BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4967.p (413 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777211.1| glycolate oxidase iron-sulfur subunit oxidor... 820 0.0 ref|YP_001352027.1| glycolate oxidase iron-sulfur subunit [Janth... 668 0.0 ref|YP_001098642.1| glycolate oxidase iron-sulfur subunit [Hermi... 664 0.0 ref|YP_004751398.1| glycolate dehydrogenase, iron-sulfur subunit... 650 0.0 ref|ZP_08273208.1| Glycolate dehydrogenase [Oxalobacteraceae bac... 637 e-180 >ref|YP_003777211.1| glycolate oxidase iron-sulfur subunit oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ65303.1| glycolate oxidase, iron-sulfur subunit oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 414 Score = 820 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 389/411 (94%), Positives = 404/411 (98%) Query: 1 MQTNLADFIRNTQAGEEADSILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 MQTNLADFIRNTQAG+EADSILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE Sbjct: 1 MQTNLADFIRNTQAGQEADSILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 Query: 61 GKPATAATQSHLDRCLTCRNCESTCPSGVQYGRLVDIGRKVVEEQVQRPFGERVLRTALK 120 GKPATAATQSHLDRCLTCRNCESTCPSGVQYGRLVDIGRKVVEEQV RP +RV+RTALK Sbjct: 61 GKPATAATQSHLDRCLTCRNCESTCPSGVQYGRLVDIGRKVVEEQVPRPLSQRVMRTALK 120 Query: 121 ELVPRKWIFRPAMKAGQMVRPLLPKLLQNKVPLPQDAGSWPTRTHARQMLLLEGCVQPSM 180 ELVPRKWIFRPAMKAGQM+RPLLPKLLQNKVPLPQ+AG+WPTRTHARQML LEGCVQPSM Sbjct: 121 ELVPRKWIFRPAMKAGQMLRPLLPKLLQNKVPLPQEAGAWPTRTHARQMLYLEGCVQPSM 180 Query: 181 APNINSATARVLDALGVQLFAPPKAGCCGAIRYHLNDQDGGLDDMRRNIDAWWPYIEGRD 240 +PNINSATARVLDALGVQLFAPPKAGCCGAIRYH+NDQ+GGL+DMRRNIDAWWPYIEGRD Sbjct: 181 SPNINSATARVLDALGVQLFAPPKAGCCGAIRYHMNDQEGGLEDMRRNIDAWWPYIEGRD 240 Query: 241 GVRADTIVMNASGCGATVKEYGHLLQHDPDYAEKARRISRMTRDISEILPEFEEQLQHKL 300 G+RADTIVMNASGCG+TVKEYGHLLQHDP YAEKARRIS MTRDISEILPEFEE L+HKL Sbjct: 241 GIRADTIVMNASGCGSTVKEYGHLLQHDPVYAEKARRISHMTRDISEILPEFEEALKHKL 300 Query: 301 KDFNGKRVAYHPPCTLQHGQKIRGKVEGILRAAGVDVQLCADSHLCCGSAGTYSVLQPEL 360 KDFNGKRVAYHPPCTLQHGQKIRGKVEGILRAAGVDVQLCADSHLCCGSAGTYS+LQPEL Sbjct: 301 KDFNGKRVAYHPPCTLQHGQKIRGKVEGILRAAGVDVQLCADSHLCCGSAGTYSILQPEL 360 Query: 361 SYRLRDNKISKLQATDPDMIVTGNIGCVTHLQSGTDTPVRHWIELLDSALQ 411 SYRLRDNKISKLQATDPDMIVTGNIGCVTHLQSGTDTPVRHWIELLD+ALQ Sbjct: 361 SYRLRDNKISKLQATDPDMIVTGNIGCVTHLQSGTDTPVRHWIELLDAALQ 411 >ref|YP_001352027.1| glycolate oxidase iron-sulfur subunit [Janthinobacterium sp. Marseille] gb|ABR88649.1| glycolate oxidase (iron-sulfur subunit) [Janthinobacterium sp. Marseille] Length = 410 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 313/410 (76%), Positives = 358/410 (87%), Gaps = 4/410 (0%) Query: 1 MQTNLADFIRNTQAGEEADSILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 MQTNLADFI++T+ G EAD+ILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE Sbjct: 1 MQTNLADFIKDTREGHEADAILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 Query: 61 GKPATAATQSHLDRCLTCRNCESTCPSGVQYGRLVDIGRKVVEEQVQRPFGERVLRTALK 120 GK TA TQ HLDRCLTCRNCE+TCPSGV+YGRL+DIGRKVVE+QV F +++ RTALK Sbjct: 61 GKKPTAKTQLHLDRCLTCRNCETTCPSGVKYGRLIDIGRKVVEDQVPYSFSQKLKRTALK 120 Query: 121 ELVPRKWIFRPAMKAGQMVRPLLPKLLQNKVPLPQDAGSWPTRTHARQMLLLEGCVQPSM 180 EL+PRKW+F PAMK GQ+ RPLLP+ LQNKVP ++AGSWPTR HAR+MLLL+GCVQP+M Sbjct: 121 ELLPRKWLFTPAMKTGQLFRPLLPQALQNKVPHRENAGSWPTRDHARKMLLLDGCVQPAM 180 Query: 181 APNINSATARVLDALGVQLFAPPKAGCCGAIRYHLNDQDGGLDDMRRNIDAWWPYIEGRD 240 +PNIN+ATARVLDALGVQL PKAGCCGAIR+HLND DG LDDMRRNIDAWWP ++ Sbjct: 181 SPNINAATARVLDALGVQLVVAPKAGCCGAIRHHLNDHDGALDDMRRNIDAWWPLVQA-- 238 Query: 241 GVRADTIVMNASGCGATVKEYGHLLQHDPDYAEKARRISRMTRDISEILPEFEEQLQHKL 300 A+ IVM ASGCGATVK+YGHLL+ DP YAEKA IS +T+D+SEI+P FE +L+ KL Sbjct: 239 --GAEAIVMTASGCGATVKDYGHLLEADPAYAEKAAVISSLTKDLSEIMPAFEAELEGKL 296 Query: 301 KDFNGKRVAYHPPCTLQHGQKIRGKVEGILRAAGVDVQLCADSHLCCGSAGTYSVLQPEL 360 KRVAYHPPCTLQHGQ+IRGKVEG+LRA GVDVQLC DSHLCCGSAGTYSV+QPEL Sbjct: 297 NGKISKRVAYHPPCTLQHGQQIRGKVEGVLRAVGVDVQLCGDSHLCCGSAGTYSVMQPEL 356 Query: 361 SYRLRDNKISKLQATDPDMIVTGNIGCVTHLQSGTDTPVRHWIELLDSAL 410 SY+LRDNK++KL T +MIV+ NIGC+THLQSGTDTPV+HWIEL+DSAL Sbjct: 357 SYQLRDNKLAKLAETKAEMIVSANIGCLTHLQSGTDTPVKHWIELIDSAL 406 >ref|YP_001098642.1| glycolate oxidase iron-sulfur subunit [Herminiimonas arsenicoxydans] emb|CAL60513.1| Glycolate oxidase iron-sulfur subunit [Herminiimonas arsenicoxydans] Length = 410 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 311/413 (75%), Positives = 354/413 (85%), Gaps = 4/413 (0%) Query: 1 MQTNLADFIRNTQAGEEADSILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 MQTNLADFI++T+ G EAD+ILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE Sbjct: 1 MQTNLADFIKDTREGREADAILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 Query: 61 GKPATAATQSHLDRCLTCRNCESTCPSGVQYGRLVDIGRKVVEEQVQRPFGERVLRTALK 120 GK TA TQ HLDRCLTCRNCE+TCPSGVQYGRL+DIGRKVVEE+V F + RTAL+ Sbjct: 61 GKTPTAKTQLHLDRCLTCRNCETTCPSGVQYGRLIDIGRKVVEERVPYSFATNLKRTALR 120 Query: 121 ELVPRKWIFRPAMKAGQMVRPLLPKLLQNKVPLPQDAGSWPTRTHARQMLLLEGCVQPSM 180 EL+PRKW+F PAMK GQ+ RPLLPK LQNKVP ++AG+WPTR HAR+MLLL+GC QP+M Sbjct: 121 ELLPRKWLFTPAMKTGQLFRPLLPKSLQNKVPRKENAGAWPTRAHARKMLLLDGCAQPAM 180 Query: 181 APNINSATARVLDALGVQLFAPPKAGCCGAIRYHLNDQDGGLDDMRRNIDAWWPYIEGRD 240 +PNIN+ATARV DALGVQL PKAGCCGAIR+HLND DG LDDMRRNIDAWWP +E Sbjct: 181 SPNINAATARVFDALGVQLVVAPKAGCCGAIRHHLNDHDGALDDMRRNIDAWWPLVEA-- 238 Query: 241 GVRADTIVMNASGCGATVKEYGHLLQHDPDYAEKARRISRMTRDISEILPEFEEQLQHKL 300 A+ IVM ASGCG VK+YGHLL HD YA+KA+RIS +T+D+SEILP FE +LQ +L Sbjct: 239 --GAEAIVMTASGCGVMVKDYGHLLAHDAKYADKAQRISDLTKDLSEILPAFELELQIRL 296 Query: 301 KDFNGKRVAYHPPCTLQHGQKIRGKVEGILRAAGVDVQLCADSHLCCGSAGTYSVLQPEL 360 GKRV YHPPCTLQHGQ+IRGKVEG+LRA GVDVQLC DSHLCCGSAGTYSVLQPEL Sbjct: 297 NGKIGKRVVYHPPCTLQHGQQIRGKVEGVLRAVGVDVQLCKDSHLCCGSAGTYSVLQPEL 356 Query: 361 SYRLRDNKISKLQATDPDMIVTGNIGCVTHLQSGTDTPVRHWIELLDSALQQA 413 SY+LRD K++ L+A+ P+MIV+ NIGC+THLQSGTDTPV+HWIEL+D AL A Sbjct: 357 SYQLRDQKLANLEASQPEMIVSANIGCLTHLQSGTDTPVKHWIELIDKALSAA 409 >ref|YP_004751398.1| glycolate dehydrogenase, iron-sulfur subunit [Collimonas fungivorans Ter331] gb|AEK60575.1| Glycolate dehydrogenase, iron-sulfur subunit [Collimonas fungivorans Ter331] Length = 411 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 316/410 (77%), Positives = 356/410 (86%) Query: 1 MQTNLADFIRNTQAGEEADSILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 MQTNLADFI+NT+AG+EAD+ILR+CVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE Sbjct: 1 MQTNLADFIKNTRAGKEADAILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 Query: 61 GKPATAATQSHLDRCLTCRNCESTCPSGVQYGRLVDIGRKVVEEQVQRPFGERVLRTALK 120 G AT TQSHLDRCLTCRNCESTCPSGV+YGRL+DIGRKVVE+QV RP +++ R LK Sbjct: 61 GTKATVKTQSHLDRCLTCRNCESTCPSGVEYGRLLDIGRKVVEDQVPRPVAQQLTRQLLK 120 Query: 121 ELVPRKWIFRPAMKAGQMVRPLLPKLLQNKVPLPQDAGSWPTRTHARQMLLLEGCVQPSM 180 EL+PR W+F+PAM AGQ++RPLLP+ L+NKVP Q AG +P R HAR+MLLL+GCVQP+M Sbjct: 121 ELLPRPWLFKPAMAAGQLLRPLLPRKLKNKVPEKQQAGIFPRREHARKMLLLDGCVQPAM 180 Query: 181 APNINSATARVLDALGVQLFAPPKAGCCGAIRYHLNDQDGGLDDMRRNIDAWWPYIEGRD 240 +PNIN A ARV DAL VQL PKAGCCGAIRYHLNDQ GGLDDMRRNIDAWWPY+ G + Sbjct: 181 SPNINRAAARVFDALEVQLLVAPKAGCCGAIRYHLNDQAGGLDDMRRNIDAWWPYVIGSN 240 Query: 241 GVRADTIVMNASGCGATVKEYGHLLQHDPDYAEKARRISRMTRDISEILPEFEEQLQHKL 300 G + IVM ASGCG TVKEYGHLL DP YA KA+ IS +T+D+SEILP FE +LQ KL Sbjct: 241 GQGVEAIVMTASGCGVTVKEYGHLLAADPLYAVKAKAISALTKDLSEILPAFEAELQEKL 300 Query: 301 KDFNGKRVAYHPPCTLQHGQKIRGKVEGILRAAGVDVQLCADSHLCCGSAGTYSVLQPEL 360 + +RVAYHPPCTLQHGQ+IRGKVEG+LR+ GVDVQLCADSHLCCGSAGTYSVLQPEL Sbjct: 301 QGKIPQRVAYHPPCTLQHGQQIRGKVEGLLRSVGVDVQLCADSHLCCGSAGTYSVLQPEL 360 Query: 361 SYRLRDNKISKLQATDPDMIVTGNIGCVTHLQSGTDTPVRHWIELLDSAL 410 SYRLRDNK++ LQAT PDMIV+ NIGC+THLQSGT TPVRHWIELLD AL Sbjct: 361 SYRLRDNKLNSLQATQPDMIVSANIGCLTHLQSGTQTPVRHWIELLDQAL 410 >ref|ZP_08273208.1| Glycolate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33327.1| Glycolate dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 410 Score = 637 bits (1642), Expect = e-180, Method: Composition-based stats. Identities = 304/413 (73%), Positives = 346/413 (83%), Gaps = 4/413 (0%) Query: 1 MQTNLADFIRNTQAGEEADSILRSCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 MQTNLADFI+NT G EAD+ILR+CVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE Sbjct: 1 MQTNLADFIKNTPDGIEADAILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLE 60 Query: 61 GKPATAATQSHLDRCLTCRNCESTCPSGVQYGRLVDIGRKVVEEQVQRPFGERVLRTALK 120 G T TQ HLDRCL+CR+CE+TCPSGVQYGRL++IGRK V+ QV RP + ++RTALK Sbjct: 61 GVTPTTKTQLHLDRCLSCRSCETTCPSGVQYGRLLEIGRKAVDAQVPRPLAQLLVRTALK 120 Query: 121 ELVPRKWIFRPAMKAGQMVRPLLPKLLQNKVPLPQDAGSWPTRTHARQMLLLEGCVQPSM 180 E +PRKW+F PAMK GQ++RP LPK L+NKVP + G P R HAR+MLLL+GCVQPSM Sbjct: 121 EALPRKWLFTPAMKTGQLLRPFLPKSLRNKVPAARPRGLMPMREHARKMLLLDGCVQPSM 180 Query: 181 APNINSATARVLDALGVQLFAPPKAGCCGAIRYHLNDQDGGLDDMRRNIDAWWPYIEGRD 240 APNIN+ATARVLDALGVQL PKAGCCGAIR+HLNDQDGGL+DMR NIDAWWP +E Sbjct: 181 APNINAATARVLDALGVQLVVAPKAGCCGAIRFHLNDQDGGLNDMRANIDAWWPLVEA-- 238 Query: 241 GVRADTIVMNASGCGATVKEYGHLLQHDPDYAEKARRISRMTRDISEILPEFEEQLQHKL 300 A+ IVM ASGCG+ VK+YGHLL+HD YAEKA RIS +TRD+SEI+P FE QLQ KL Sbjct: 239 --GAEAIVMTASGCGSMVKDYGHLLRHDMMYAEKAARISALTRDLSEIMPAFEAQLQEKL 296 Query: 301 KDFNGKRVAYHPPCTLQHGQKIRGKVEGILRAAGVDVQLCADSHLCCGSAGTYSVLQPEL 360 + RVAYHPPCTLQHGQ+IRGKVE +LRA GVDVQLC DSH+CCGSAGTYSV QPEL Sbjct: 297 RGKITHRVAYHPPCTLQHGQQIRGKVESVLRAIGVDVQLCGDSHICCGSAGTYSVTQPEL 356 Query: 361 SYRLRDNKISKLQATDPDMIVTGNIGCVTHLQSGTDTPVRHWIELLDSALQQA 413 SY+LRDNK+ KL AT P IV+ NIGC+THLQSGT+TPV+HWIEL+D AL A Sbjct: 357 SYQLRDNKLEKLHATKPQTIVSANIGCLTHLQSGTETPVQHWIELIDGALTAA 409