYNWK 182 Query: 181 TFIEVYLEDYHVEPFHPGLGNFVSCSDLKWEFGRDYSVQTVGVNHGLIKSGSPTYAKWQE 240 TFIEVYLEDYHVEPFHPGLG+FVSC DLKW+FG +SVQTVGVN GL K+GSP Y KWQ+ Sbjct: 183 TFIEVYLEDYHVEPFHPGLGSFVSCDDLKWQFGEHFSVQTVGVNQGLAKAGSPKYRKWQD 242 Query: 241 KLLQFSNGKPPKYGAIWLTLYPNIMVEWYPHVLVVSTLWPTGPQKTTNVVEFYYPEEIAL 300 ++L+F NG P YGAIWLTLYPN+MVEWYPHVLVVSTLWPTGPQ TTNVVEFYYPEEI L Sbjct: 243 QVLKFRNGTVPDYGAIWLTLYPNVMVEWYPHVLVVSTLWPTGPQTTTNVVEFYYPEEIVL 302 Query: 301 FERELVEAERAAYMETCVEDDEIALRMDAGRRILMNRGTSEVGPYQSPMEDGMQHFHEWY 360 FERE +EAERAAYMETC+EDDEIALRMDAGR+IL++RG +EVGPYQSPMEDGMQHFHEWY Sbjct: 303 FEREFIEAERAAYMETCIEDDEIALRMDAGRKILLDRGVNEVGPYQSPMEDGMQHFHEWY 362 >ref|YP_001098631.1| choline monooxygenase [Herminiimonas arsenicoxydans] emb|CAL60502.1| putative Choline monooxygenase with Rieske [2Fe-2S] domain [Herminiimonas arsenicoxydans] Length = 366 Score = 639 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 291/360 (80%), Positives = 323/360 (89%) Query: 1 MSDLATFAKLARSNAQLPVHVYFDEPLHQRELKQLFQQGPRYVGHELMVPEAGDYSTLPW 60 MSDLA AKLARSNAQLPV+VYFDE L ++E++QLF+ GPRY GHELMVP GD++TL W Sbjct: 1 MSDLANLAKLARSNAQLPVNVYFDEALLKQEIQQLFRDGPRYAGHELMVPNVGDFATLAW 60 Query: 61 ENEGRMLVRNAQGVELLSNVCRHRQAKMLDGRGHATNIVCPLHRWTYDLKGELIGAPHFG 120 ENEGRMLVRN QG+ELLSNVCRHRQAKM +GRGHA+NIVCPLHRWTYDLKGELIGAPHFG Sbjct: 61 ENEGRMLVRNPQGIELLSNVCRHRQAKMFNGRGHASNIVCPLHRWTYDLKGELIGAPHFG 120 Query: 121 ETPCMNLSKTPLQSWNGLLFENNGVNIADKLKHLGVTRDLDFSGYLYDHTEVHECDYNWK 180 ETPC+NLS TPLQ+WNGLLFE NGV++A L +LGVT+DLDFSGY+ DH EVH+C+YNWK Sbjct: 121 ETPCLNLSNTPLQNWNGLLFERNGVDVAKILGNLGVTKDLDFSGYMLDHIEVHDCNYNWK 180 Query: 181 TFIEVYLEDYHVEPFHPGLGNFVSCSDLKWEFGRDYSVQTVGVNHGLIKSGSPTYAKWQE 240 TFIEVYLEDYHVEPFHPGLG+FVSC DLKWEFG YSVQTVGV++ L K GSP Y KWQE Sbjct: 181 TFIEVYLEDYHVEPFHPGLGSFVSCDDLKWEFGDQYSVQTVGVHNALAKHGSPVYQKWQE 240 Query: 241 KLLQFSNGKPPKYGAIWLTLYPNIMVEWYPHVLVVSTLWPTGPQKTTNVVEFYYPEEIAL 300 ++LQF G+ P YGAIWLTLYPNIMVEWYPHVLVVST+WP GPQKT NVVEFYYPEEI L Sbjct: 241 QILQFRKGEAPPYGAIWLTLYPNIMVEWYPHVLVVSTVWPDGPQKTRNVVEFYYPEEIVL 300 Query: 301 FERELVEAERAAYMETCVEDDEIALRMDAGRRILMNRGTSEVGPYQSPMEDGMQHFHEWY 360 FERE + AERAAYMETC EDDEIALRMDAGR+IL++RG +EVGPYQSPMEDGMQHFHEWY Sbjct: 301 FEREFIAAERAAYMETCEEDDEIALRMDAGRKILLDRGENEVGPYQSPMEDGMQHFHEWY 360