BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.4972.p         (247 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777216.1| hypothetical protein Hsero_3830 [Herbaspiril...   352   3e-95
ref|YP_001352023.1| hypothetical protein mma_0333 [Janthinobacte...   283   1e-74
ref|YP_004751393.1| cob(I)alamin adenosyltransferase PduO [Colli...   277   1e-72
ref|ZP_08276172.1| Cob(I)alamin adenosyltransferase PduO [Oxalob...   276   2e-72
ref|YP_368067.1| ATP:cob(I)alamin adenosyltransferase [Burkholde...   273   1e-71

>ref|YP_003777216.1| hypothetical protein Hsero_3830 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65308.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 185

 Score =  352 bits (903), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 181/185 (97%), Positives = 185/185 (100%)

Query: 63  MMGNRLSKIATRTGDDGSTGLGDGSRVGKDNLRIQALGDVDELNSQLGLLLCETLPAALR 122
           MMGNRLSKIATRTGDDGSTGLGDGSRVGKDNLRIQALGDVDELNSQLGLLLCE+LPAALR
Sbjct: 1   MMGNRLSKIATRTGDDGSTGLGDGSRVGKDNLRIQALGDVDELNSQLGLLLCESLPAALR 60

Query: 123 EELVSIQHDLFDLGGELCIPGYTVLADAHLARLDALLEKYNATLPPLKEFILPGGSRTAA 182
           EELVSIQHDLFDLGGELCIPGYTVLADAHLARLDALLEKYNATLPPLKEFILPGGSRTAA
Sbjct: 61  EELVSIQHDLFDLGGELCIPGYTVLADAHLARLDALLEKYNATLPPLKEFILPGGSRTAA 120

Query: 183 LAHVCRTVCRRAERSVVMLEKSEAGVNAPARQYLNRLSDLCFVLARVLNREAGGKDVLWE 242
           LAHVCRTVCRRAERSVVMLEK+EAGVNAPARQYLNRLSDLCFVLARVLNREAGG+DVLW+
Sbjct: 121 LAHVCRTVCRRAERSVVMLEKAEAGVNAPARQYLNRLSDLCFVLARVLNREAGGQDVLWQ 180

Query: 243 KGRER 247
           KGRER
Sbjct: 181 KGRER 185


>ref|YP_001352023.1| hypothetical protein mma_0333 [Janthinobacterium sp. Marseille]
 gb|ABR88460.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 187

 Score =  283 bits (724), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 142/184 (77%), Positives = 158/184 (85%), Gaps = 1/184 (0%)

Query: 64  MGNRLSKIATRTGDDGSTGLGDGSRVGKDNLRIQALGDVDELNSQLGLLLCETLPAALRE 123
           MGNRLSKIATRTGD G+TGLGDGSRV KD LRI A+GDVDELNS LGLLLCE LPAALRE
Sbjct: 1   MGNRLSKIATRTGDKGTTGLGDGSRVDKDALRIHAMGDVDELNSHLGLLLCEDLPAALRE 60

Query: 124 ELVSIQHDLFDLGGELCIPGYTVLADAHLARLDALLEKYNATLPPLKEFILPGGSRTAAL 183
           EL+SIQHDLFDLGGE+CIPGYT++ D  +ARLD LL KYN+TLPPLKEFILP GSR A+ 
Sbjct: 61  ELISIQHDLFDLGGEICIPGYTLIHDEQVARLDGLLAKYNSTLPPLKEFILPAGSRAASQ 120

Query: 184 AHVCRTVCRRAERSVVMLEKSEAGVNAPARQYLNRLSDLCFVLARVLNREAGGKDVLWEK 243
           AH+CRTVCRRAER++V L K+E  +N   RQY+NRLSDL FVL+RVLNR AGG DVLWEK
Sbjct: 121 AHICRTVCRRAERTIVSLGKAEK-INDNPRQYMNRLSDLMFVLSRVLNRYAGGGDVLWEK 179

Query: 244 GRER 247
            R R
Sbjct: 180 DRVR 183


>ref|YP_004751393.1| cob(I)alamin adenosyltransferase PduO [Collimonas fungivorans
           Ter331]
 gb|AEK60570.1| Cob(I)alamin adenosyltransferase PduO [Collimonas fungivorans
           Ter331]
          Length = 185

 Score =  277 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 145/184 (78%), Positives = 159/184 (86%), Gaps = 1/184 (0%)

Query: 64  MGNRLSKIATRTGDDGSTGLGDGSRVGKDNLRIQALGDVDELNSQLGLLLCETLPAALRE 123
           MGNRLSKIATRTGD G+TGLGDGSR GKD+LRIQA+GDVDELNSQLGLLLCE L A LRE
Sbjct: 1   MGNRLSKIATRTGDKGTTGLGDGSRTGKDSLRIQAIGDVDELNSQLGLLLCEQLAAELRE 60

Query: 124 ELVSIQHDLFDLGGELCIPGYTVLADAHLARLDALLEKYNATLPPLKEFILPGGSRTAAL 183
            L+SIQHDLFDLGGELCIPGY +++ A +ARLD LLEKYNA LPPLK+FILPGG+R AAL
Sbjct: 61  ALLSIQHDLFDLGGELCIPGYALVSAAQVARLDDLLEKYNADLPPLKDFILPGGNRPAAL 120

Query: 184 AHVCRTVCRRAERSVVMLEKSEAGVNAPARQYLNRLSDLCFVLARVLNREAGGKDVLWEK 243
           AHVCRTVCRRAERS+V L KSE  VN   RQY+NRLSDL FVL+RVLNR  GG DVLW+K
Sbjct: 121 AHVCRTVCRRAERSIVSLGKSET-VNEEVRQYVNRLSDLLFVLSRVLNRADGGSDVLWQK 179

Query: 244 GRER 247
            R R
Sbjct: 180 DRLR 183


>ref|ZP_08276172.1| Cob(I)alamin adenosyltransferase PduO [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF30355.1| Cob(I)alamin adenosyltransferase PduO [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 186

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 138/184 (75%), Positives = 156/184 (84%), Gaps = 1/184 (0%)

Query: 64  MGNRLSKIATRTGDDGSTGLGDGSRVGKDNLRIQALGDVDELNSQLGLLLCETLPAALRE 123
           MGNRLSKIATRTGD G+TGLGDGSR+ KD LR+ A+GDVDELNS +G+LLCE LP ALRE
Sbjct: 1   MGNRLSKIATRTGDKGTTGLGDGSRIDKDALRVHAMGDVDELNSHIGMLLCEELPPALRE 60

Query: 124 ELVSIQHDLFDLGGELCIPGYTVLADAHLARLDALLEKYNATLPPLKEFILPGGSRTAAL 183
           ELVSIQHDLFD+GGELCIPGYT++ DA + RLD LLEKYNA LP LK+FILP GSR AA+
Sbjct: 61  ELVSIQHDLFDMGGELCIPGYTMITDAQVLRLDTLLEKYNADLPALKDFILPAGSRGAAI 120

Query: 184 AHVCRTVCRRAERSVVMLEKSEAGVNAPARQYLNRLSDLCFVLARVLNREAGGKDVLWEK 243
           AHVCRTVCRRAER +V L K E   +AP RQY+NRLSDL FVL+RVLNR  GG DVLW+K
Sbjct: 121 AHVCRTVCRRAERHIVSLGKVETLNDAP-RQYMNRLSDLLFVLSRVLNRFGGGSDVLWQK 179

Query: 244 GRER 247
            R+R
Sbjct: 180 ERQR 183


>ref|YP_368067.1| ATP:cob(I)alamin adenosyltransferase [Burkholderia sp. 383]
 gb|ABB07423.1| ATP:cob(I)alamin adenosyltransferase [Burkholderia sp. 383]
          Length = 183

 Score =  273 bits (699), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 140/184 (76%), Positives = 156/184 (84%), Gaps = 1/184 (0%)

Query: 64  MGNRLSKIATRTGDDGSTGLGDGSRVGKDNLRIQALGDVDELNSQLGLLLCETLPAALRE 123
           MGNRLSKIATRTGDDG+TGLGDG R+GKD+ RI A+GDVDELNS LG+LL ETLP  +R 
Sbjct: 1   MGNRLSKIATRTGDDGTTGLGDGRRIGKDDTRIAAIGDVDELNSNLGVLLAETLPDEIRS 60

Query: 124 ELVSIQHDLFDLGGELCIPGYTVLADAHLARLDALLEKYNATLPPLKEFILPGGSRTAAL 183
            LV+IQHDLFDLGGELCIPG+TVL D HLARLD  L  YNATLPPLKEFILP GSR A+L
Sbjct: 61  ALVTIQHDLFDLGGELCIPGHTVLDDTHLARLDRWLADYNATLPPLKEFILPAGSRAASL 120

Query: 184 AHVCRTVCRRAERSVVMLEKSEAGVNAPARQYLNRLSDLCFVLARVLNREAGGKDVLWEK 243
           AHVCRTVCRRAERS+V L ++E   +AP R+Y+NRLSDL FVLARVLNR  GG DVLWE+
Sbjct: 121 AHVCRTVCRRAERSIVALGRTETLNDAP-RRYVNRLSDLLFVLARVLNRTDGGSDVLWER 179

Query: 244 GRER 247
           GR R
Sbjct: 180 GRVR 183