BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4971.p (471 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777215.1| D-lactate dehydrogenase [Herbaspirillum sero... 941 0.0 ref|YP_004751394.1| putative oxidoreductase in glycolate utiliza... 796 0.0 ref|ZP_08276173.1| Fe-S protein, lactate dehydrogenase-like prot... 740 0.0 ref|YP_004226956.1| FAD linked oxidase domain-containing protein... 682 0.0 ref|ZP_02882532.1| FAD linked oxidase domain protein [Burkholder... 678 0.0 >ref|YP_003777215.1| D-lactate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65307.1| D-lactate dehydrogenase (cytochrome) protein [Herbaspirillum seropedicae SmR1] Length = 471 Score = 941 bits (2432), Expect = 0.0, Method: Composition-based stats. Identities = 464/471 (98%), Positives = 469/471 (99%) Query: 1 MNHLVDARKLKRPVPQALLDELKALFGERCSTTLAMREHHGRDESSYDPMLPDAVVFAHS 60 MNHLVDARKLKRPVPQALLDELKALFG+RCSTTLAMREHHGRDESSYDPMLPDAVVFAHS Sbjct: 1 MNHLVDARKLKRPVPQALLDELKALFGDRCSTTLAMREHHGRDESSYDPMLPDAVVFAHS 60 Query: 61 TEEVAAFVKLCSQYDTPIIPYGAGTSLEGHVLALQGGVTVDLSQMNQVLAVNAEDLTATV 120 TEEVAAFVKLCSQYDTPIIPYGAGTSLEGHVLALQGGVTVDLSQMNQVLAV+AEDLTATV Sbjct: 61 TEEVAAFVKLCSQYDTPIIPYGAGTSLEGHVLALQGGVTVDLSQMNQVLAVHAEDLTATV 120 Query: 121 QAGVTRKQLNQEIKDTGLFFPIDPGADASLGGMASTRASGTNAVRYGTMKENTLTLTVVT 180 QAGVTRKQLNQEIKDTGLFFPIDPGADASLGGMASTRASGTNAVRYGTMKENTLTLTVVT Sbjct: 121 QAGVTRKQLNQEIKDTGLFFPIDPGADASLGGMASTRASGTNAVRYGTMKENTLTLTVVT 180 Query: 181 AQGEIIKTGTRAKKSSAGYDLTRVYVGSEGTLGIITEVTVRLYPQPEAISAAICSFPSVA 240 AQGEIIKTGTRAKKSSAGYDLTRVYVGSEGTLGIITEVTVRLYPQPEAISAAICSFP+VA Sbjct: 181 AQGEIIKTGTRAKKSSAGYDLTRVYVGSEGTLGIITEVTVRLYPQPEAISAAICSFPTVA 240 Query: 241 DAVNTVIQTIQMGVPLARVELLDENGVRAINAHDRLSLPVNPLLLFEFHGSENGVKEQAE 300 DAVNTVIQTIQMGVPLARVELLDENGVRAINAHD+LSLPVNPLLLFEFHGSENGVKEQAE Sbjct: 241 DAVNTVIQTIQMGVPLARVELLDENGVRAINAHDKLSLPVNPLLLFEFHGSENGVKEQAE 300 Query: 301 LVQDIAKEFHALGFEWATRPEDRTRLWTARHNAYFALLQLRPGARAISTDCCVPISRLAE 360 LVQDIAKEFHALGFEWATRPEDRTRLWTARHNAYFALLQLRPGARAISTDCCVPISRLAE Sbjct: 301 LVQDIAKEFHALGFEWATRPEDRTRLWTARHNAYFALLQLRPGARAISTDCCVPISRLAE 360 Query: 361 CVLATKADCEEQGLIHAIIGHVGDGNFHVQMMVDPNDPADIARAEGVNARMVARALGMDG 420 CVLATKADCEEQGL HAIIGHVGDGNFHVQMMVDPNDPADIARAEGVN RMVARA+GMDG Sbjct: 361 CVLATKADCEEQGLTHAIIGHVGDGNFHVQMMVDPNDPADIARAEGVNQRMVARAIGMDG 420 Query: 421 TCTGEHGVGLHKMDFLIQEHGEGAIAVMRAIKHALDPKNIMNPGKILRWEQ 471 TCTGEHGVGLHKMDFLIQEHGEGAIAVMRAIKHALDPKNIMNPGKILRWEQ Sbjct: 421 TCTGEHGVGLHKMDFLIQEHGEGAIAVMRAIKHALDPKNIMNPGKILRWEQ 471 >ref|YP_004751394.1| putative oxidoreductase in glycolate utilization operon [Collimonas fungivorans Ter331] gb|AEK60571.1| Putative oxidoreductase in glycolate utilization operon [Collimonas fungivorans Ter331] Length = 500 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 383/469 (81%), Positives = 432/469 (92%) Query: 1 MNHLVDARKLKRPVPQALLDELKALFGERCSTTLAMREHHGRDESSYDPMLPDAVVFAHS 60 MNH+ D LK+P+P ALL L ALFGER STT+AMREHHGRD SSYDPMLPDAVVF S Sbjct: 32 MNHIADLAALKKPLPDALLAALGALFGERFSTTVAMREHHGRDASSYDPMLPDAVVFVES 91 Query: 61 TEEVAAFVKLCSQYDTPIIPYGAGTSLEGHVLALQGGVTVDLSQMNQVLAVNAEDLTATV 120 TEEVAA VKLCS+Y P+IP+G+GTSLEGHVLALQGG++VDLS+MN++LA++AEDLTATV Sbjct: 92 TEEVAALVKLCSEYLVPVIPFGSGTSLEGHVLALQGGISVDLSRMNRLLAIHAEDLTATV 151 Query: 121 QAGVTRKQLNQEIKDTGLFFPIDPGADASLGGMASTRASGTNAVRYGTMKENTLTLTVVT 180 Q GVTRKQLN EIKD+GLFFPIDPGADAS+GGMA+TRASGTNAVRYG+M+ENTL LTVVT Sbjct: 152 QTGVTRKQLNHEIKDSGLFFPIDPGADASIGGMAATRASGTNAVRYGSMRENTLALTVVT 211 Query: 181 AQGEIIKTGTRAKKSSAGYDLTRVYVGSEGTLGIITEVTVRLYPQPEAISAAICSFPSVA 240 A G IIKTGTRAKKS+AGYDLTR++VGSEGTLG+ITEVTV+LYPQPEAISAA+CSF ++A Sbjct: 212 ADGRIIKTGTRAKKSAAGYDLTRIFVGSEGTLGVITEVTVKLYPQPEAISAAVCSFQNIA 271 Query: 241 DAVNTVIQTIQMGVPLARVELLDENGVRAINAHDRLSLPVNPLLLFEFHGSENGVKEQAE 300 DAVN VIQTIQ+GVP+ARVELLDENGVRAINAH +L+LP PLLLFEFHGSENGVKEQAE Sbjct: 272 DAVNAVIQTIQLGVPVARVELLDENGVRAINAHSKLALPEQPLLLFEFHGSENGVKEQAE 331 Query: 301 LVQDIAKEFHALGFEWATRPEDRTRLWTARHNAYFALLQLRPGARAISTDCCVPISRLAE 360 LVQ + E HA+GFEWATRPEDR+RLWTARHNAYFALLQLRPG+RAISTDCCVPISRLAE Sbjct: 332 LVQAVVAEHHAVGFEWATRPEDRSRLWTARHNAYFALLQLRPGSRAISTDCCVPISRLAE 391 Query: 361 CVLATKADCEEQGLIHAIIGHVGDGNFHVQMMVDPNDPADIARAEGVNARMVARALGMDG 420 C+L TKADCE G++++IIGHVGDGNFHVQM+VDP+D ADIARAEGVNARMV+RA+GMDG Sbjct: 392 CILETKADCEANGMVYSIIGHVGDGNFHVQMLVDPDDAADIARAEGVNARMVSRAIGMDG 451 Query: 421 TCTGEHGVGLHKMDFLIQEHGEGAIAVMRAIKHALDPKNIMNPGKILRW 469 TCTGEHGVGLHK+DFLI+EHG AIA MRA+KHA DPKNIMNPGKI+RW Sbjct: 452 TCTGEHGVGLHKIDFLIEEHGVEAIATMRALKHAFDPKNIMNPGKIIRW 500 >ref|ZP_08276173.1| Fe-S protein, lactate dehydrogenase-like protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30356.1| Fe-S protein, lactate dehydrogenase-like protein [Oxalobacteraceae bacterium IMCC9480] Length = 469 Score = 740 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 367/469 (78%), Positives = 410/469 (87%) Query: 1 MNHLVDARKLKRPVPQALLDELKALFGERCSTTLAMREHHGRDESSYDPMLPDAVVFAHS 60 MNH+V+ L++P+P ALL +L+AL GER STT AMREHHGRDESSY PMLPDAV FAHS Sbjct: 1 MNHIVNLAALRKPLPAALLAQLRALLGERLSTTQAMREHHGRDESSYAPMLPDAVAFAHS 60 Query: 61 TEEVAAFVKLCSQYDTPIIPYGAGTSLEGHVLALQGGVTVDLSQMNQVLAVNAEDLTATV 120 T+EVAA V C+ + P+IP+G+GTSLEGH+LALQGG+++DLSQ N+V+A +AEDLTATV Sbjct: 61 TDEVAAIVSACNTHGVPVIPFGSGTSLEGHILALQGGISIDLSQFNRVIATHAEDLTATV 120 Query: 121 QAGVTRKQLNQEIKDTGLFFPIDPGADASLGGMASTRASGTNAVRYGTMKENTLTLTVVT 180 QAGVTRKQLN E+KDTGLFFPIDPGADASLGGMA+TRASGTNAVRYGTM+ENTL LTVVT Sbjct: 121 QAGVTRKQLNVELKDTGLFFPIDPGADASLGGMAATRASGTNAVRYGTMRENTLALTVVT 180 Query: 181 AQGEIIKTGTRAKKSSAGYDLTRVYVGSEGTLGIITEVTVRLYPQPEAISAAICSFPSVA 240 A G +IKTGTRA+KSSAGYDLTR+YVGSEGTLGIITEVTVRLYPQPEAISAA+CSF S Sbjct: 181 ADGRVIKTGTRARKSSAGYDLTRLYVGSEGTLGIITEVTVRLYPQPEAISAAVCSFASAG 240 Query: 241 DAVNTVIQTIQMGVPLARVELLDENGVRAINAHDRLSLPVNPLLLFEFHGSENGVKEQAE 300 DAVN VI+ IQ+GVP+ARVE LDENGVRAINAHD L LP PLLLFEFHGS V EQA Sbjct: 241 DAVNAVIELIQLGVPVARVEFLDENGVRAINAHDHLGLPEQPLLLFEFHGSTASVAEQAA 300 Query: 301 LVQDIAKEFHALGFEWATRPEDRTRLWTARHNAYFALLQLRPGARAISTDCCVPISRLAE 360 V+DI A GF+WATRPEDR+RLW ARHNAYFALLQLRPG AISTDCCVPISRLAE Sbjct: 301 QVRDIVAGHQATGFDWATRPEDRSRLWAARHNAYFALLQLRPGCTAISTDCCVPISRLAE 360 Query: 361 CVLATKADCEEQGLIHAIIGHVGDGNFHVQMMVDPNDPADIARAEGVNARMVARALGMDG 420 C+L TKADCE+ ++++IIGHVGDGNFHV MMVDPND ADIA+AE +NARMV RAL MDG Sbjct: 361 CILDTKADCEQHQMVYSIIGHVGDGNFHVLMMVDPNDAADIAQAEAINARMVTRALAMDG 420 Query: 421 TCTGEHGVGLHKMDFLIQEHGEGAIAVMRAIKHALDPKNIMNPGKILRW 469 TCTGEHGVGLHKMDFLI+EHG AI MRAIKHALDPKNIMNPGKI+RW Sbjct: 421 TCTGEHGVGLHKMDFLIEEHGVNAIDTMRAIKHALDPKNIMNPGKIIRW 469 >ref|YP_004226956.1| FAD linked oxidase domain-containing protein [Burkholderia sp. CCGE1001] gb|ADX53896.1| FAD linked oxidase domain protein [Burkholderia sp. CCGE1001] Length = 471 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 320/469 (68%), Positives = 389/469 (82%) Query: 1 MNHLVDARKLKRPVPQALLDELKALFGERCSTTLAMREHHGRDESSYDPMLPDAVVFAHS 60 MN LV L+RP P ALL+ L FGER S A+REHHGRDES +DP LPDAVVFA S Sbjct: 1 MNQLVPPAPLRRPFPPALLNALTDAFGERASVAQAVREHHGRDESPFDPQLPDAVVFARS 60 Query: 61 TEEVAAFVKLCSQYDTPIIPYGAGTSLEGHVLALQGGVTVDLSQMNQVLAVNAEDLTATV 120 TE+V V+LCSQY+ PIIPYG G+SLEGH+LA+QGGV++DLS+MN+VL++NAEDLT TV Sbjct: 61 TEDVQTIVRLCSQYNVPIIPYGNGSSLEGHLLAVQGGVSIDLSEMNRVLSINAEDLTVTV 120 Query: 121 QAGVTRKQLNQEIKDTGLFFPIDPGADASLGGMASTRASGTNAVRYGTMKENTLTLTVVT 180 + G++RKQLN+ ++DTGLFFPIDPGADAS+GGM++TRASGTNAVRYGTM+EN L LTVV Sbjct: 121 EPGISRKQLNEALRDTGLFFPIDPGADASIGGMSATRASGTNAVRYGTMRENVLGLTVVL 180 Query: 181 AQGEIIKTGTRAKKSSAGYDLTRVYVGSEGTLGIITEVTVRLYPQPEAISAAICSFPSVA 240 A G +IKTGTRA+KSSAGYDLTR++VGSEGTLG+ITE+TVRLYPQPEA+SAA+C+FPS+ Sbjct: 181 ADGRVIKTGTRARKSSAGYDLTRLFVGSEGTLGVITEITVRLYPQPEAVSAAVCAFPSMG 240 Query: 241 DAVNTVIQTIQMGVPLARVELLDENGVRAINAHDRLSLPVNPLLLFEFHGSENGVKEQAE 300 DAV VI+TIQ+GVP+ARVE +D +R+IN H L+L P L FEFHG+E GVKEQAE Sbjct: 241 DAVRAVIETIQIGVPIARVEFVDALAIRSINRHSNLTLREAPTLFFEFHGTEAGVKEQAE 300 Query: 301 LVQDIAKEFHALGFEWATRPEDRTRLWTARHNAYFALLQLRPGARAISTDCCVPISRLAE 360 LVQ++A + GFEWATRPEDR+RLW ARHNAYFA+LQL+PG RA++TD CVPISRLAE Sbjct: 301 LVQELAAQNGGEGFEWATRPEDRSRLWNARHNAYFAMLQLKPGCRAVTTDVCVPISRLAE 360 Query: 361 CVLATKADCEEQGLIHAIIGHVGDGNFHVQMMVDPNDPADIARAEGVNARMVARALGMDG 420 CV+ T+ D + L I+GHVGDGNFHV +++DPN P ++ AE +N R+V RAL MDG Sbjct: 361 CVVETEQDLKTSPLPCPIVGHVGDGNFHVAILIDPNKPEELVEAERLNHRIVQRALRMDG 420 Query: 421 TCTGEHGVGLHKMDFLIQEHGEGAIAVMRAIKHALDPKNIMNPGKILRW 469 TCTGEHGVGLHKM FL++EHG+ A+ MR+IKHALDP N+MNPGKI W Sbjct: 421 TCTGEHGVGLHKMAFLLEEHGDVAVDTMRSIKHALDPHNLMNPGKIFSW 469 >ref|ZP_02882532.1| FAD linked oxidase domain protein [Burkholderia graminis C4D1M] gb|EDT11735.1| FAD linked oxidase domain protein [Burkholderia graminis C4D1M] Length = 471 Score = 678 bits (1749), Expect = 0.0, Method: Composition-based stats. Identities = 319/469 (68%), Positives = 386/469 (82%) Query: 1 MNHLVDARKLKRPVPQALLDELKALFGERCSTTLAMREHHGRDESSYDPMLPDAVVFAHS 60 MN+ V L+RP LL L FGER S A+REHHGRDES +DP LPDAVVFA + Sbjct: 1 MNYGVPPAALRRPFSPELLSALTDAFGERVSVAQAVREHHGRDESPFDPQLPDAVVFARN 60 Query: 61 TEEVAAFVKLCSQYDTPIIPYGAGTSLEGHVLALQGGVTVDLSQMNQVLAVNAEDLTATV 120 TE+V VKLC QYD PIIPYG G+SLEGH+LA+QGGV++DLS+MN+VL++NAEDLT TV Sbjct: 61 TEDVQTIVKLCGQYDVPIIPYGNGSSLEGHLLAVQGGVSIDLSEMNRVLSINAEDLTVTV 120 Query: 121 QAGVTRKQLNQEIKDTGLFFPIDPGADASLGGMASTRASGTNAVRYGTMKENTLTLTVVT 180 + G++RKQLN+ ++DTGLFFPIDPGADAS+GGM++TRASGTNAVRYGTM+EN L LTVV Sbjct: 121 EPGISRKQLNEALRDTGLFFPIDPGADASIGGMSATRASGTNAVRYGTMRENVLGLTVVL 180 Query: 181 AQGEIIKTGTRAKKSSAGYDLTRVYVGSEGTLGIITEVTVRLYPQPEAISAAICSFPSVA 240 A G +IKTGTRA+KSSAGYDLTR++VGSEGTLG+ITE+TVRLYPQPEA+SAA+C+FPS+ Sbjct: 181 ADGRVIKTGTRARKSSAGYDLTRLFVGSEGTLGVITEITVRLYPQPEAVSAAVCAFPSMG 240 Query: 241 DAVNTVIQTIQMGVPLARVELLDENGVRAINAHDRLSLPVNPLLLFEFHGSENGVKEQAE 300 DAV VI+TIQMGVP+ARVE +D +R+IN H L+L P L FEFHG+E GVKEQAE Sbjct: 241 DAVRAVIETIQMGVPIARVEFVDALAIRSINRHSNLTLREAPTLFFEFHGTEAGVKEQAE 300 Query: 301 LVQDIAKEFHALGFEWATRPEDRTRLWTARHNAYFALLQLRPGARAISTDCCVPISRLAE 360 LVQ++A + GFEWATRPEDR+RLW ARHNAYFA+LQL+PG RA++TD CVPISRLAE Sbjct: 301 LVQELAAQNGGEGFEWATRPEDRSRLWNARHNAYFAMLQLKPGCRAVTTDVCVPISRLAE 360 Query: 361 CVLATKADCEEQGLIHAIIGHVGDGNFHVQMMVDPNDPADIARAEGVNARMVARALGMDG 420 CV+ T+ D + L I+GHVGDGNFHV +++DPN P ++ AE +N R+V RAL MDG Sbjct: 361 CVVETEQDLKTSPLPCPIVGHVGDGNFHVAILIDPNKPEELVEAERLNHRIVQRALRMDG 420 Query: 421 TCTGEHGVGLHKMDFLIQEHGEGAIAVMRAIKHALDPKNIMNPGKILRW 469 TCTGEHGVGLHKM+FL++EHG+ AI MR+IKHALDP N+MNPGKI W Sbjct: 421 TCTGEHGVGLHKMNFLLEEHGDVAIDTMRSIKHALDPHNLMNPGKIFSW 469