BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4954.p (256 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777202.1| 3-oxoacyl-(acyl-carrier-protein) reductase [... 442 e-122 ref|YP_001566660.1| short-chain dehydrogenase/reductase SDR [Del... 295 3e-78 ref|YP_001811916.1| short-chain dehydrogenase/reductase SDR [Bur... 286 3e-75 ref|YP_003911142.1| short-chain dehydrogenase/reductase SDR [Bur... 283 1e-74 ref|ZP_03500877.1| short-chain dehydrogenase/reductase SDR [Rhiz... 270 2e-70 >ref|YP_003777202.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Herbaspirillum seropedicae SmR1] gb|ADJ65294.1| 3-oxoacyl-(acyl-carrier-protein) reductase protein [Herbaspirillum seropedicae SmR1] Length = 256 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 246/256 (96%), Positives = 250/256 (97%) Query: 1 MNRNDSGARVALVTGGAMGIGASISAQLAAKGHTVLVADINLEAASKTAHALVAAGHRAA 60 MNRNDSGARVALVTGGAMGIGASIS QLAAKGHTVLVADINL+AASKTA ALVAAGHRAA Sbjct: 1 MNRNDSGARVALVTGGAMGIGASISQQLAAKGHTVLVADINLDAASKTADALVAAGHRAA 60 Query: 61 ALQMDLGSPEAIAQAFAHIEKDYGRCDVLVNNAGVARTYSFLDYPLDNWLQTMNVNVTGV 120 LQMDLGSPE+IA AFAHIEKDYGRCDVLVNNAGVARTYSFLDYPL+NWLQTMNVNVTGV Sbjct: 61 PLQMDLGSPESIAAAFAHIEKDYGRCDVLVNNAGVARTYSFLDYPLENWLQTMNVNVTGV 120 Query: 121 LLAGQHAARLMVSKGWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGI 180 LLAGQHAARLMV + WGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGI Sbjct: 121 LLAGQHAARLMVKQQWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGI 180 Query: 181 TVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGH 240 TVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGH Sbjct: 181 TVNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGH 240 Query: 241 VIPVDGGFVAGGVLEI 256 VIPVDGGFVAGGVLEI Sbjct: 241 VIPVDGGFVAGGVLEI 256 >ref|YP_001566660.1| short-chain dehydrogenase/reductase SDR [Delftia acidovorans SPH-1] ref|XP_002536339.1| 3-oxoacyl-[acyl-carrier-protein] reductase, putative [Ricinus communis] gb|ABX38275.1| short-chain dehydrogenase/reductase SDR [Delftia acidovorans SPH-1] gb|EEF26043.1| 3-oxoacyl-[acyl-carrier-protein] reductase, putative [Ricinus communis] Length = 256 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 160/248 (64%), Positives = 204/248 (82%), Gaps = 1/248 (0%) Query: 6 SGARVALVTGGAMGIGASISAQLAAKGHTVLVADINLEAASKTAHALVAAGHRAAALQMD 65 S +RVALVTGGA GIGA + A+LA GH VLVAD++++AA+ TA L AAG RA AL++D Sbjct: 5 SESRVALVTGGAKGIGAEVCARLAVLGHHVLVADLDVDAATATALELSAAGGRATALRLD 64 Query: 66 LGSPEAIAQAFAHIEKDYGRCDVLVNNAGVARTYSFLDYPLDNWLQTMNVNVTGVLLAGQ 125 +G PEAIA AF +E+++GRCD+LVN+AG+A+ + F+D+PLDN++ TMNVNVTG LL Q Sbjct: 65 VGKPEAIATAFEQVEREHGRCDILVNSAGIAKVFPFIDFPLDNFVATMNVNVTGTLLCAQ 124 Query: 126 HAARLMVSKGWGRIVNISSISGIRA-GAGRTAYGTSKAAVIGLTRQMAIELAQYGITVNS 184 AARLMV +GWGRIVNI+S++G+RA G+GRTAYGTSK AVI LTRQMA+ELA++GIT N+ Sbjct: 125 AAARLMVKQGWGRIVNIASVAGMRAVGSGRTAYGTSKGAVIALTRQMAVELAEHGITANA 184 Query: 185 VAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGHVIPV 244 VAPGPVDTPMTQA+H+ Q R Y + +PM RYGT EIASAV YL +E++ Y+TG +PV Sbjct: 185 VAPGPVDTPMTQALHTAQFRAEYSKAIPMNRYGTCGEIASAVTYLVSEDARYVTGIAMPV 244 Query: 245 DGGFVAGG 252 DGGF+A G Sbjct: 245 DGGFLASG 252 >ref|YP_001811916.1| short-chain dehydrogenase/reductase SDR [Burkholderia ambifaria MC40-6] gb|ACB67700.1| short-chain dehydrogenase/reductase SDR [Burkholderia ambifaria MC40-6] Length = 259 Score = 286 bits (731), Expect = 3e-75, Method: Composition-based stats. Identities = 151/251 (60%), Positives = 192/251 (76%), Gaps = 1/251 (0%) Query: 3 RNDSGARVALVTGGAMGIGASISAQLAAKGHTVLVADINLEAASKTAHALVAAGHRAAAL 62 + +RVA+VTGGAMGIGA + QLA +G+ V++ADIN AA + A AG +A+ Sbjct: 5 KQSDASRVAVVTGGAMGIGADSAEQLAKRGYHVVLADINKSAAEEAASRFQRAGLSVSAI 64 Query: 63 QMDLGSPEAIAQAFAHIEKDYGRCDVLVNNAGVARTYSFLDYPLDNWLQTMNVNVTGVLL 122 +MD+ + E+IA AF ++K +GRCDVLVN AG+A+ F+DYPLD +L+TM VNVTG L Sbjct: 65 EMDVSNSESIAAAFGELDKRHGRCDVLVNGAGIAKLVPFIDYPLDTFLKTMQVNVTGAFL 124 Query: 123 AGQHAARLMVSKGWGRIVNISSISGIRA-GAGRTAYGTSKAAVIGLTRQMAIELAQYGIT 181 QHAARLMV WGRI+NI+S++G+RA G GRTAYGTSK AVI LTRQMA+EL YGIT Sbjct: 125 CSQHAARLMVKNRWGRIINIASVAGMRAVGKGRTAYGTSKGAVIALTRQMAVELCDYGIT 184 Query: 182 VNSVAPGPVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGHV 241 N++APGPVDTPMT+A+HSE+ R Y +PM+RYGTT EIA+AVCYLA+EE+ Y G V Sbjct: 185 ANAIAPGPVDTPMTKALHSEEFRAEYSNAIPMKRYGTTSEIAAAVCYLASEEAGYTNGIV 244 Query: 242 IPVDGGFVAGG 252 +PVDGGF+A G Sbjct: 245 LPVDGGFLAWG 255 >ref|YP_003911142.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1003] gb|ADN61851.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1003] Length = 266 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 150/248 (60%), Positives = 192/248 (77%) Query: 9 RVALVTGGAMGIGASISAQLAAKGHTVLVADINLEAASKTAHALVAAGHRAAALQMDLGS 68 RVALVTGG GIGA+IS QLA GH V + DIN +A+ A +L AAG +A A+++D+ Sbjct: 19 RVALVTGGGAGIGAAISQQLADAGHIVFIGDINTHSANDLAGSLCAAGRKAYAVRLDVSD 78 Query: 69 PEAIAQAFAHIEKDYGRCDVLVNNAGVARTYSFLDYPLDNWLQTMNVNVTGVLLAGQHAA 128 +I +AF+ I+ +GRCD+LVNNAG+A+T+ F+DYP+++W + +VNVTG +L GQ AA Sbjct: 79 ASSIDEAFSAIDAQFGRCDILVNNAGIAKTFPFIDYPVEHWRKVFDVNVTGPMLCGQRAA 138 Query: 129 RLMVSKGWGRIVNISSISGIRAGAGRTAYGTSKAAVIGLTRQMAIELAQYGITVNSVAPG 188 RLM GWGRIVNI+S+SG+RA GRTAYGTSKAAVIGLTRQMAIELA+YGIT N +APG Sbjct: 139 RLMRRAGWGRIVNIASVSGLRASMGRTAYGTSKAAVIGLTRQMAIELAEYGITTNGIAPG 198 Query: 189 PVDTPMTQAMHSEQTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGHVIPVDGGF 248 PVDTPMT +HS+ R++Y R VP RYG DEIAS V +L +E ++Y+ G +PVDGGF Sbjct: 199 PVDTPMTLDLHSQVARDNYTRAVPAGRYGVPDEIASVVAFLCSERASYVNGQTLPVDGGF 258 Query: 249 VAGGVLEI 256 +A GVLEI Sbjct: 259 MAAGVLEI 266 >ref|ZP_03500877.1| short-chain dehydrogenase/reductase SDR [Rhizobium etli Kim 5] Length = 236 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 144/233 (61%), Positives = 183/233 (78%), Gaps = 1/233 (0%) Query: 23 SISAQLAAKGHTVLVADINLEAASKTAHALVAAGHRAAALQMDLGSPEAIAQAFAHIEKD 82 SI+ LA+ G V+VADIN EAA K A L A G RAA + MD+G P++IA+AF+ +EK+ Sbjct: 2 SIAHHLASDGFAVIVADINKEAAEKAADELKAVGLRAAYVPMDVGRPDSIAEAFSTVEKE 61 Query: 83 YGRCDVLVNNAGVARTYSFLDYPLDNWLQTMNVNVTGVLLAGQHAARLMVSKGWGRIVNI 142 +GRCDVLVNNAG+A+T+ F+D+P DNW+ T+N+NVTG +L QHAARLM GWGRI+NI Sbjct: 62 HGRCDVLVNNAGIAKTFPFIDFPYDNWVATININVTGSMLCSQHAARLMRQSGWGRIINI 121 Query: 143 SSISGIRA-GAGRTAYGTSKAAVIGLTRQMAIELAQYGITVNSVAPGPVDTPMTQAMHSE 201 +S++G RA G GRTAYG SKAAVIGLTRQMA ELA YGIT N+VAPGPVDTP+T+A+HS Sbjct: 122 ASVAGERAVGHGRTAYGVSKAAVIGLTRQMAAELAAYGITSNAVAPGPVDTPLTEALHSA 181 Query: 202 QTRESYYRLVPMRRYGTTDEIASAVCYLAAEESAYITGHVIPVDGGFVAGGVL 254 + R +Y +P RRYG EIA+ V +LA+E ++Y+ G VIPVDGGF+A G L Sbjct: 182 EFRATYTAAIPARRYGKPGEIAATVSFLASEGASYVNGAVIPVDGGFLAAGAL 234