BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.4953.p (282 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777201.1| short-chain alcohol dehydrogenase [Herbaspir... 498 e-139 ref|ZP_06688156.1| short chain dehydrogenase/reductase family ox... 278 5e-73 ref|YP_003166830.1| short-chain dehydrogenase/reductase SDR [Can... 276 2e-72 gb|EFV86680.1| dehydrogenase [Achromobacter xylosoxidans C54] 275 4e-72 ref|YP_487926.1| Short-chain dehydrogenase/reductase SDR [Rhodop... 259 3e-67 >ref|YP_003777201.1| short-chain alcohol dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65293.1| short-chain alcohol dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 266 Score = 498 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 252/266 (94%), Positives = 261/266 (98%) Query: 17 MDKLMQDKAIIVTGAGSVGEGWGNGKAAAVLYAREGGRVLAVDRSIEAALETQEIIRREG 76 MDKLMQ KAIIVTGAGSVGEGWGNGKAAAVLYAREGGRVLAVDRSIEAAL+TQ+IIR EG Sbjct: 1 MDKLMQGKAIIVTGAGSVGEGWGNGKAAAVLYAREGGRVLAVDRSIEAALQTQDIIRSEG 60 Query: 77 GVCEVLAADVSRSADVKAIAEAAMSHFGRVDVLHNNVGIAEVGGPVETSEESWNRLVAVN 136 GVCEVLAADVSR+ +VKAIAEAAM HFGRVDVLHNNVGIA+VGGPVETSEESWNRLVAVN Sbjct: 61 GVCEVLAADVSRNTEVKAIAEAAMDHFGRVDVLHNNVGIADVGGPVETSEESWNRLVAVN 120 Query: 137 QTSLFLTHKYVLPIMEKQRKGAIVNISSMAALRWIGFPYLGYTATKAAILAFTKNVAMQY 196 QTSLFLTHK+VLPIMEKQRKGAIVNISS+AALRWIGFPYLGYTATKAAILAFTKNVAMQY Sbjct: 121 QTSLFLTHKHVLPIMEKQRKGAIVNISSLAALRWIGFPYLGYTATKAAILAFTKNVAMQY 180 Query: 197 APMGIRANCVLPGMMDTPMIREPLKASYGGDIEEMRAKRNAQCPMGFMGDAWDVAHASLF 256 APMGIRANCVLPGMMDTPMIREPLKASYGGDIE+MRAKRNAQCPMGFMGDAWDVAHASLF Sbjct: 181 APMGIRANCVLPGMMDTPMIREPLKASYGGDIEQMRAKRNAQCPMGFMGDAWDVAHASLF 240 Query: 257 LASDNARYITGLDMIVDGGLSLRCVG 282 LASD+ARYITGLDMIVDGGLSLRC G Sbjct: 241 LASDHARYITGLDMIVDGGLSLRCAG 266 >ref|ZP_06688156.1| short chain dehydrogenase/reductase family oxidoreductase [Achromobacter piechaudii ATCC 43553] gb|EFF74938.1| short chain dehydrogenase/reductase family oxidoreductase [Achromobacter piechaudii ATCC 43553] Length = 264 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 142/259 (54%), Positives = 188/259 (72%), Gaps = 1/259 (0%) Query: 17 MDKLMQDKAIIVTGAGSVGEGWGNGKAAAVLYAREGGRVLAVDRSIEAALETQEIIRREG 76 M + ++DK +V GAGS G GWGNGKAAA LYAREG RV AVD EAA ET+ +I+ EG Sbjct: 1 MGQRVKDKVALVFGAGSSGPGWGNGKAAAALYAREGARVYAVDVRAEAAEETRRVIQAEG 60 Query: 77 GVCEVLAADVSRSADVKAIAEAAMSHFGRVDVLHNNVGIAEVGGPVETSEESWNRLVAVN 136 G C L ADV++SA ++A+ + GR+D+LHNNVGI E+G P+E SEESW+R++ N Sbjct: 61 GHCHALVADVTQSAQIQAVVARMLDEAGRIDILHNNVGITEMGDPIEASEESWHRVLDTN 120 Query: 137 QTSLFLTHKYVLPIMEKQRKGAIVNISSMAALRWIGFPYLGYTATKAAILAFTKNVAMQY 196 T +FLT K+VLP M Q G+I+NISS+A+++ +PY Y A KA + T+++A++Y Sbjct: 121 LTGVFLTCKHVLPTMLAQGGGSIINISSLASIQVNTYPYTSYYAAKAGLNHLTRSLAVRY 180 Query: 197 APMGIRANCVLPGMMDTPMIREPLKASYGGDIEEMRAKRNAQCPMGFMGDAWDVAHASLF 256 AP IR N VLPG++DTP+I + + D+EEMR +RNA PMG MGDAWDVAHA+LF Sbjct: 181 APDNIRVNAVLPGVIDTPLIYRQIAGQF-QDVEEMRRRRNAASPMGRMGDAWDVAHAALF 239 Query: 257 LASDNARYITGLDMIVDGG 275 LASD A+YITG+ + VDGG Sbjct: 240 LASDEAKYITGVCLPVDGG 258 >ref|YP_003166830.1| short-chain dehydrogenase/reductase SDR [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV34901.1| short-chain dehydrogenase/reductase SDR [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 267 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 145/261 (55%), Positives = 189/261 (72%), Gaps = 2/261 (0%) Query: 21 MQDKAIIVTGAGSVGEGWGNGKAAAVLYAREGGRVLAVDRSIEAALETQEIIRREGGVCE 80 +QDK IVTG+GSVG GWGNGKA +VL+AREG +V+ VD EA TQ II EGG Sbjct: 5 LQDKVAIVTGSGSVGPGWGNGKAMSVLFAREGAKVVGVDIDAEAGAATQRIIDDEGGTGI 64 Query: 81 VLAADVSRSADVKAIAEAAMSHFGRVDVLHNNVGIAEVGGPVETSEESWNRLVAVNQTSL 140 L ADV+R+ADV+ + AA+ +GR+D+L NNVGIA VGGP E E +W+RL+ VN S Sbjct: 65 SLVADVTRAADVERLVAAAIDTYGRIDILVNNVGIAIVGGPAELDEATWDRLMTVNVKST 124 Query: 141 FLTHKYVLPIMEKQRKGAIVNISSMAALRWIGFPYLGYTATKAAILAFTKNVAMQYAPMG 200 +LT +VLP+M +Q GAIVN +S+A L W G Y Y A+K A++A T+ +A+++AP G Sbjct: 125 YLTCHHVLPVMIRQHAGAIVNNASVAVLGWAGVNYGFYAASKGAMVAMTRTMAIRHAPDG 184 Query: 201 IRANCVLPGMMDTPMIREPLKASYG--GDIEEMRAKRNAQCPMGFMGDAWDVAHASLFLA 258 IRANCVLPG+M+TP++ L YG GDI + R+AQCP+G MGDAWD A+A+LFLA Sbjct: 185 IRANCVLPGLMNTPLVHAALTRVYGEEGDIANLIRTRDAQCPLGHMGDAWDTAYAALFLA 244 Query: 259 SDNARYITGLDMIVDGGLSLR 279 SD A+YIT +++VDGGLS R Sbjct: 245 SDEAKYITATELVVDGGLSAR 265 >gb|EFV86680.1| dehydrogenase [Achromobacter xylosoxidans C54] Length = 264 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 148/266 (55%), Positives = 187/266 (70%), Gaps = 3/266 (1%) Query: 17 MDKLMQDKAIIVTGAGSVGEGWGNGKAAAVLYAREGGRVLAVDRSIEAALETQEIIRREG 76 M + MQ K +V GAGS G GW NG+AAA LYAREG V AVD +E+A ET+ II EG Sbjct: 1 MGQRMQGKTALVFGAGSSGPGWSNGRAAAALYAREGAHVFAVDLRVESAEETRRIILDEG 60 Query: 77 GVCEVLAADVSRSADVKAIAEAAMSHFGRVDVLHNNVGIAEVGGPVETSEESWNRLVAVN 136 G C LAADV+ SA + A A + GR+DVLHNNVGI E+G P+E SEESW+R++ N Sbjct: 61 GRCTALAADVTDSAQILAAVRAMQAEAGRIDVLHNNVGITEMGDPIEASEESWHRVMDTN 120 Query: 137 QTSLFLTHKYVLPIMEKQRKGAIVNISSMAALRWIGFPYLGYTATKAAILAFTKNVAMQY 196 T +FLT K+VLP+M Q G+IVNISS+A+++ +PY Y A KA + T+ +A++Y Sbjct: 121 LTGVFLTCKHVLPVMLAQGGGSIVNISSLASIQVNTYPYTSYYAAKAGLNHLTRALAVRY 180 Query: 197 APMGIRANCVLPGMMDTPMIREPLKASYGGDIEEMRAKRNAQCPMGFMGDAWDVAHASLF 256 AP IR N VLPG+MDTP+I + + D+EEMR +RNA PMG MGDAWDVAHA+LF Sbjct: 181 APDNIRVNAVLPGVMDTPLIYTQIAGQF-EDVEEMRRRRNAASPMGRMGDAWDVAHAALF 239 Query: 257 LASDNARYITGLDMIVDGGLSLRCVG 282 LASD A+YITG+ + VDGG S C G Sbjct: 240 LASDEAKYITGVCLPVDGGKS--CAG 263 >ref|YP_487926.1| Short-chain dehydrogenase/reductase SDR [Rhodopseudomonas palustris HaA2] gb|ABD09015.1| Short-chain dehydrogenase/reductase SDR [Rhodopseudomonas palustris HaA2] Length = 290 Score = 259 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 150/281 (53%), Positives = 205/281 (72%), Gaps = 5/281 (1%) Query: 2 AASLPVACWKSERTLMDKLMQDKAIIVTGAGSVGEGWGNGKAAAVLYAREGGRVLAVDRS 61 A +LP + ++T M +L + K +V GAGS+G GWGNGKA AV +AREG +V VDR+ Sbjct: 10 ATTLP-KTQRRKKTRMPRL-EGKTALVVGAGSIGPGWGNGKATAVTFAREGAQVFCVDRN 67 Query: 62 IEAALETQEIIRREGGVCEVLAADVSRSADVKAIAEAAMSHFGRVDVLHNNVGIAEVGGP 121 +AA ET +II+ EGG AADVSR+ADV+A+ +A + +G +DVL NNVGIAE GG Sbjct: 68 RDAAQETVDIIKSEGGRAIAFAADVSRAADVEAMVKACVDAWGGIDVLDNNVGIAETGGV 127 Query: 122 VETSEESWNRLVAVNQTSLFLTHKYVLPIMEKQRKGAIVNISSMAALRWIGFPYLGYTAT 181 VE SE W+R+ AVN S FL K+V+PIM++Q G+I+NISS+A++R +G Y+ Y A+ Sbjct: 128 VEVSEAEWDRVFAVNLKSAFLAMKHVVPIMQRQGGGSIINISSIASIRHLGISYVTYAAS 187 Query: 182 KAAILAFTKNVAMQYAPMGIRANCVLPGMMDTPMIREP--LKASY-GGDIEEMRAKRNAQ 238 KAA+ A T+ A++YA +R NC+LPG+M TPM+ L ASY GD+E M R+AQ Sbjct: 188 KAAMNAMTRTTAVEYAKDHVRVNCILPGLMKTPMVAHSAGLAASYAAGDVEAMWRARDAQ 247 Query: 239 CPMGFMGDAWDVAHASLFLASDNARYITGLDMIVDGGLSLR 279 PMG MGDAWDVA+A+LFLASD ++Y+TGL+++VDGGL+L+ Sbjct: 248 VPMGHMGDAWDVANAALFLASDESKYVTGLELVVDGGLTLK 288