BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4976.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum sero... 441 e-122 ref|YP_004751390.1| geranyltranstransferase [Collimonas fungivor... 385 e-105 ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsen... 372 e-101 ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium s... 358 7e-97 ref|ZP_08274828.1| Octaprenyl-diphosphate synthase [Oxalobactera... 332 5e-89 >ref|YP_003777218.1| geranyltranstransferase [Herbaspirillum seropedicae SmR1] gb|ADJ65310.1| geranyltranstransferase (farnesyl-diphosphate synthase) protein [Herbaspirillum seropedicae SmR1] Length = 311 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 268/300 (89%), Positives = 286/300 (95%) Query: 16 FADWMRQVQGGMEDVLDRFLPATSVVPARLHEAMRYTAMDGGKRVRPLLVYAAGDIFDTP 75 FA WM QVQ GME+VL+RFLP+ SVVPARLHEAMRYTAMDGGKRVRPLLVYAAG++FDTP Sbjct: 12 FAQWMGQVQSGMEEVLNRFLPSASVVPARLHEAMRYTAMDGGKRVRPLLVYAAGELFDTP 71 Query: 76 RALLDRAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQAQAF 135 RALL+RAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVH++YDEATALLVGDALQAQAF Sbjct: 72 RALLERAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHIRYDEATALLVGDALQAQAF 131 Query: 136 DTLSAPLEAELVKSDAGVTARQLRMVNLLAQAAGSVGMCGGQAIDLASVGMTLSLAELEQ 195 DTL+APLE+E +DAG+ ARQLRMV LLA+AAGSVGMCGGQAIDLASVGMTLSLAELEQ Sbjct: 132 DTLAAPLESEAGSADAGLPARQLRMVKLLAEAAGSVGMCGGQAIDLASVGMTLSLAELEQ 191 Query: 196 MHRLKTGALLRAAVLLGALGGKALSADESAALDEYARAIGLAFQVVDDILDATADSATLG 255 MHRLKTGALLRAAVLLGALGGKAL+A ESAALD+YARAIGLAFQVVDDILDATADSATLG Sbjct: 192 MHRLKTGALLRAAVLLGALGGKALTAAESAALDDYARAIGLAFQVVDDILDATADSATLG 251 Query: 256 KTAGKDAADNKPTYVSILGLAESQALAEKLRGNAHAALAPFGEKARRLRELADLIVQRKT 315 KTAGKDAADNKPTYVSILGLAESQALA +L+ +AH ALAPFG KARRLRELADLIVQRKT Sbjct: 252 KTAGKDAADNKPTYVSILGLAESQALAGRLQADAHEALAPFGGKARRLRELADLIVQRKT 311 >ref|YP_004751390.1| geranyltranstransferase [Collimonas fungivorans Ter331] gb|AEK60567.1| Geranyltranstransferase [Collimonas fungivorans Ter331] Length = 299 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 233/304 (76%), Positives = 257/304 (84%), Gaps = 9/304 (2%) Query: 14 LTFADWMRQVQGGMEDVLDRFLPATSVVPARLHEAMRYTAMDGGKRVRPLLVYAAGDIFD 73 + F WMRQ Q GME LDRFLPA + +PARLH+AMRY +DGGKRVRPLLV+AAG++F Sbjct: 1 MAFDAWMRQTQTGMEAALDRFLPAATSIPARLHQAMRYAVLDGGKRVRPLLVFAAGELFA 60 Query: 74 TPRALLDRAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQAQ 133 TP + RAAAAVEMIH YSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQ+Q Sbjct: 61 TPLTVAQRAAAAVEMIHAYSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQSQ 120 Query: 134 AFDTLS---APLEAELVKSDAGVTARQLRMVNLLAQAAGSVGMCGGQAIDLASVGMTLSL 190 AF L+ A + AE+ +ARQ+ M+ LLAQA+GS+GMCGGQAIDLASVG+ LSL Sbjct: 121 AFVVLAEAGAEIGAEID------SARQIVMLRLLAQASGSLGMCGGQAIDLASVGLNLSL 174 Query: 191 AELEQMHRLKTGALLRAAVLLGALGGKALSADESAALDEYARAIGLAFQVVDDILDATAD 250 AELEQMH+LKTGALLRA+VLLGA GGKAL+ E AL+ Y AIGLAFQVVDDILDATAD Sbjct: 175 AELEQMHKLKTGALLRASVLLGAWGGKALAPAEIEALEAYGTAIGLAFQVVDDILDATAD 234 Query: 251 SATLGKTAGKDAADNKPTYVSILGLAESQALAEKLRGNAHAALAPFGEKARRLRELADLI 310 SATLGKTAGKDAADNKPTYVSILGL ESQALAEKLR +AH ALA FG KARRLRELADLI Sbjct: 235 SATLGKTAGKDAADNKPTYVSILGLPESQALAEKLRNDAHQALAIFGNKARRLRELADLI 294 Query: 311 VQRK 314 VQRK Sbjct: 295 VQRK 298 >ref|YP_001098634.1| geranyltranstransferase [Herminiimonas arsenicoxydans] emb|CAL60505.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP synthase) [Herminiimonas arsenicoxydans] Length = 294 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 225/301 (74%), Positives = 248/301 (82%), Gaps = 11/301 (3%) Query: 15 TFADWMRQVQGGMEDVLDRFLPATSVVPARLHEAMRYTAMDGGKRVRPLLVYAAGDIFDT 74 +F WM+ QG ME L + LP ++ PARLHEAM Y +DGGKRVRPLLVYAAG +FD Sbjct: 3 SFDGWMKATQGEMELALVQHLPPVALTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDA 62 Query: 75 PRALLDRAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQAQA 134 A L RAAAAVEMIH YSLVHDDMPCMDDDALRRGKPTVHV+YDEA ALLVGDALQ+QA Sbjct: 63 DAAELARAAAAVEMIHAYSLVHDDMPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQA 122 Query: 135 FDTLSAPLEAELVKSDAGVT-ARQLRMVNLLAQAAGSVGMCGGQAIDLASVGMTLSLAEL 193 FD L+ D G+ RQL MV LLA+A+GS+GMCGGQAIDLASVG+ LSL EL Sbjct: 123 FDVLA----------DGGIDPVRQLAMVRLLAKASGSLGMCGGQAIDLASVGLNLSLEEL 172 Query: 194 EQMHRLKTGALLRAAVLLGALGGKALSADESAALDEYARAIGLAFQVVDDILDATADSAT 253 EQMHRLKTGALLR +VLLGAL GK+LSA+E+ ALD YA AIGLAFQVVDD+LDATADSAT Sbjct: 173 EQMHRLKTGALLRVSVLLGALAGKSLSAEETQALDSYAAAIGLAFQVVDDVLDATADSAT 232 Query: 254 LGKTAGKDAADNKPTYVSILGLAESQALAEKLRGNAHAALAPFGEKARRLRELADLIVQR 313 LGKTAGKDAADNKPTYVSILGL +S+ LAEKLR +AH AL FGEKARRLRELADLIVQR Sbjct: 233 LGKTAGKDAADNKPTYVSILGLEQSRTLAEKLRNDAHRALEQFGEKARRLRELADLIVQR 292 Query: 314 K 314 K Sbjct: 293 K 293 >ref|YP_001352020.1| geranyltranstransferase [Janthinobacterium sp. Marseille] gb|ABR88405.1| geranyltranstransferase [Janthinobacterium sp. Marseille] Length = 280 Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats. Identities = 223/289 (77%), Positives = 242/289 (83%), Gaps = 11/289 (3%) Query: 27 MEDVLDRFLPATSVVPARLHEAMRYTAMDGGKRVRPLLVYAAGDIFDTPRALLDRAAAAV 86 ME L + LP + PARLHEAM Y +DGGKRVRPLLVYAAG +FD A L RAAAAV Sbjct: 1 MELALVQHLPPVAQTPARLHEAMHYAVLDGGKRVRPLLVYAAGALFDADAAELARAAAAV 60 Query: 87 EMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQAQAFDTLSAPLEAEL 146 EMIH YSLVHDDMPCMDDDALRRGKPTVHV+YDEA ALLVGDALQ+QAFD L+ Sbjct: 61 EMIHAYSLVHDDMPCMDDDALRRGKPTVHVKYDEACALLVGDALQSQAFDVLA------- 113 Query: 147 VKSDAGVT-ARQLRMVNLLAQAAGSVGMCGGQAIDLASVGMTLSLAELEQMHRLKTGALL 205 D G+ RQL MV LLA+A+GS+GMCGGQAIDLASVG++LSL ELEQMHRLKTGALL Sbjct: 114 ---DGGLDPVRQLAMVRLLAKASGSLGMCGGQAIDLASVGLSLSLEELEQMHRLKTGALL 170 Query: 206 RAAVLLGALGGKALSADESAALDEYARAIGLAFQVVDDILDATADSATLGKTAGKDAADN 265 R +VLLGAL GKALSA+E+ ALD YA AIGLAFQVVDD+LDATADSATLGKTAGKDAADN Sbjct: 171 RVSVLLGALAGKALSAEETQALDSYAAAIGLAFQVVDDVLDATADSATLGKTAGKDAADN 230 Query: 266 KPTYVSILGLAESQALAEKLRGNAHAALAPFGEKARRLRELADLIVQRK 314 KPTYVSILGL +SQALAEKLR +AH AL FGEKARRLRELADLIVQRK Sbjct: 231 KPTYVSILGLEQSQALAEKLRNDAHRALEQFGEKARRLRELADLIVQRK 279 >ref|ZP_08274828.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31699.1| Octaprenyl-diphosphate synthase [Oxalobacteraceae bacterium IMCC9480] Length = 294 Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats. Identities = 214/299 (71%), Positives = 239/299 (79%), Gaps = 9/299 (3%) Query: 16 FADWMRQVQGGMEDVLDRFLPATSVVPARLHEAMRYTAMDGGKRVRPLLVYAAGDIFDTP 75 F WMR Q E L ++LPA + +P RLH AMRY +DGGKRVRPLLV AA ++FD Sbjct: 4 FDGWMRSTQADAERALVQYLPAATALPLRLHAAMRYAVLDGGKRVRPLLVQAAAELFDAA 63 Query: 76 RALLDRAAAAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQAQAF 135 A + RAA+AVEMIH YSLVHDDMPCMDDDALRRGKPTVHV YDEATALLVGDALQAQAF Sbjct: 64 PANVARAASAVEMIHAYSLVHDDMPCMDDDALRRGKPTVHVAYDEATALLVGDALQAQAF 123 Query: 136 DTLSAPLEAELVKSDAGVTARQLRMVNLLAQAAGSVGMCGGQAIDLASVGMTLSLAELEQ 195 L A ++ E AR + M+ LLA AAGS+GMCGGQAIDLASVGM LSLAELEQ Sbjct: 124 FVL-AGMDIE--------PARAVAMLRLLADAAGSIGMCGGQAIDLASVGMDLSLAELEQ 174 Query: 196 MHRLKTGALLRAAVLLGALGGKALSADESAALDEYARAIGLAFQVVDDILDATADSATLG 255 MHRLKTGALLRA+VLLGA G A +AAL+ YA AIGLAFQV+DD+LDATADSATLG Sbjct: 175 MHRLKTGALLRASVLLGAWCGTTPDAAATAALEAYAAAIGLAFQVIDDVLDATADSATLG 234 Query: 256 KTAGKDAADNKPTYVSILGLAESQALAEKLRGNAHAALAPFGEKARRLRELADLIVQRK 314 KTAGKDAAD+KPTYVSILGL S+ALAEKLR +AH A+ PFG+KAR LR+LADLIVQRK Sbjct: 235 KTAGKDAADHKPTYVSILGLEPSRALAEKLRSDAHRAVLPFGDKARHLRDLADLIVQRK 293